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B. Methé · SciRah

Researcher profile · Semantic Scholar

B. Methé

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B. Methé — researcher profile on SciRah

h-index: 52
Works: 153
Citations: 32K

Most-cited papers

Structure, Function and Diversity of the Healthy Human Microbiome
C. Huttenhower, D. Gevers, R. Knight, Sahar Abubucker +244 more
2012Nature11K citations Open access
Semantic Scholar
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons.
B. Haas, D. Gevers, A. Earl, M. Feldgarden +11 more
2011Genome Research3,356 citations Open access
Semantic Scholar
A framework for human microbiome research
B. Methé, K. Nelson, Mihai Pop, H. Creasy +244 more
2012Nature2,439 citations Open access
Semantic Scholar
Antibiotics in early life alter the murine colonic microbiome and adiposity
Ilseung Cho, S. Yamanishi, L. Cox, B. Methé +9 more
2012Nature1,530 citations Open access
Semantic Scholar
Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome
Sahar Abubucker, N. Segata, Johannes Goll, Alyxandria M. Schubert +13 more
2012PLoS Comput. Biol.1,011 citations Open access
Semantic Scholar
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P. Yilmaz, R. Kottmann, D. Field, R. Knight +94 more
2011Nature Biotechnology773 citations Open access
Semantic Scholar
A Catalog of Reference Genomes from the Human Microbiome
K. Nelson, G. Weinstock, S. Highlander, K. Worley +79 more
2010Science720 citations Open access
Semantic Scholar
The Human Microbiome Project: A Community Resource for the Healthy Human Microbiome
D. Gevers, R. Knight, J. Petrosino, Katherine H. Huang +6 more
2012PLoS Biology469 citations Open access
Semantic Scholar
Community differentiation of the cutaneous microbiota in psoriasis
A. Alekseyenko, G. Perez-Perez, Anita Desouza, B. Strober +5 more
2013Microbiome405 citations Open access
Semantic Scholar
Exploring deep microbial life in coal-bearing sediment down to ~2.5 km below the ocean floor
F. Inagaki, K. Hinrichs, Y. Kubo, M. Bowles +42 more
2015Science389 citations Open access
Semantic Scholar
Evaluation of 16S rDNA-Based Community Profiling for Human Microbiome Research
D. Ward, D. Gevers, G. Giannoukos, A. Earl +63 more
2012PLoS ONE295 citations Open access
Semantic Scholar
Analyses of the Microbial Diversity across the Human Microbiome
Kelvin Li, Monika Bihan, S. Yooseph, B. Methé
2012PLoS ONE270 citations Open access
Semantic Scholar
Analyses of the Stability and Core Taxonomic Memberships of the Human Microbiome
Kelvin Li, Monika Bihan, B. Methé
2013PLoS ONE238 citations Open access
Semantic Scholar
Intractable Coronavirus Disease 2019 (COVID-19) and Prolonged Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Replication in a Chimeric Antigen Receptor-Modified T-Cell Therapy Recipient: A Case Study
M. Hensley, W. Bain, J. Jacobs, Sham Nambulli +29 more
2021Clinical Infectious Diseases122 citations Open access
Semantic Scholar
COVID-19 versus Non–COVID-19 Acute Respiratory Distress Syndrome: Comparison of Demographics, Physiologic Parameters, Inflammatory Biomarkers, and Clinical Outcomes
W. Bain, Hao-Pu Yang, F. Shah, Tomeka L Suber +22 more
2021Annals of the American Thoracic Society122 citations Open access
Semantic Scholar
SARS-CoV-2 Viremia is Associated with COVID-19 Severity and Predicts Clinical Outcomes.
J. Jacobs, W. Bain, Asma Naqvi, Brittany Staines +23 more
2021Clinical Infectious Diseases111 citations Open access
Semantic Scholar
Comparative genome analysis of 19 Ureaplasma urealyticum and Ureaplasma parvum strains
V. Paralanov, Jin Lu, L. Duffy, D. Crabb +8 more
2012BMC Microbiology106 citations Open access
Semantic Scholar
The nonfermentable dietary fiber hydroxypropyl methylcellulose modulates intestinal microbiota
L. Cox, Ilseung Cho, S. A. Young, W. H. Kerr Anderson +8 more
2013The FASEB Journal93 citations Open access
Semantic Scholar
Metagenomic identification of severe pneumonia pathogens in mechanically-ventilated patients: a feasibility and clinical validity study
