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O. White · SciRah

Researcher profile · Semantic Scholar

O. White

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O. White — researcher profile on SciRah

h-index: 83
Works: 128
Citations: 79K

Most-cited papers

Genome sequence of the human malaria parasite Plasmodium falciparum
M. Gardner, N. Hall, E. Fung, O. White +41 more
2002Nature4,481 citations Open access
Semantic Scholar
Environmental Genome Shotgun Sequencing of the Sargasso Sea
J. C. Venter, K. Remington, J. Heidelberg, A. Halpern +19 more
2004Science4,373 citations
Semantic Scholar
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
B. Haas, S. Salzberg, Wei Zhu, M. Perțea +5 more
2007Genome Biology3,577 citations Open access
Semantic Scholar
Improved microbial gene identification with GLIMMER.
A. Delcher, Douglas Harmon, S. Kasif, O. White +1 more
1999Nucleic Acids Research2,550 citations Open access
Semantic Scholar
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".
H. Tettelin, V. Masignani, M. Cieslewicz, C. Donati +42 more
2005Proceedings of the National Academy of Sciences of the United States of America2,504 citations Open access
Semantic Scholar
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies.
B. Haas, A. Delcher, Stephen M. Mount, J. Wortman +8 more
2003Nucleic Acids Research2,216 citations Open access
Semantic Scholar
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
J. Heidelberg, J. Eisen, W. Nelson, R. Clayton +28 more
2000Nature1,882 citations Open access
Semantic Scholar
The Genome of the African Trypanosome Trypanosoma brucei
M. Berriman, E. Ghedin, C. Hertz-Fowler, G. Blandin +98 more
2005Science1,730 citations Open access
Semantic Scholar
Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima
K. Nelson, R. Clayton, Steven R. Gill, M. Gwinn +25 more
1999Nature1,502 citations
Semantic Scholar
Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae
H. Tettelin, K. Nelson, I. Paulsen, J. Eisen +35 more
2001Science1,444 citations
Semantic Scholar
The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease
Najib M. A. el-Sayed, P. Myler, D. Bartholomeu, D. Nilsson +78 more
2005Science1,409 citations Open access
Semantic Scholar
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus
W. Nierman, A. Pain, Michael J. Anderson, J. Wortman +94 more
2005Nature1,406 citations Open access
Semantic Scholar
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.
K. E. Nelson, C. Weinel, I. Paulsen, R. Dodson +39 more
2002Environmental Microbiology1,396 citations Open access
Semantic Scholar
Genome sequence of Aedes aegypti, a major arbovirus vector
V. Nene, J. Wortman, D. Lawson, B. Haas +91 more
2007Science1,153 citations Open access
Semantic Scholar
Microbial gene identification using interpolated Markov models.
S. Salzberg, A. Delcher, S. Kasif, O. White
1998Nucleic Acids Research1,094 citations Open access
Semantic Scholar
The genome of the blood fluke Schistosoma mansoni
M. Berriman, B. Haas, P. LoVerde, R. Wilson +52 more
2009Nature1,037 citations Open access
Semantic Scholar
Alignment of whole genomes.
A. Delcher, S. Kasif, R. Fleischmann, J. Peterson +2 more
1999Nucleic Acids Research1,007 citations Open access
Semantic Scholar
The TIGRFAMs database of protein families
D. Haft, J. Selengut, O. White
2003Nucleic Acids Res.959 citations Open access
Semantic Scholar
Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.
O. White, J. Eisen, J. Heidelberg, E. Hickey +28 more
1999Science945 citations Open access
Semantic Scholar
Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis
J. Heidelberg, I. Paulsen, K. E. Nelson, E. Gaidos +39 more
2002Nature Biotechnology890 citations Open access
Semantic Scholar
A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi
S. Casjens, Nanette M Palmer, R. V. Van Vugt, Wai M. Huang +11 more
2000Molecular Microbiology877 citations
Semantic Scholar
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000
C. Buell, V. Joardar, M. Lindeberg, J. Selengut +40 more
2003Proceedings of the National Academy of Sciences of the United States of America857 citations Open access
Semantic Scholar
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria
Timothy D. Read, S. Peterson, N. Tourasse, L. Baillie +48 more
2003Nature845 citations Open access
Semantic Scholar
Comparative genomics of the neglected human malaria parasite Plasmodium vivax
J. Carlton, J. Adams, Joana C. Silva, Shelby L. Bidwell +36 more
2008Nature825 citations Open access
Semantic Scholar
Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis
J. Carlton, R. Hirt, Joana C. Silva, A. Delcher +61 more
2007Science814 citations Open access
Semantic Scholar
Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.
