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Young-Mo Kim · SciRah

Researcher profile · Semantic Scholar

Young-Mo Kim

Pacific Northwest National Laboratory

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Young-Mo Kim — researcher profile on SciRah

ORCID iD 0000-0002-8972-7593Homepage

h-index: 47
Works: 110
Citations: 7,338

Most-cited papers

Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice
G. Sharon, Nikki Jamie Cruz, Dae-Wook Kang, Michael Jeffrey Gandal +20 more
2019Cell1,054 citations Open access
Semantic Scholar
Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria
Ling Xu, D. Naylor, Zhaobin Dong, T. Simmons +19 more
2018Proceedings of the National Academy of Sciences of the United States of America583 citations Open access
Semantic Scholar
Decolorization of reactive dyes by a thermostable laccase produced by Ganoderma lucidum in solid state culture
K. Murugesan, I. Nam, Young-Mo Kim, Yoon-Seok Chang
2007300 citations
Semantic Scholar
MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses
E. Nakayasu, C. Nicora, A. Sims, K. Burnum-Johnson +11 more
2016mSystems216 citations Open access
Semantic Scholar
Polystyrene nano- and microplastic accumulation at Arabidopsis and wheat root cap cells, but no evidence for uptake into roots
Stephen E Taylor, C. Pearce, Karen A. Sanguinet, De-Hong Hu +4 more
2020Environmental Science: Nano206 citations
Semantic Scholar
Effect of metal ions on reactive dye decolorization by laccase from Ganoderma lucidum.
K. Murugesan, Young-Mo Kim, Jong-Rok Jeon, Yoon-Seok Chang
2009Journal of Hazardous Materials184 citations
Semantic Scholar
Model-driven multi-omic data analysis elucidates metabolic immunomodulators of macrophage activation
A. Bordbar, Monica L. Mo, E. Nakayasu, Alexandra C Schrimpe-Rutledge +9 more
2012Molecular Systems Biology161 citations Open access
Semantic Scholar
Triclosan susceptibility and co-metabolism--a comparison for three aerobic pollutant-degrading bacteria.
Young-Mo Kim, K. Murugesan, S. Schmidt, Varima Bokare +3 more
2011Bioresource Technology136 citations
Semantic Scholar
Enhanced transformation of triclosan by laccase in the presence of redox mediators.
K. Murugesan, Yoon-Young Chang, Young-Mo Kim, Jong-Rok Jeon +2 more
2010Water Research134 citations
Semantic Scholar
Biodegradation of 1,4-dioxane and transformation of related cyclic compounds by a newly isolated Mycobacterium sp. PH-06
Young-Mo Kim, Jong-Rok Jeon, K. Murugesan, Eun-Ju Kim +1 more
2009Biodegradation126 citations
Semantic Scholar
Phototrophic biofilm assembly in microbial-mat-derived unicyanobacterial consortia: model systems for the study of autotroph-heterotroph interactions
J. Cole, J. Hutchison, R. Renslow, Young-Mo Kim +7 more
2014Frontiers in Microbiology122 citations Open access
Semantic Scholar
Enhanced transformation of malachite green by laccase of Ganoderma lucidum in the presence of natural phenolic compounds
K. Murugesan, I. Yang, Young-Mo Kim, Jong-Rok Jeon +1 more
2009Applied Microbiology and Biotechnology116 citations
Semantic Scholar
Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering
Chen Ling, George L Peabody, Davinia Salvachúa, Young-Mo Kim +13 more
2022Nature Communications114 citations Open access
Semantic Scholar
The Specific Carbohydrate Diet and Diet Modification as Induction Therapy for Pediatric Crohn’s Disease: A Randomized Diet Controlled Trial
D. Suskind, Dale Lee, Young-Mo Kim, G. Wahbeh +8 more
2020Nutrients113 citations Open access
Semantic Scholar
Influence of early life exposure, host genetics and diet on the mouse gut microbiome and metabolome
A. Snijders, Sasha A. Langley, Young-Mo Kim, C. Brislawn +13 more
2016Nature Microbiology111 citations
Semantic Scholar
Multi-Platform ‘Omics Analysis of Human Ebola Virus Disease Pathogenesis
A. Eisfeld, Peter J. Halfmann, J. Wendler, J. Kyle +26 more
2017Cell Host and Microbe107 citations Open access
Semantic Scholar