Libing Yang, G. Haidar, H. Zia, R. Nettles +11 more
2019Respiratory Research92 citations Open access
Semantic Scholar
Microbiome disturbance and resilience dynamics of the upper respiratory tract during influenza A virus infection
D. Kaul, Raveen Rathnasinghe, M. Ferrés, G. Tan +15 more
2020Nature Communications89 citations Open access
Semantic Scholar
Respiratory Tract Dysbiosis is Associated With Worse Outcomes in Mechanically-Ventilated Patients.
G. Kitsios, Hao-Pu Yang, Libing Yang, S. Qin +11 more
2020American Journal of Respiratory and Critical Care Medicine88 citations Open access
Semantic Scholar
Complete Genome Sequence of Mycoplasma bovis Type Strain PG45 (ATCC 25523)
K. Wise, M. Calcutt, M. F. Foecking, K. Röske +2 more
2010Infection and Immunity84 citations Open access
Semantic Scholar
Respiratory Microbiome Profiling for Etiologic Diagnosis of Pneumonia in Mechanically Ventilated Patients
G. Kitsios, A. Fitch, D. Manatakis, S. Rapport +12 more
2018Frontiers in Microbiology75 citations Open access
Semantic Scholar
Signature changes in gut microbiome are associated with increased susceptibility to HIV-1 infection in MSM
Yue Chen, Huang Lin, M. Cole, A. Morris +9 more
2021Microbiome73 citations Open access
Semantic Scholar
The administration of intranasal live attenuated influenza vaccine induces changes in the nasal microbiota and nasal epithelium gene expression profiles
Y. Tarabichi, K. Li, S. Hu, C. Nguyen +8 more
2015Microbiome72 citations Open access
Semantic Scholar
A prospective cohort analysis of gut microbial co-metabolism in Alaska Native and rural African people at high and low risk of colorectal cancer.
S. Ocvirk, Annette S. Wilson, J. Posma, Jia V. Li +23 more
2019American Journal of Clinical Nutrition71 citations Open access
Semantic Scholar
HIV-1 and bacterial pneumonia in the era of antiretroviral therapy.
L. Segal, B. Methé, A. Nolan, Y. Hoshino +4 more
2011Proceedings of the American Thoracic Society70 citations Open access
Semantic Scholar
Intestinal injury and gut permeability in sickle cell disease
D. Dutta, B. Methé, S. Amar, A. Morris +1 more
2019Journal of Translational Medicine58 citations Open access
Semantic Scholar
Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer
A. L. N'guessan, H. Elifantz, K. Nevin, P. Mouser +8 more
2010The ISME Journal58 citations Open access
Semantic Scholar
Intestinal microbiome analysis revealed dysbiosis in sickle cell disease
Seah H. Lim, A. Morris, Kelvin Li, A. Fitch +5 more
2018American journal of hematology/oncology53 citations Open access
Semantic Scholar
Lung transplantation for idiopathic pulmonary fibrosis enriches for individuals with telomere-mediated disease
J. Alder, R. Sutton, C. Iasella, M. Nouraie +20 more
2021The Journal of Heart and Lung Transplantation51 citations Open access
Semantic Scholar
Alterations in Oral Microbiota in HIV are Related to Decreased Pulmonary Function.
Libing Yang, D. Dunlap, S. Qin, A. Fitch +8 more
2020American Journal of Respiratory and Critical Care Medicine48 citations Open access
Semantic Scholar
The Microbiome in Lung Explants of Idiopathic Pulmonary Fibrosis (MiLEs-IPF): a case-control study in patients with end-stage fibrosis.
G. Kitsios, M. Rojas, D. Kass, A. Fitch +11 more
2017Thorax45 citations Open access
Semantic Scholar
Distinctive gene and protein characteristics of extremely piezophilic Colwellia
Logan M. Peoples, Than S. Kyaw, Juan A. Ugalde, K. Mullane +5 more
2020bioRxiv42 citations Open access
Semantic Scholar
Adaptation and genomic erosion in fragmented Pseudomonas aeruginosa populations in the sinuses of people with cystic fibrosis
C. R. Armbruster, C. W. Marshall, A. Garber, J. Melvin +14 more
2021Cell Reports37 citations Open access
Semantic Scholar
De Novo Assembly of the Complete Genome of an Enhanced Electricity-Producing Variant of Geobacter sulfurreducens Using Only Short Reads
Harish Nagarajan, J. Butler, A. Klimes, Yu Qiu +7 more
2010PLoS ONE37 citations Open access
Semantic Scholar
The microbiome of pediatric patients with chronic rhinosinusitis
