Skip to content

Home Search Authors Pakistan News Saved

SciRah

SciRah does not host or store research papers. Results come live from free, official scholarly APIs, and every paper links back to its original source.

Data sources

OpenAlex
Semantic Scholar
Crossref
CORE
arXiv
PubMed

Privacy policy Terms of service

Yu-Qian Gao · SciRah

Researcher profile · Semantic Scholar

Yu-Qian Gao

Share profile

Yu-Qian Gao — researcher profile on SciRah

h-index: 26
Works: 92
Citations: 2,414

Most-cited papers

Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation
E. Nakayasu, M. Gritsenko, P. Piehowski, Yu-Qian Gao +12 more
2021Nature Protocols222 citations Open access
Semantic Scholar
Automated mass spectrometry imaging of over 2000 proteins from tissue sections at 100-μm spatial resolution
P. Piehowski, Ying Zhu, L. Bramer, K. Stratton +10 more
2020Nature Communications215 citations Open access
Semantic Scholar
Recommendations for the generation, quantification, storage and handling of peptides used for mass spectrometry-based assays
A. Hoofnagle, Jeffrey R. Whiteaker, Steven A. Carr, Eric Kuhn +51 more
2016Clinical Chemistry205 citations Open access
Semantic Scholar
Free 25-Hydroxyvitamin D: Impact of Vitamin D Binding Protein Assays on Racial-Genotypic Associations
C. Nielson, Kerry S. Jones, Re-Ne Chun, Jon M. Jacobs +18 more
2016Journal of Clinical Endocrinology and Metabolism157 citations Open access
Semantic Scholar
Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway
Tu-Jin Shi, M. Niepel, J. Mcdermott, Yu-Qian Gao +9 more
2016Science Signaling128 citations Open access
Semantic Scholar
Role of Assay Type in Determining Free 25-Hydroxyvitamin D Levels in Diverse Populations
C. Nielson, Kerry S. Jones, R. Bouillon, Re-Ne Chun +17 more
2016New England Journal of Medicine89 citations Open access
Semantic Scholar
Mining the human urine proteome for monitoring renal transplant injury
T. Sigdel, