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D. Gordenin · SciRah

Researcher profile · Semantic Scholar

D. Gordenin

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D. Gordenin — researcher profile on SciRah

h-index: 52
Works: 121
Citations: 21K

Most-cited papers

The repertoire of mutational signatures in human cancer
L. Alexandrov, Jaegil Kim, N. Haradhvala, Mi-Ni Huang +17 more
2018Nature3,208 citations Open access
Semantic Scholar
Comprehensive molecular characterization of muscle invasive bladder cancer
A. G. Robertson, Jaegil Kim, H. Al-Ahmadie, J. Bellmunt +170 more
2017Cell2,407 citations Open access
Semantic Scholar
Comprehensive Molecular Characterization of Urothelial Bladder Carcinoma
John N. Rehan Bradley M. Wenyi Roeland G. W. David Seth Weinstein Akbani Broom Wang Verhaak McConkey Lerne, John N. Rehan Bradley M. Wenyi Roeland G. W. David Weinstein Akbani Broom Wang Verhaak McConkey, J. Weinstein, R. Akbani +345 more
2014Nature2,115 citations Open access
Semantic Scholar
Integrated genomic and molecular characterization of cervical cancer
R. Burk, Zi-Gui Chen, C. Saller, Katherine Tarvin +297 more
2017Nature1,276 citations Open access
Semantic Scholar
Mutational heterogeneity in cancer and the search for new cancer genes
M. Lawrence, P. Stojanov, P. Polak, G. Kryukov +61 more
2013Nature1,179 citations Open access
Semantic Scholar
An APOBEC Cytidine Deaminase Mutagenesis Pattern is Widespread in Human Cancers
Steven A. Roberts, Michael S. Lawrence, L. Klimczak, Sara A. Grimm +11 more
2013Nature Genetics1,145 citations Open access
Semantic Scholar
The somatic genomic landscape of chromophobe renal cell carcinoma
C. Davis, C. Ricketts, Min Wang, Li-Xing Yang +42 more
2014Cancer Cell815 citations Open access
Semantic Scholar
Division of labor at the eukaryotic replication fork.
S. A. Nick McElhinny, D. Gordenin, Carrie M. W. Stith, P. Burgers +1 more
2008Molecules and Cells505 citations Open access
Semantic Scholar
Cadmium is a mutagen that acts by inhibiting mismatch repair
Y. H. Jin, Alan B. Clark, R. Slebos, Hanan Al-Refai +4 more
2003Nature Genetics479 citations Open access
Semantic Scholar
The Mre11 complex is required for repair of hairpin-capped double-strand breaks and prevention of chromosome rearrangements.
K. Lobachev, D. Gordenin, M. Resnick
2002Cell421 citations Open access
Semantic Scholar
Clustered Mutations in Yeast and in Human Cancers Can Arise from Damaged Long Single-Strand DNA Regions
Steven A. Roberts, J. Sterling, Cole Thompson, S. Harris +8 more
2012Molecules and Cells406 citations Open access
Semantic Scholar
An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers
Kin Chan, Steven A. Roberts, L. Klimczak, J. Sterling +8 more
2015Nature Genetics394 citations Open access
Semantic Scholar
Hypermutation in human cancer genomes: footprints and mechanisms
Steven A. Roberts, D. Gordenin
2014Nature Reviews. Cancer394 citations Open access
Semantic Scholar
Molecular evolution of early onset prostate cancer identifies molecular risk markers and clinical trajectories
C. Gerhauser, F. Favero, T. Risch, R. Simon +51 more
2018Cancer Cell284 citations Open access
Semantic Scholar
Genomic Subtypes of Non-Invasive Bladder Cancer with Distinct Metabolic Profile, Clinical Outcome and Female Gender Bias in KDM6A Mutation Frequency
C. Hurst, Olivia Alder, F. Platt, A. Droop +14 more
2017Cancer Cell262 citations Open access
Semantic Scholar
Genomic and evolutionary classification of lung cancer in never smokers
Tong-Wu Zhang, P. Joubert, N. Ansari-Pour, Wei Zhao +57 more
2021Nature Genetics212 citations Open access
Semantic Scholar
The 3′→5′ Exonucleases of DNA Polymerases δ and ɛ and the 5′→3′ Exonuclease Exo1 Have Major Roles in Postreplication Mutation Avoidance in Saccharomyces cerevisiae
H. Tran, D. Gordenin, M. Resnick
1999Molecular and Cellular Biology199 citations Open access
Semantic Scholar
Chromosomal site-specific double-strand breaks are efficiently targeted for repair by oligonucleotides in yeast