Gut anatomical properties and microbial functional assembly promote lignocellulose deconstruction and colony subsistence of a wood-feeding beetle
J. Ceja-Navarro, U. Karaoz, M. Bill, Z. Hao +14 more
2019Nature Microbiology104 citations Open access
Semantic Scholar
Use of grape seed and its natural polyphenol extracts as a natural organic coagulant for removal of cationic dyes.
Jong-Rok Jeon, Eun-Ju Kim, Young-Mo Kim, K. Murugesan +2 more
2009Chemosphere100 citations
Semantic Scholar
Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms
Young-Mo Kim, Shane Nowack, M. T. Olsen, E. Becraft +8 more
2015Frontiers in Microbiology98 citations Open access
Semantic Scholar
Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica
Kyle R. Pomraning, Young-Mo Kim, C. Nicora, Rosalie K. Chu +5 more
2016BMC Genomics95 citations Open access
Semantic Scholar
Biallelic Mutations in ATP5F1D, which Encodes a Subunit of ATP Synthase, Cause a Metabolic Disorder
M. Oláhová, W. Yoon, K. Thompson, S. Jangam +209 more
2018American Journal of Human Genetics91 citations Open access
Semantic Scholar
Degradation of triclosan by an integrated nano-bio redox process.
Varima Bokare, K. Murugesan, Young-Mo Kim, Jong-Rok Jeon +2 more
2010Bioresource Technology89 citations
Semantic Scholar
Genetic and metabolic links between the murine microbiome and memory
Jian-Hua Mao, Young-Mo Kim, Yan-Xia Zhou, De-Hong Hu +14 more
2020Microbiome88 citations Open access
Semantic Scholar
Elucidation of roles for vitamin B12 in regulation of folate, ubiquinone, and methionine metabolism
M. Romine, D. Rodionov, Yukari Maezato, Lindsey N. Anderson +9 more
2017Proceedings of the National Academy of Sciences of the United States of America88 citations Open access
Semantic Scholar
Temporospatial shifts in the human gut microbiome and metabolome after gastric bypass surgery
Z. Ilhan, J. DiBaise, Sydney E. Dautel, N. Isern +10 more
2020npj Biofilms and Microbiomes87 citations Open access
Semantic Scholar
Laccase‐catalysed polymeric dye synthesis from plant‐derived phenols for potential application in hair dyeing: Enzymatic colourations driven by homo‐ or hetero‐polymer synthesis
Jong-Rok Jeon, Eun-Ju Kim, K. Murugesan, Hyokeun Park +5 more
2009Microbial Biotechnology86 citations Open access
Semantic Scholar
Degradation of polybrominated diphenyl ethers by a sequential treatment with nanoscale zero valent iron and aerobic biodegradation
Young-Mo Kim, K. Murugesan, Yoon-Young Chang, Eun-ju Kim +1 more
201284 citations
Semantic Scholar
The state of rhizospheric science in the era of multi-omics: A practical guide to omics technologies
R. White, A. Rivas-Ubach, Mark Borkum, M. Köberl +8 more
2017Rhizosphere83 citations Open access
Semantic Scholar
A Multi-Omic View of Host-Pathogen-Commensal Interplay in Salmonella-Mediated Intestinal Infection
B. L. Deatherage Kaiser, Jie Li, J. Sanford, Young-Mo Kim +11 more
2013PLoS ONE81 citations Open access
Semantic Scholar
Synergistic effect of laccase mediators on pentachlorophenol removal by Ganoderma lucidum laccase
Jong-Rok Jeon, K. Murugesan, Young-Mo Kim, Eun-Ju Kim +1 more
2008Applied Microbiology and Biotechnology78 citations
Semantic Scholar
Integrated omics analysis of pathogenic host responses during pandemic H1N1 influenza virus infection: the crucial role of lipid metabolism
Jennifer Tisoncik-Go, David J. Gasper, J. Kyle, A. Eisfeld +21 more
2016Cell Host and Microbe77 citations Open access
Semantic Scholar
Synthetic microbial communities of heterotrophs and phototrophs facilitate sustainable growth
Cristal Zúñiga, Ting-Ting Li, M. Guarnieri, J. Jenkins +5 more
2020Nature Communications76 citations Open access
Semantic Scholar
Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations
Taniya Roy Chowdhury, Joon-Yong Lee, E. Bottos, C. Brislawn +13 more
2019mSystems76 citations Open access
Semantic Scholar
SPE-IMS-MS: An automated platform for sub-sixty second surveillance of endogenous metabolites and xenobiotics in biofluids
