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S. Highlander · SciRah

Researcher profile · Semantic Scholar

S. Highlander

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S. Highlander — researcher profile on SciRah

h-index: 38
Works: 90
Citations: 32K

Most-cited papers

Structure, Function and Diversity of the Healthy Human Microbiome
C. Huttenhower, D. Gevers, R. Knight, Sahar Abubucker +244 more
2012Nature11K citations Open access
Semantic Scholar
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
J. Kozich, S. Westcott, N. Baxter, S. Highlander +1 more
2013Applied and Environmental Microbiology6,427 citations Open access
Semantic Scholar
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons.
B. Haas, D. Gevers, A. Earl, M. Feldgarden +11 more
2011Genome Research3,356 citations Open access
Semantic Scholar
A framework for human microbiome research
B. Methé, K. Nelson, Mihai Pop, H. Creasy +244 more
2012Nature2,439 citations Open access
Semantic Scholar
Gut microbiome based metagenomic signature for non-invasive detection of advanced fibrosis in human nonalcoholic fatty liver disease
R. Loomba, V. Seguritan, W. Li, T. Long +17 more
2017Cell Metabolism777 citations Open access
Semantic Scholar
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P. Yilmaz, R. Kottmann, D. Field, R. Knight +94 more
2011Nature Biotechnology773 citations Open access
Semantic Scholar
A Catalog of Reference Genomes from the Human Microbiome
K. Nelson, G. Weinstock, S. Highlander, K. Worley +79 more
2010Science720 citations Open access
Semantic Scholar
GASTROINTESTINAL MICROBIOME SIGNATURES OF PEDIATRIC PATIENTS WITH IRRITABLE BOWEL SYNDROME
D. Saulnier, Kevin P. Riehle, Toni-Ann Mistretta, M. Diaz +12 more
2011Gastroenterology643 citations Open access
Semantic Scholar
Metagenomic Pyrosequencing and Microbial Identification
J. Petrosino, S. Highlander, R. Luna, R. Gibbs +1 more
2009Clinical Chemistry586 citations Open access
Semantic Scholar
Nivolumab plus ipilimumab with or without live bacterial supplementation in metastatic renal cell carcinoma: a randomized phase 1 trial
N. Dizman, L. Meza, P. Bergerot, Marice B. Alcantara +23 more
2022Nature Medicine456 citations Open access
Semantic Scholar
Genome Project Standards in a New Era of Sequencing
P. Chain, D. Grafham, R. Fulton, Michael G. Fitzgerald +41 more
2009Science435 citations Open access
Semantic Scholar
Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease
R. Loomba, V. Seguritan, Wei-Zhong Li, T. Long +17 more
2019Cell Metabolism412 citations Open access
Semantic Scholar
Evaluation of 16S rDNA-Based Community Profiling for Human Microbiome Research
D. Ward, D. Gevers, G. Giannoukos, A. Earl +63 more
2012PLoS ONE295 citations Open access
Semantic Scholar
Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus
S. Highlander, K. Hulten, X. Qin, Huai-Yang Jiang +29 more
2007BMC Microbiology264 citations Open access
Semantic Scholar
Complete Genome Sequence of Rickettsia typhi and Comparison with Sequences of Other Rickettsiae
Michael P. McLeod, X. Qin, S. Karpathy, Jason Gioia +18 more
2004Journal of Bacteriology243 citations Open access
Semantic Scholar
Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system
P. Schloss, Matthew L. Jenior, C. Koumpouras, S. Westcott +1 more
2016PeerJ223 citations Open access
Semantic Scholar
Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF
A. Bourgogne, D. Garsin, X. Qin, Kavindra V. Singh +24 more
2008Genome Biology221 citations Open access
Semantic Scholar
Host Genetic control of the oral microbiome in Health and Disease
A. Gomez, J. Espinoza, D. Harkins, P. Leong +12 more
2017Cell Host and Microbe194 citations Open access