F. Storici, C. L. Durham, D. Gordenin, M. Resnick
2003Proceedings of the National Academy of Sciences of the United States of America188 citations Open access
Semantic Scholar
Okazaki Fragment Maturation in Yeast
Y. H. Jin, Rao Ayyagari, M. Resnick, D. Gordenin +1 more
2003Journal of Biological Chemistry176 citations Open access
Semantic Scholar
Break-Induced Replication is a Source of Mutation Clusters Underlying Kataegis
Cynthia J. Sakofsky, Steven A. Roberts, Ewa P. Malc, P. Mieczkowski +3 more
2014Cell Reports166 citations Open access
Semantic Scholar
The 3′→5′ exonuclease of DNA polymerase δ can substitute for the 5′ flap endonuclease Rad27/Fen1 in processing Okazaki fragments and preventing genome instability
Y. H. Jin, Robyn Obert, P. Burgers, T. Kunkel +2 more
2001Proceedings of the National Academy of Sciences of the United States of America159 citations Open access
Semantic Scholar
Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition
S. Lujan, A. Clausen, Alan B. Clark, Heather K. MacAlpine +7 more
2014Genome Research151 citations Open access
Semantic Scholar
Inverted Alu repeats unstable in yeast are excluded from the human genome
Kirill S. Lobachev, J. E. Stenger, O. G. Kozyreva, J. Jurka +2 more
2000EMBO Journal150 citations Open access
Semantic Scholar
Hypermutability of Damaged Single-Strand DNA Formed at Double-Strand Breaks and Uncapped Telomeres in Yeast Saccharomyces cerevisiae
Yong Yang, J. Sterling, F. Storici, M. Resnick +1 more
2008PLoS Genetics146 citations Open access
Semantic Scholar
APOBEC3-dependent kataegis and TREX1-driven chromothripsis during telomere crisis
J. Maciejowski, Aikaterini Chatzipli, Alexandra Dananberg, Kevan Chu +5 more
2020Nature Genetics141 citations Open access
Semantic Scholar
Okazaki Fragment Maturation in Yeast
Rao Ayyagari, Xavier V. Gomes, D. Gordenin, P. Burgers
2003Journal of Biological Chemistry137 citations Open access
Semantic Scholar
Clusters of Multiple Mutations: Incidence and Molecular Mechanisms
Kin Chan, D. Gordenin
2015Annual Review of Genetics135 citations Open access
Semantic Scholar
Flexibility of Eukaryotic Okazaki Fragment Maturation through Regulated Strand Displacement Synthesis*
Carrie M. W. Stith, J. Sterling, M. Resnick, D. Gordenin +1 more
2008Journal of Biological Chemistry129 citations Open access
Semantic Scholar
RNA-templated DNA repair
F. Storici, K. Bebenek, T. Kunkel, D. Gordenin +1 more
2007Nature117 citations Open access
Semantic Scholar
RNA-templated DNA repair
F. Storici, K. Bebenek, T. Kunkel, D. Gordenin +1 more
2007Nature116 citations Open access
Semantic Scholar
Somatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure
K. Akdemir, Victoria T. Le, Justin M. Kim, Sarah Killcoyne +23 more
2020Nature Genetics112 citations Open access
Semantic Scholar
Conservative Repair of a Chromosomal Double-Strand Break by Single-Strand DNA through Two Steps of Annealing
F. Storici, J. Snipe, Godwin K. Chan, D. Gordenin +1 more
2006Molecular and Cellular Biology110 citations Open access
Semantic Scholar
Base Damage within Single-Strand DNA Underlies In Vivo Hypermutability Induced by a Ubiquitous Environmental Agent
Kin Chan, J. Sterling, Steven A. Roberts, A. Bhagwat +2 more
2012PLoS Genetics102 citations Open access
Semantic Scholar
APOBEC-induced cancer mutations are uniquely enriched in early replicating, gene dense, and active chromatin regions
M. Kazanov, Steven A. Roberts, P. Polak, J. Stamatoyannopoulos +3 more
2015Cell Reports98 citations Open access
Semantic Scholar
Genome-wide model for the normal eukaryotic DNA replication fork
Andres A. Larrea, S. Lujan, S. A. Nick McElhinny, P. Mieczkowski +3 more
2010Proceedings of the National Academy of Sciences of the United States of America98 citations Open access
Semantic Scholar
The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts
Natalie Saini, Steven A. Roberts, L. Klimczak, Kin Chan +13 more
2016PLoS Genetics91 citations Open access
Semantic Scholar
Cohesin Is Limiting for the Suppression of DNA Damage–Induced Recombination between Homologous Chromosomes
