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Alexander Botzki · SciRah

Researcher profile · Semantic Scholar

Alexander Botzki

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Alexander Botzki — researcher profile on SciRah

h-index: 17
Works: 46
Citations: 2,214

Most-cited papers

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics
M. Van Bel, Tim Diels, Emmelien Vancaester, Lukasz Kreft +4 more
2017Nucleic Acids Res.407 citations Open access
Semantic Scholar
PhyD3: a phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization
Łukasz Kreft, Alexander Botzki, Frederik Coppens, K. Vandepoele +1 more
2017bioRxiv287 citations Open access
Semantic Scholar
ADAR1 prevents autoinflammation by suppressing spontaneous ZBP1 activation
Richard de Reuver, S. Verdonck, E. Dierick, Josephine Nemegeer +12 more
2022Nature221 citations Open access
Semantic Scholar
Predicting and improving complex beer flavor through machine learning
Michiel Schreurs, Supinya Piampongsant, Miguel Roncoroni, Lloyd Cool +9 more
2024Nature Communications139 citations Open access
Semantic Scholar
PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants
M. Van Bel, F. Silvestri, Eric M. Weitz, Lukasz Kreft +3 more
2021Nucleic Acids Res.139 citations Open access
Semantic Scholar
ConTra v3: a tool to identify transcription factor binding sites across species, update 2017
Łukasz Kreft, A. Soete, P. Hulpiau, Alexander Botzki +2 more
2017Nucleic Acids Res.123 citations Open access
Semantic Scholar
ADAR1 interaction with Z-RNA promotes editing of endogenous double-stranded RNA and prevents MDA5-dependent immune activation
Richard de Reuver, E. Dierick, Bartosz Wiernicki, K. Staes +8 more
2020bioRxiv111 citations Open access
Semantic Scholar
l-Ascorbic Acid 6-Hexadecanoate, a Potent Hyaluronidase Inhibitor
Alexander Botzki, D. Rigden, S. Braun, M. Nukui +6 more
2004Journal of Biological Chemistry106 citations Open access
Semantic Scholar
The Plant PTM Viewer, a central resource for exploring plant protein modifications.
P. Willems, Alison Horne, T. van Parys, S. Goormachtig +4 more
2019The Plant Journal98 citations Open access
Semantic Scholar
Bis(1H-2-indolyl)methanones as a novel class of inhibitors of the platelet-derived growth factor receptor kinase.
S. Mahboobi, S. Teller, Herwig Pongratz, Harald Hufsky +10 more
2002Journal of Medicinal Chemistry70 citations Open access
Semantic Scholar
ConTra v3: a tool to identify transcription factor binding sites across species, update 2016
Łukasz Kreft, P. de Bleser, P. Hulpiau, A. Soete +2 more
201661 citations Open access
Semantic Scholar
The TriForC database: a comprehensive up-to-date resource of plant triterpene biosynthesis
K. Miettinen, Sabrina Iñigo, Lukasz Kreft, J. Pollier +5 more
2017Nucleic Acids Res.60 citations Open access
Semantic Scholar
TRAPID 2.0: a web application for taxonomic and functional analysis of de novo transcriptomes
François Bucchini, A. Del Cortona, Łukasz Kreft, Alexander Botzki +2 more
2020bioRxiv59 citations Open access
Semantic Scholar
A Single Amino Acid Exchange Inverts Susceptibility of Related Receptor Tyrosine Kinases for the ATP Site Inhibitor STI-571* 210
F. Böhmer, L. Karagyozov, Andrea Uecker, H. Serve +3 more
2003Journal of Biological Chemistry52 citations Open access
Semantic Scholar
AutoSpill is a principled framework that simplifies the analysis of multichromatic flow cytometry data
C. Roca, O. Burton, Václav Gergelits, T. Prezzemolo +8 more
2021Nature Communications45 citations Open access
Semantic Scholar
Design of benzimidazole- and benzoxazole-2-thione derivatives as inhibitors of bacterial hyaluronan lyase.
S. Braun, Alexander Botzki, Sunnhild Salmen, C. Textor +3 more
2011European journal of medicinal chemistry40 citations Open access
Semantic Scholar
The Interleukin 1 (IL-1) Receptor Accessory Protein Toll/IL-1 Receptor Domain
Jürgen Radons, S. Dove, D. Neumann, R. Altmann +3 more
2003Journal of Biological Chemistry35 citations Open access
Semantic Scholar
Design of new benzoxazole-2-thione-derived inhibitors of Streptococcus pneumoniae hyaluronan lyase: structure of a complex with a 2-phenylindole.
D. Rigden, Alexander Botzki, M. Nukui, R. B. Mewbourne +7 more
2006Glycobiology16 citations
Semantic Scholar
The Interleukin 1 (IL-1) Receptor Accessory Protein Toll/IL-1 Receptor Domain ANALYSIS OF PUTATIVE INTERACTION SITES BY IN VITRO MUTAGENESIS AND MOLECULAR MODELING*
J. Radons, S. Dove, D. Neumann, R. Altmann +3 more
200316 citations
Semantic Scholar
The antigenic landscape of human influenza N2 neuraminidases from 2009 until 2017
J. P. Catani, A. Smet, T. Ysenbaert, M. Vuylsteke +15 more
2024bioRxiv14 citations Open access
Semantic Scholar
Systematic review and meta-analysis of genome-wide pooled CRISPR screens to identify host factors involved in influenza A virus infection
Annabel Maes, Alexander Botzki, J. Mathys, F. Impens +1 more
2024Journal of Virology13 citations
Semantic Scholar
Acinetobase: the comprehensive database and repository of Acinetobacter strains