Semantic Scholar
Library preparation methodology can influence genomic and functional predictions in human microbiome research
Marcus B. Jones, S. Highlander, Ericka Anderson, Wei-Zhong Li +10 more
2015Proceedings of the National Academy of Sciences of the United States of America190 citations Open access
Semantic Scholar
Stool Microbiome Profiling of Patients with Metastatic Renal Cell Carcinoma Receiving Anti-PD-1 Immune Checkpoint Inhibitors.
N. Salgia, P. Bergerot, M. Maia, N. Dizman +7 more
2020European Urology171 citations
Semantic Scholar
Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes
X. Qin, J. Galloway-Peña, J. Sillanpaa, J. Roh +17 more
2012BMC Microbiology161 citations Open access
Semantic Scholar
Phylogenomics and the Dynamic Genome Evolution of the Genus Streptococcus
V. P. Richards, Sara R. Palmer, P. P. Pavinski Bitar, X. Qin +5 more
2014Genome Biology and Evolution147 citations Open access
Semantic Scholar
Characterization of the human gut microbiome during travelers' diarrhea
Bonnie P. Youmans, N. Ajami, Zhi-Dong Jiang, F. Campbell +4 more
2015Gut microbes138 citations Open access
Semantic Scholar
Paradoxical DNA Repair and Peroxide Resistance Gene Conservation in Bacillus pumilus SAFR-032
Jason Gioia, Shailaja Yerrapragada, X. Qin, Huai-Yang Jiang +37 more
2007PLoS ONE127 citations Open access
Semantic Scholar
Gastrointestinal microbial populations can distinguish pediatric and adolescent Acute Lymphoblastic Leukemia (ALL) at the time of disease diagnosis
Seesandra V. Rajagopala, S. Yooseph, D. Harkins, K. Moncera +7 more
2016BMC Genomics112 citations Open access
Semantic Scholar
Chromosome Rearrangement and Diversification of Francisella tularensis Revealed by the Type B (OSU18) Genome Sequence
J. Petrosino, Qin Xiang, S. Karpathy, Huai-Yang Jiang +13 more
2006Journal of Bacteriology107 citations Open access
Semantic Scholar
The Genome Sequence of Mannheimia haemolytica A1: Insights into Virulence, Natural Competence, and Pasteurellaceae Phylogeny
Jason Gioia, X. Qin, Huai-Yang Jiang, K. Clinkenbeard +13 more
2006Journal of Bacteriology100 citations Open access
Semantic Scholar
From Prediction to Function Using Evolutionary Genomics: Human-Specific Ecotypes of Lactobacillus reuteri Have Diverse Probiotic Functions
J. Spinler, Amrita A. Sontakke, E. Hollister, S. Venable +8 more
2014Genome Biology and Evolution98 citations Open access
Semantic Scholar
Inactivation of Pasteurella(Mannheimia) haemolytica Leukotoxin Causes Partial Attenuation of Virulence in a Calf Challenge Model
S. Highlander, N. Fedorova, D. Dusek, R. Panciera +2 more
2000Infection and Immunity95 citations Open access
Semantic Scholar
DNA Sequence of the Pasteurella haemolytica Leukotoxin Gene Cluster
S. Highlander, Monjula Chidambaram, M. Engler, G. Weinstock
1989DNA94 citations
Semantic Scholar
Supragingival Plaque Microbiome Ecology and Functional Potential in the Context of Health and Disease
J. Espinoza, D. Harkins, M. Torralba, A. Gomez +11 more
2018mBio90 citations Open access
Semantic Scholar
Genome Sequence of Fusobacterium nucleatum Subspecies Polymorphum — a Genetically Tractable Fusobacterium
S. Karpathy, X. Qin, Jason Gioia, Huai-Yang Jiang +7 more
2007PLoS ONE83 citations Open access
Semantic Scholar
Randomized trial assessing impact of probiotic supplementation on gut microbiome and clinical outcome from targeted therapy in metastatic renal cell carcinoma
N. Dizman, J. Hsu, P. Bergerot, J. Gillece +5 more
2020Cancer Medicine74 citations Open access
Semantic Scholar
Control of pT181 replication I. The pT181 copy control function acts by inhibiting the synthesis of a replication protein.
Richard P. Novick, G. Adler, S. Projan, S. Carleton +4 more
