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Aparna Pallavajjala · SciRah

Researcher profile · Semantic Scholar

Aparna Pallavajjala

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Aparna Pallavajjala — researcher profile on SciRah

h-index: 17
Works: 54
Citations: 741

Most-cited papers

Next-generation sequencing reveals recurrent somatic mutations in small cell neuroendocrine carcinoma of the uterine cervix
D. Xing, G. Zheng, J. Schoolmeester, Zaibo Li +7 more
2018American Journal of Surgical Pathology89 citations Open access
Semantic Scholar
Genetic Alterations Detected in Cell-Free DNA Are Associated With Enzalutamide and Abiraterone Resistance in Castration-Resistant Prostate Cancer
Samantha Torquato, Aparna Pallavajjala, Alexa Goldstein, P. V. Toro +20 more
2019JCO Precision Oncology59 citations Open access
Semantic Scholar
False positives in multiplex PCR-based next-generation sequencing have unique signatures.
C. McCall, Stacy L. Mosier, Michele Thiess, Marija Debeljak +7 more
2014Journal of Molecular Diagnostics56 citations Open access
Semantic Scholar
Characterization of functionally active gene fusions in human papillomavirus related oropharyngeal squamous cell carcinoma
Theresa Guo, Daria A. Gaykalova, M. Considine, S. Wheelan +8 more
2016International Journal of Cancer55 citations Open access
Semantic Scholar
CREBBP and STAT6 co-mutation and 16p13 and 1p36 loss define the t(14;18)-negative diffuse variant of follicular lymphoma
Re-Na R. Xian, Yi Xie, Lisa M Haley, R. Yonescu +7 more
2020Blood Cancer Journal47 citations Open access
Semantic Scholar
Lineage-Specific Alterations in Gynecologic Neoplasms with Choriocarcinomatous Differentiation: Implications for Origin and Therapeutics
D. Xing, G. Zheng, Aparna Pallavajjala, J. Schoolmeester +13 more
2019Clinical Cancer Research35 citations Open access
Semantic Scholar
TMB standardization by alignment to reference standards: Phase II of the Friends of Cancer Research TMB Harmonization Project.
Diana M. Merino, L. McShane, M. Butler, V. Funari +15 more
2019Journal of Clinical Oncology32 citations
Semantic Scholar
IDH1 and IDH2 Mutations in Colorectal Cancers.
Jialing Huang, L. Tseng, V. Parini, Parvez M. Lokhandwala +7 more
2021American Journal of Clinical Pathology29 citations
Semantic Scholar
Diagnostic Utility of Gene Fusion Panel to Detect Gene Fusions in Fresh and Formalin-Fixed, Paraffin-Embedded Cancer Specimens.
Lisa M Haley, Vamsi Parimi, Li-Qun Jiang, Aparna Pallavajjala +7 more
2021Journal of Molecular Diagnostics28 citations Open access
Semantic Scholar
HER2 amplification by next-generation sequencing to identify HER2-positive invasive breast cancer with negative HER2 immunohistochemistry
Laura A Morsberger, Aparna Pallavajjala, Patty Long, Melanie Hardy +4 more
2022Cancer Cell International26 citations Open access
Semantic Scholar
Validation of long mononucleotide repeat markers for detection of microsatellite instability.
John H. Lin, Su-Ping Chen, Aparna Pallavajjala, Liana B. Guedes +3 more
2021Journal of Molecular Diagnostics22 citations Open access
Semantic Scholar
Haplotype counting by next-generation sequencing for ultrasensitive human DNA detection.
Marija Debeljak, Donald Freed, J. Welch, Lisa M Haley +9 more
2014Journal of Molecular Diagnostics22 citations Open access
Semantic Scholar
Optimizing Insertion and Deletion Detection using Next Generation Sequencing in the Clinical Laboratory.
K. Craven, Catherine G. Fischer, Li-Qun Jiang, Aparna Pallavajjala +2 more
2022Journal of Molecular Diagnostics20 citations Open access
Semantic Scholar
Clinical Utility of Targeted Next-Generation Sequencing Assay to Detect Copy Number Variants Associated with Myelodysplastic Syndrome in Myeloid Malignancies.
Li-Qun Jiang, Aparna Pallavajjala, Jialing Huang, Lisa M Haley +17 more
2021Journal of Molecular Diagnostics20 citations Open access
Semantic Scholar
Clonal hematopoiesis in men living with HIV and association with subclinical atherosclerosis
Shiyu Wang, Sergiu Pasca, W. Post, Susan J. Langan +9 more
2022AIDS (London)19 citations Open access
Semantic Scholar
Detection fidelity of AR mutations in plasma derived cell-free DNA
Alexa Goldstein, P. V. Toro, Justin Lee, J. Silberstein +19 more
2017OncoTarget19 citations Open access
Semantic Scholar
Diagnostic and Prognostic/Therapeutic Significance of Comprehensive Analysis of Bone and Soft Tissue Tumors Using Optical Genome Mapping and Next-generation Sequencing.
J. Ghabrial, Victoria Stinnett, Efrain Ribeiro, Melanie Klausner +13 more
2024Modern Pathology17 citations
Semantic Scholar
Cell-free DNA measurable residual disease as a predictor of postallogeneic hematopoietic cell transplant outcomes
Sergiu Pasca, M. Guo, Shiyu Wang, Kristin Stokvis +9 more
2023Blood Advances15 citations Open access
Semantic Scholar
GRANULAR CELL ASTROCYTOMA: AN AGGRESSIVE IDH-WILDTYPE DIFFUSE GLIOMA WITH MOLECULAR GENETIC FEATURES OF PRIMARY GLIOBLASTOMA
M. A. Vizcaino, Doreen N. Palsgrove, Ming Yuan, C. Giannini +4 more
2018Brain Pathology14 citations Open access
Semantic Scholar
Utility of Targeted Next-Generation Sequencing Assay to Detect 1p/19q Co-Deletion in Formalin-fixed Paraffin-embedded Glioma Specimens.
Aparna Pallavajjala, Lisa M Haley, Victoria Stinnett, Emily Adams +9 more
2022Human Pathology13 citations
Semantic Scholar
High-Grade, Non-Sarcomatoid Chromophobe Renal Cell Carcinoma: A Series of 22 Cases with Novel Molecular Features on A Subset.
E. Baraban, Roy Elias, Ming-Tseh Lin, Y. Ged +7 more
2024Modern Pathology11 citations
Semantic Scholar
Artificial intelligence-assisted serial analysis of clinical cancer genomics data identifies changing treatment recommendations and therapeutic targets
Catherine G. Fischer, Aparna Pallavajjala, Li-Qun Jiang, V. Anagnostou +7 more
2022Clinical Cancer Research11 citations Open access
Semantic Scholar
Clinicopathologic and Molecular Analysis of Malignant Neoplasms With Yolk Sac Tumor Differentiation in Women 40 Years of Age and Older.
Tricia A. Numan, B. Ronnett, Lisa Haley, Aparna Pallavajjala +9 more
2025American Journal of Surgical Pathology10 citations
Semantic Scholar
Rapid Detection of PML::RARA Fusions in Acute Promyelocytic Leukemia: CRISPR/Cas9 Nanopore Sequencing with Adaptive Sampling
William Middlezong, Victoria Stinnett, Michael Phan, Brian Phan +10 more
2024Biomolecules9 citations Open access
Semantic Scholar
Clinicopathologic Features and Genetic Alterations of a Primary Osteosarcoma of the Uterine Corpus.
G. Zheng, Abby M. Richmond, Chengbao Liu, A. Berrebi +6 more
2019International Journal of Gynecological Pathology9 citations
Semantic Scholar
TransFlip Mutations Produce Deletions in Pancreatic Cancer
Alexis L. Norris, H. Kamiyama, Alvin P. Makohon-Moore, Aparna Pallavajjala +9 more
2015Genes, Chromosomes and Cancer9 citations Open access
Semantic Scholar
Genomic characterization of chromosome translocations in patients with T/myeloid mixed-phenotype acute leukemia
Aparna Pallavajjala, Daehwan Kim, Tongbin Li, G. Ghiaur +4 more
2017Leukemia and Lymphoma8 citations Open access
Semantic Scholar
Comparative analysis reveals recurrent molecular alterations in low-risk human papillomavirus 6 and human papillomavirus 11-associated squamous cell carcinoma of the uterine cervix and vulva
Ying Sun, Colton Smith, Jason Murray, Jing Zhu +8 more
2025Modern Pathology6 citations
Semantic Scholar
Germline ERBB2/HER2 Coding Variants Are Associated with Increased Risk of Myeloproliferative Neoplasms
Evan M. Braunstein, Hang Chen, Felicia Juarez, Fanghan Yang +11 more
2021Cancers6 citations Open access
Semantic Scholar
NUP98-PHF23 fusion is recurrent in acute myeloid leukemia and shares gene expression signature of leukemic stem cells.
H. Ho, A. Skaist, Aparna Pallavajjala, R. Yonescu +3 more
2016Leukemia research : a Forum for Studies on Leukemia and Normal Hemopoiesis6 citations
Semantic Scholar
Brain Metastasis in Pediatric Patients with Osteosarcoma
Jacob Murphy, R. Sundby, Erin E Resch, Ruyan Rahnama +15 more
2024Current Oncology3 citations
Semantic Scholar
1q jumping translocation as a biomarker in myeloid malignancy: frequently mutated genes associated with bad prognosis and low survival
E. Halper-Stromberg, Victoria Stinnett, Laura A Morsberger, Aparna Pallavajjala +8 more
2024Experimental Hematology & Oncology3 citations Open access
Semantic Scholar
Neurofibroma-like Desmoplastic Melanoma
E. Baraban, Alejandro A. Gru, Ruifeng Guo, Roy Elias +3 more