Adam Valček, James H. Collier, Alexander Botzki, C. Van der Henst
2022bioRxiv12 citations Open access
Semantic Scholar
A framework to assess the quality and impact of bioinformatics training across ELIXIR
K. Gurwitz, Prakash Singh Gaur, Louisa J. Bellis, L. Larcombe +26 more
2020PLoS Comput. Biol.12 citations Open access
Semantic Scholar
Staying on track – Keeping things running in a high‐end scientific imaging core facility
O. Renaud, Nathalie Aulner, Audrey Salles, Nadia Halidi +14 more
2024Journal of Microscopy11 citations Open access
Semantic Scholar
How tech‐savvy employees make the difference in core facilities
Saskia Lippens, D. Audenaert, Alexander Botzki, S. Derveaux +11 more
2022EMBO Reports10 citations Open access
Semantic Scholar
Structure‐Based Design Of Bacterial Hyaluronan Lyase Inhibitors
Alexander Botzki, Sunnhild Salmen, G. Bernhardt, A. Buschauer +1 more
20059 citations
Semantic Scholar
Structure-based design of hyaluronidase inhibitors
Alexander Botzki
20048 citations
Semantic Scholar
The Plant PTM Viewer, a central resource exploring plant protein modifications. From site-seeing to protein function
P. Willems, Alison Horne, S. Goormachtig, I. De Smet +3 more
2018bioRxiv7 citations Open access
Semantic Scholar
SNPeffect 5.0: large-scale structural phenotyping of protein coding variants extracted from next-generation sequencing data using AlphaFold models
Kobe Janssen, Ramon Duran-Romaña, G. Bottu, M. Guharoy +3 more
2023BMC Bioinformatics6 citations Open access
Semantic Scholar
Community-driven ELIXIR activities in single-cell omics
P. Czarnewski, A. Mahfouz, R. Calogero, P. Palagi +23 more
2022F1000Research5 citations Open access
Semantic Scholar
Unipept Visualizations: an interactive visualization library for biological data
Pieter Verschaffelt, James H. Collier, Alexander Botzki, L. Martens +2 more
2021Bioinform.5 citations Open access
Semantic Scholar
AutoSpill: A method for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data
C. Roca, O. Burton, T. Prezzemolo, C. Whyte +7 more
2020bioRxiv5 citations Open access
Semantic Scholar
Protein Homeostasis Database: protein quality control in E.coli
Reshmi Ramakrishnan, Bert Houben, Łukasz Kreft, Alexander Botzki +2 more
2019Bioinform.5 citations Open access
Semantic Scholar
Making Bioinformatics Training Events and Material More Discoverable Using TeSS, the ELIXIR Training Portal
F. Bacall, Aitor Apaolaza, Munazah Andrabi, Chris Child +3 more
2023Current Protocols4 citations Open access
Semantic Scholar
Counting more than beans
Farzaneh Ghazavi, Alexander Botzki, S. Derveaux, C. Durinx +3 more
2026EMBO Reports1 citations Open access
Semantic Scholar
Integrating multiple omics levels using the human protein complexome as a framework, a multi-omics study of inborn errors of metabolism
M. Guharoy, Isabelle Adant, Matthew J Bird, Andrea Jáñez Pedrayes +16 more
2023bioRxiv1 citations Open access
Semantic Scholar
Navigating the Global Protein-Protein Interaction Landscape Using iRefWeb.
A. Turinsky, S. Dupont, Alexander Botzki, S. Razick +3 more
2020Methods in molecular biology1 citations
Semantic Scholar
Scop3D: Online Visualization of Mutation Rates on Protein Structure.
Lukasz Kreft, Demet Turan, N. Hulstaert, Alexander Botzki +2 more
2018Journal of Proteome Research1 citations
Semantic Scholar
The complexome contextualizes proteomics data to fingerprint biological states and highlight perturbed functional modules in disease
M. Guharoy, Isabelle Adant, Matthew J Bird, Alexander Botzki +19 more
2026npj Systems Biology and Applications0 citations Open access
Semantic Scholar
Large-scale analysis of temporal gene expression variation in peripheral blood
Neha Mishra, Franziska Kimmig, D. Vandeputte, V. Talevi +64 more
2026Nature Communications0 citations Open access
Semantic Scholar
Strengthening bioinformatics education: e-learning initiatives across ELIXIR Nodes and Communities
Monique Zahn-Zabala, Minna Ahokas, B. Batut, Sebastian Beier +17 more
2025F1000Research0 citations Open access
Semantic Scholar
What we can learn from deep space communication for reproducible bioimaging and data analysis
Tatiana Woller, Christopher J Cawthorne, Romain Raymond Agnes Slootmaekers, Ingrid Barcena Roig +2 more
2023Molecular Systems Biology0 citations Open access
Semantic Scholar
Capacity building and training in datastewardship in ELIXIR
C. V. van Gelder, Christine Staiger, M. Jetten, S. Scholtens +3 more
20200 citations Open access
Semantic Scholar
ELIXIR Belgium: tools and services
K. De Ruyck, Frederik Coppens, L. Sterck, Alexander Botzki +1 more
20180 citations Open access
Semantic Scholar
Bioschemas: structured data for life science using schema.org
N. Beard, Martin Cook, A. Nenadic, R. Jiménez +21 more
20160 citations Open access
Semantic Scholar
Molecular modeling as a tool to identify putative interacting sites in the IL-1 receptor complex
J??rgen Radons, R. Altmann, Alexander Botzki, S. Dove +1 more
20020 citations
Semantic Scholar

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