Xing Zhang, M. Romm, Xue-Yun Zheng, Erika M. Zink +23 more
2016Clinical Mass Spectrometry69 citations Open access
Semantic Scholar
Lipidomics reveals dramatic lipid compositional changes in the maturing postnatal lung
Sydney E. Dautel, J. Kyle, G. Clair, Ryan L. Sontag +13 more
2017Scientific Reports68 citations Open access
Semantic Scholar
Silymarin Suppresses Cellular Inflammation By Inducing Reparative Stress Signaling
Erica S. Lovelace, J. Wagoner, James W. MacDonald, T. Bammler +12 more
2015Journal of Natural Products65 citations Open access
Semantic Scholar
Comprehensive Metabolomic, Lipidomic and Microscopic Profiling of Yarrowia lipolytica during Lipid Accumulation Identifies Targets for Increased Lipogenesis
Kyle R. Pomraning, Siwei Wei, Sue A. Karagiosis, Young-Mo Kim +6 more
2015PLoS ONE57 citations Open access
Semantic Scholar
Salmonella Modulates Metabolism during Growth under Conditions that Induce Expression of Virulence Genes
Young-Mo Kim, B. Schmidt, Afshan S. Kidwai, Marcus B. Jones +12 more
2013Molecular Biosystems56 citations Open access
Semantic Scholar
Multi-Omics Driven Metabolic Network Reconstruction and Analysis of Lignocellulosic Carbon Utilization in Rhodosporidium toruloides
Joonhoon Kim, S. Coradetti, Young-Mo Kim, Yu-Qian Gao +10 more
2021Frontiers in Bioengineering and Biotechnology54 citations Open access
Semantic Scholar
MPLEx: A method for simultaneous pathogen inactivation and extraction of samples for multi-omics profiling
K. Burnum-Johnson, J. Kyle, A. Eisfeld, Cameron P. Casey +24 more
2017In Analysis47 citations Open access
Semantic Scholar
Bioremediation of PCDD/Fs-contaminated municipal solid waste incinerator fly ash by a potent microbial biocatalyst.
I. Nam, Young-Mo Kim, K. Murugesan, Jong-Rok Jeon +2 more
2008Journal of Hazardous Materials47 citations
Semantic Scholar
Metabolomic response of human skin tissue to low dose ionizing radiation.
Ze-Ping Hu, Young-Mo Kim, M. Sowa, R. J. Robinson +4 more
2012Molecular Biosystems42 citations
Semantic Scholar
Light-Stress Influences the Composition of the Murine Gut Microbiome, Memory Function, and Plasma Metabolome
Young-Mo Kim, A. Snijders, C. Brislawn, K. Stratton +5 more
2019Frontiers in Molecular Biosciences40 citations Open access
Semantic Scholar
The MPLEx Protocol for Multi-omic Analyses of Soil Samples
C. Nicora, K. Burnum-Johnson, E. Nakayasu, Cameron P. Casey +8 more
2018Journal of Visualized Experiments40 citations Open access
Semantic Scholar
Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica
E. Kerkhoven, Young-Mo Kim, Siwei Wei, C. Nicora +7 more
2017mBio39 citations Open access
Semantic Scholar
Dichomitus squalens partially tailors its molecular responses to the composition of solid wood
P. Daly, S. C. López, M. Peng, Christopher S. Lancefield +17 more
2018Environmental Microbiology38 citations Open access
Semantic Scholar
Cryptococcus neoformans-Infected Macrophages Release Proinflammatory Extracellular Vesicles: Insight into Their Components by Multi-omics
Lei Zhang, Ke-Ming Zhang, Hang Li, C. Coelho +8 more
2021mBio35 citations Open access
Semantic Scholar
A mutli-omic systems approach to elucidating Yersinia virulence mechanisms
C. Ansong, Alexandra C Schrimpe-Rutledge, H. Mitchell, Sadhana Chauhan +13 more
2012Molecular Biosystems33 citations Open access
Semantic Scholar
Tuning a high performing multiplexed-CRISPRi Pseudomonas putida strain to further enhance indigoidine production
Jeffrey J. Czajka, Deepanwita Banerjee, Thomas Eng, Javier Menasalvas +7 more
2022Metabolic Engineering Communications32 citations Open access
Semantic Scholar
Comparing Identified and Statistically Significant Lipids and Polar Metabolites in 15-Year Old Serum and Dried Blood Spot Samples for Longitudinal Studies
J. Kyle, Cameron P. Casey, K. Stratton, Erika M. Zink +14 more
2017Rapid Communications in Mass Spectrometry32 citations Open access
Semantic Scholar

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