2024American Journal of Surgical Pathology3 citations
Semantic Scholar
Cell-Free DNA (cfDNA)-Based Measurable Residual Disease (MRD) Detection As a Predictor of Relapse Post-Allogeneic Blood or Marrow Transplant (alloBMT) in Patients with Myeloid Malignancies
Sergiu-Vlad Paşca, M. Guo, Shiyu Wang, Kristin Stokvis +10 more
2022Blood3 citations Open access
Semantic Scholar
Biotinylated amplicon sequencing: A method for preserving DNA samples of limited quantity
Karen Cravero, A. Medford, Aparna Pallavajjala, J. Canzoniero +9 more
2018Practical Laboratory Medicine3 citations Open access
Semantic Scholar
Loss of Methylthioadenosine Phosphorylase (MTAP) Expression: A Potentially Useful Tool for Distinguishing Sarcomatoid Urothelial Carcinoma from Inflammatory Myofibroblastic Tumor.
Hui-Li Li, P. Argani, John M. Gross, Jing Zhu +6 more
2026Modern Pathology1 citations
Semantic Scholar
Long-Term Storage of Formalin-Fixed Paraffin-Embedded Tissues Negatively Impacts Next-Generation Sequencing: Successful Restoration with a DNA Repair Enzyme.
Annie A. Wu, Lisa Haley, Aparna Pallavajjala, Prisca Mbonu +9 more
2026Clinical Chemistry1 citations
Semantic Scholar
Highly sensitive and specific markers for detection of mismatch repair deficiency by next-generation sequencing.
Ming-Tseh Lin, Eric Christenson, Aparna Pallavajjala, J. Eshleman
2025American Journal of Clinical Pathology1 citations
Semantic Scholar
Identification of a novel KMT2A–SEPT14 fusion in acute myeloid leukemia
Doreen N. Nguyen, Lisa M Haley, Aparna Pallavajjala, I. Gojo +1 more
2018Leukemia and Lymphoma1 citations
Semantic Scholar
Optic nerve sheath meningiomas harbor distinct genetic variants.
Samuel W. Hulbert, Gianluca Lopez, Liam Chen, Suping Chen +9 more
2026American Journal of Clinical Pathology0 citations Open access
Semantic Scholar
P123: Rapid detection of PML::RARA fusions in acute promyelocytic leukemia using CRISPR/Cas9-mediated nanopore sequencing with adaptive sampling
Ying S. Zou, William Middlezong, Victoria Stinnett, Michael Phan +10 more
2025Genetics in Medicine Open0 citations Open access
Semantic Scholar
1836 Next Generation Sequencing Variant Call Artifacts in Archival FFPE Tissues and Successful Restoration with a DNA Repair Enzyme
Annie Wu, L. Haley, V. Parimi, Aparna Pallavajjala +7 more
2025Laboratory Investigation0 citations
Semantic Scholar
RECQL4 alterations in gliomas and nerve sheath tumors: Expression patterns and therapeutic implications
S. Belakhoua, Gianluca Lopez, Swati Dubey, Simran Rai +9 more
2025Journal of Neuropathology and Experimental Neurology0 citations Open access
Semantic Scholar
DSAI-01 TUMOR EVOLUTION OF BRAIN-SPECIFIC TROPISM IN METASTATIC RENAL CELL CARCINOMA
Roy Elias, D. Kamson, Ardit Feinaj, Aparna Pallavajjala +11 more
2024Neuro-Oncology Advances0 citations Open access
Semantic Scholar
Tumor evolution of brain-specific tropism in metastatic renal cell carcinoma.
Roy Elias, Ardit Feinaj, Aparna Pallavajjala, A. Yerrapragada +11 more
2024Journal of Clinical Oncology0 citations
Semantic Scholar
Abstract LB_B02: Novel PAMs from somatic mutations produce numerous pancreatic cancer-specific CRISPR-Cas9 targets for selective cell elimination: A novel gene therapy approach for cancer
S. Teh, Kirsten Bowland, Alexis Bennett, E. Halper-Stromberg +9 more
2023Molecular Cancer Therapeutics0 citations
Semantic Scholar
Somatic protospacer adjacent motifs are numerous and selectively targetable in 1 cancers 2
S. Teh, Kirsten Bowland, Alexis Bennett, EitanHalper +14 more
20230 citations
Semantic Scholar
Abstract 3954: Evaluation of long mononucleotide repeat markers for detection of microsatellite instability
Su-Ping Chen, John H. Lin, Aparna Pallavajjala, T. Lotan +2 more
2023Cancer Research0 citations
Semantic Scholar
Abstract 237: Coincidence of InDels with missense mutations: 0, 1 or 2 artifacts
K. Craven, Catherine G. Fischer, Li-Qun Jiang, Aparna Pallavajjala +2 more
2023Cancer Research0 citations
Semantic Scholar
17. Multi-consortia initiative to standardize the representation and curation of oncogenic fusions
A. Wagner, Ioannis Vlachos, D. Sonkin, P. Terraf +38 more
2022Cancer Genetics0 citations
Semantic Scholar

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