Timothy D. Read, R. Brunham, Cai-Xia Shen, S. Gill +21 more
2000Nucleic Acids Research811 citations Open access
Semantic Scholar
Comparative Genomics of Trypanosomatid Parasitic Protozoa
Najib M. A. el-Sayed, P. Myler, G. Blandin, M. Berriman +41 more
2005Science798 citations Open access
Semantic Scholar
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana
Xiao-Ying Lin, S. Kaul, S. Rounsley, T. Shea +33 more
1999Nature758 citations
Semantic Scholar
Whole-Genome Comparison of Mycobacterium tuberculosis Clinical and Laboratory Strains
R. Fleischmann, D. Alland, J. Eisen, L. Carpenter +22 more
2002Journal of Bacteriology738 citations Open access
Semantic Scholar
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
J. Carlton, Samuel V. Angiuoli, Bernard B. Suh, Taco W. A. Kooij +40 more
2002Nature728 citations Open access
Semantic Scholar
A Catalog of Reference Genomes from the Human Microbiome
K. Nelson, G. Weinstock, S. Highlander, K. Worley +79 more
2010Science720 citations Open access
Semantic Scholar
Genome of Geobacter sulfurreducens: Metal Reduction in Subsurface Environments
B. Methé, K. Nelson, J. Eisen, I. Paulsen +30 more
2003Science711 citations
Semantic Scholar
Draft Genome of the Filarial Nematode Parasite Brugia malayi
E. Ghedin, Shiliang Wang, D. Spiro, E. Caler +67 more
2007Science667 citations Open access
Semantic Scholar
The genome of M. acetivorans reveals extensive metabolic and physiological diversity.
J. Galagan, C. Nusbaum, Alice Roy, M. Endrizzi +51 more
2002Genome Research610 citations Open access
Semantic Scholar
Complete genome sequence of Caulobacter crescentus
W. Nierman, T. Feldblyum, M. Laub, I. Paulsen +33 more
2001Proceedings of the National Academy of Sciences of the United States of America543 citations Open access
Semantic Scholar
Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species.
K. Nelson, D. Fouts, E. Mongodin, J. Ravel +29 more
2004Nucleic Acids Research522 citations Open access
Semantic Scholar
Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus
N. Fedorova, N. Khaldi, V. Joardar, R. Maiti +35 more
2008PLoS Genetics518 citations Open access
Semantic Scholar
The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts
I. Paulsen, R. Seshadri, K. Nelson, J. Eisen +27 more
2002Proceedings of the National Academy of Sciences of the United States of America495 citations Open access
Semantic Scholar
TIGRFAMs: a protein family resource for the functional identification of proteins
D. Haft, B. Loftus, D. Richardson, Fan Yang +3 more
2001Nucleic Acids Res.494 citations Open access
Semantic Scholar
Comparative Genomics of Emerging Human Ehrlichiosis Agents
Julie C. Dunning Hotopp, Ming-Qun Lin, R. Madupu, Jonathan Crabtree +36 more
2006PLoS Genetics493 citations Open access
Semantic Scholar
Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics
Peter Arensburger, K. Megy, R. Waterhouse, J. Abrudan +72 more
2010Science470 citations Open access
Semantic Scholar
Genome Sequence of Babesia bovis and Comparative Analysis of Apicomplexan Hemoprotozoa
K. Brayton, Audrey O. T. Lau, David R. Herndon, L. Hannick +24 more
2007PLoS Pathogens403 citations Open access
Semantic Scholar
Structural flexibility in the Burkholderia mallei genome.
W. Nierman, D. DeShazer, H. Kim, H. Tettelin +29 more
2004Proceedings of the National Academy of Sciences of the United States of America394 citations Open access
Semantic Scholar
The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium
J. Eisen, K. Nelson, I. Paulsen, J. Heidelberg +31 more
2002Proceedings of the National Academy of Sciences of the United States of America381 citations Open access
Semantic Scholar
Genome Sequence of Theileria parva, a Bovine Pathogen That Transforms Lymphocytes
M. Gardner, R. Bishop, T. Shah, E. D. de Villiers +40 more
2005Science334 citations Open access
Semantic Scholar
The comprehensive microbial resource
Tanja Davidsen, Erin Beck, A. Ganapathy, R. Montgomery +7 more
2000Nucleic Acids Res.334 citations Open access
Semantic Scholar
Evidence for symmetric chromosomal inversions around the replication origin in bacteria
J. Eisen, J. Heidelberg, O. White, S. Salzberg
2000Genome Biology323 citations Open access
Semantic Scholar
Microbial Genes in the Human Genome: Lateral Transfer or Gene Loss?
S. Salzberg, O. White, J. Peterson, J. Eisen
2001Science317 citations
Semantic Scholar
Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae.
T. D. Read, G. Myers, R. Brunham, W. Nelson +17 more
2003Nucleic Acids Research307 citations Open access
Semantic Scholar
TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes
J. Selengut, D. Haft, Tanja Davidsen, Anurhada Ganapathy +4 more
2006Nucleic Acids Res.306 citations Open access
Semantic Scholar

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