1984EMBO Journal70 citations Open access
Semantic Scholar
A Phase II Clinical Trial of Pembrolizumab and Enobosarm in Patients with Androgen Receptor-Positive Metastatic Triple-Negative Breast Cancer.
Yuan Yuan, Jin-Sun Lee, S. Yost, P. Frankel +16 more
2020The Oncologist68 citations Open access
Semantic Scholar
Control of pT181 replication II. Mutational analysis.
S. Carleton, S. Projan, S. Highlander, Soraya M. Moghazeh +1 more
1984EMBO Journal68 citations Open access
Semantic Scholar
A robust ambient temperature collection and stabilization strategy: Enabling worldwide functional studies of the human microbiome
Ericka Anderson, Wei-Zhong Li, Niels Klitgord, S. Highlander +7 more
2016Scientific Reports58 citations Open access
Semantic Scholar
TRANSMISSION OF MANNHEIMIA HAEMOLYTICA FROM DOMESTIC SHEEP (OVIS ARIES) TO BIGHORN SHEEP (OVIS CANADENSIS): UNEQUIVOCAL DEMONSTRATION WITH GREEN FLUORESCENT PROTEIN-TAGGED ORGANISMS
P. Lawrence, S. Shanthalingam, R. Dassanayake, R. Subramaniam +8 more
2010Journal of Wildlife Diseases45 citations Open access
Semantic Scholar
Family SES Is Associated with the Gut Microbiome in Infants and Children
C. Lewis, K. Bonham, S. McCann, Alexandra Volpe +8 more
2021Microorganisms35 citations Open access
Semantic Scholar
Molecular and Evolutionary Analysis of NEAr-Iron Transporter (NEAT) Domains
E. Honsa, A. Maresso, S. Highlander
2014PLoS ONE35 citations Open access
Semantic Scholar
High throughput sequencing methods for microbiome profiling: application to food animal systems
S. Highlander
2012Animal Health Research Reviews35 citations
Semantic Scholar
Replication control for pT181, an indirectly regulated plasmid.
Richard P. Novick, S. Projan, C. Kumar, S. Carleton +3 more
1985Basic life sciences33 citations
Semantic Scholar
Extreme Sensory Complexity Encoded in the 10-Megabase Draft Genome Sequence of the Chromatically Acclimating Cyanobacterium Tolypothrix sp. PCC 7601
Shailaja Yerrapragada, Animesh Shukla, Kymberlie Hallsworth-Pepin, Kwangmin Choi +15 more
2015Genome Announcements27 citations Open access
Semantic Scholar
Development and accuracy of quantitative real-time polymerase chain reaction assays for detection and quantification of enterotoxigenic Escherichia coli (ETEC) heat labile and heat stable toxin genes in travelers' diarrhea samples.
Bonnie P. Youmans, N. Ajami, Zhi-Dong Jiang, J. Petrosino +2 more
2014American Journal of Tropical Medicine and Hygiene25 citations Open access
Semantic Scholar
Plasmid repopulation kinetics in Staphylococcus aureus.
S. Highlander, Richard P. Novick
1987Plasmid25 citations
Semantic Scholar
Analysis of Gut Microbiome Using Explainable Machine Learning Predicts Risk of Diarrhea Associated With Tyrosine Kinase Inhibitor Neratinib: A Pilot Study
Chi-Wah Wong, S. Yost, Jin-Sun Lee, J. Gillece +6 more
2021Frontiers in Oncology24 citations Open access
Semantic Scholar
Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers’ diarrhea
Qi-Yun Zhu, C. Dupont, Marcus B. Jones, Kevin M. Pham +3 more
2018Microbiome22 citations Open access
Semantic Scholar
Ultrastructural characterization of apoptosis in bovine lymphocytes exposed to Pasteurella haemolytica leukotoxin.
Yude Sun, K. Clinkenbeard, C. Ownby, L. Cudd +2 more
2000American Journal of Veterinary Research22 citations Open access
Semantic Scholar
Sequencing 16 S rRNA gene fragments using the PacBio SMRT DNA sequencing system
P. Schloss, S. Westcott, Matthew L. Jenior, S. Highlander
201720 citations
Semantic Scholar
Encyclopedia of Metagenomics
S. Highlander, F. Rodríguez-Valera, B. White
2015Springer US20 citations
Semantic Scholar

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