Amanda L. Stapleton, Amber D. Shaffer, A. Morris, Kelvin Li +2 more
2020International Forum of Allergy and Rhinology35 citations Open access
Semantic Scholar
Rectal Swabs from Critically Ill Patients Provide Discordant Representations of the Gut Microbiome Compared to Stool Samples
Katherine Fair, D. Dunlap, A. Fitch, T. Bogdanovich +4 more
2019Msphere33 citations Open access
Semantic Scholar
Genome Enablement of the Notothenioidei: Genome Size Estimates from 11 Species and BAC Libraries from 2 Representative Taxa
H. Detrich, Andrew B. Stuart, M. Schoenborn, S. K. Parker +2 more
2010Journal of Experimental Zoology Part B: Molecular and Developmental Evolution31 citations Open access
Semantic Scholar
Intestinal IL-17R Signaling Constrains IL-18-Driven Liver Inflammation by the Regulation of Microbiome-Derived Products
Patricia Castillo-dela Cruz, Alanna G. Wanek, Pawan Kumar, Xiaojing An +10 more
2019Cell Reports26 citations Open access
Semantic Scholar
Invasive non-typhoidal Salmonella in sickle cell disease in Africa: is increased gut permeability the missing link?
Seah H. Lim, B. Methé, B. Knoll, A. Morris +1 more
2018Journal of Translational Medicine26 citations Open access
Semantic Scholar
Topographic Heterogeneity of Lung Microbiota in End-Stage Idiopathic Pulmonary Fibrosis: The Microbiome in Lung Explants-2 (MiLEs-2) Study.
E. Valenzi, Hao-Pu Yang, J. Sembrat, Libing Yang +14 more
2020Thorax24 citations Open access
Semantic Scholar
Complete Genome Sequences of Mycoplasma leachii Strain PG50T and the Pathogenic Mycoplasma mycoides subsp. mycoides Small Colony Biotype Strain Gladysdale
K. Wise, M. Calcutt, M. F. Foecking, R. Madupu +7 more
2012Journal of Bacteriology23 citations Open access
Semantic Scholar
ANDES: Statistical tools for the ANalyses of DEep Sequencing
Kelvin Li, E. Venter, S. Yooseph, T. Stockwell +4 more
2010BMC Research Notes23 citations Open access
Semantic Scholar
Plasma 1,3-β-d-glucan levels predict adverse clinical outcomes in critical illness
G. Kitsios, D. Kotok, Hao-Pu Yang, M. Finkelman +16 more
2021JCI Insight20 citations Open access
Semantic Scholar
Effects of rifaximin on circulating aged neutrophils in sickle cell disease
D. Dutta, B. Methé, A. Morris, Seah H. Lim
2019American journal of hematology/oncology16 citations Open access
Semantic Scholar
Antibodies targeting conserved non-canonical antigens and endemic coronaviruses associate with favorable outcomes in severe COVID-19
S. P. Peddireddy, Syed A. Rahman, A. Cillo, G. M. Vijay +15 more
2022bioRxiv15 citations Open access
Semantic Scholar
The emergence of microbiome centres
J. B. Martiny, Katrine L Whiteson, B. Bohannan, L. David +24 more
2019Nature Microbiology15 citations Open access
Semantic Scholar
Low Diversity and Instability of the Sinus Microbiota over Time in Adults with Cystic Fibrosis
C. R. Armbruster, Kelvin Li, M. Kiedrowski, A. Zemke +13 more
2022bioRxiv14 citations Open access
Semantic Scholar
People critically ill with COVID-19 exhibit peripheral immune profiles predictive of mortality and reflective of SARS-CoV-2 lung viral burden
A. Cillo, Ashwin Somasundaram, Shan Feng, Carly Cardello +25 more
2021Cell Reports Medicine14 citations Open access
Semantic Scholar

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A. Morris×20
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A. Morris — researcher profile on SciRah
Kelvin Li×16
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Kelvin Li — researcher profile on SciRah
A. Fitch×13
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A. Fitch — researcher profile on SciRah
G. Kitsios×12
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B. McVerry — researcher profile on SciRah

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D. Gevers — researcher profile on SciRah

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M. Blaser — researcher profile on SciRah

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B. Birren — researcher profile on SciRah

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