S. Covo, J. Westmoreland, D. Gordenin, M. Resnick
2010PLoS Genetics91 citations Open access
Semantic Scholar
Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer
A. G. Robertson, Jaegil Kim, H. Al-Ahmadie, J. Bellmunt +38 more
2018Cell83 citations Open access
Semantic Scholar
The Multiple Biological Roles of the 3′→5′ Exonuclease of Saccharomyces cerevisiae DNA Polymerase δ Require Switching between the Polymerase and Exonuclease Domains
Y. H. Jin, Parie Garg, Carrie M. W. Stith, Hanan Al-Refai +6 more
2005Molecular and Cellular Biology79 citations Open access
Semantic Scholar
Infectious vaccine-derived rubella viruses emerge, persist, and evolve in cutaneous granulomas of children with primary immunodeficiencies
L. Perelygina, Min-Hsin Chen, S. Suppiah, Adebola B. Adebayo +15 more
2019PLoS Pathogens78 citations Open access
Semantic Scholar
The choice of nucleotide inserted opposite abasic sites formed within chromosomal DNA reveals the polymerase activities participating in translesion DNA synthesis
Kin Chan, M. Resnick, D. Gordenin
2013DNA Repair74 citations Open access
Semantic Scholar
Apn1 and Apn2 endonucleases prevent accumulation of repair-associated DNA breaks in budding yeast as revealed by direct chromosomal analysis
Wen-Jian Ma, M. Resnick, D. Gordenin
2008Nucleic Acids Research73 citations Open access
Semantic Scholar
Oxidative stress-induced mutagenesis in single-strand DNA occurs primarily at cytosines and is DNA polymerase zeta-dependent only for adenines and guanines
N. Degtyareva, L. Heyburn, J. Sterling, M. Resnick +2 more
2013Nucleic Acids Research67 citations Open access
Semantic Scholar
Alkylation Base Damage Is Converted into Repairable Double-Strand Breaks and Complex Intermediates in G2 Cells Lacking AP Endonuclease
Wen-Jian Ma, J. Westmoreland, D. Gordenin, M. Resnick
2011PLoS Genetics64 citations Open access
Semantic Scholar
A Single-Strand Specific Lesion Drives MMS-Induced Hypermutability at a Double-Strand Break in Yeast
Yong Yang, D. Gordenin, M. Resnick
2010DNA Repair59 citations Open access
Semantic Scholar
Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways
H. Klein, Giedrė Bačinskaja, Jun Che, Anais Cheblal +44 more
2019Microbial Cell53 citations Open access
Semantic Scholar
Clustered and genome-wide transient mutagenesis in human cancers: Hypermutation without permanent mutators or loss of fitness
Steven A. Roberts, D. Gordenin
2014Bioessays51 citations Open access
Semantic Scholar
UV-exposure, endogenous DNA damage, and DNA replication errors shape the spectra of genome changes in human skin
Natalie Saini, Camille K Giacobone, L. Klimczak, Brian N. Papas +8 more
2021PLoS Genetics50 citations Open access
Semantic Scholar
Hypermutation in single-stranded DNA
Natalie Saini, D. Gordenin
2020DNA Repair50 citations Open access
Semantic Scholar
The flexible loop of human FEN1 endonuclease is required for flap cleavage during DNA replication and repair
F. Storici, Ghislaine Henneke, E. Ferrari, D. Gordenin +2 more
2002EMBO Journal49 citations Open access
Semantic Scholar

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M. Resnick×23
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M. Resnick — researcher profile on SciRah
L. Klimczak×17
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L. Klimczak — researcher profile on SciRah
Steven A. Roberts×11
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Steven A. Roberts — researcher profile on SciRah
G. Getz×8
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P. Mieczkowski — researcher profile on SciRah

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T. Kunkel — researcher profile on SciRah

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Jaegil Kim — researcher profile on SciRah

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Natalie Saini×7

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Natalie Saini — researcher profile on SciRah

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F. Storici — researcher profile on SciRah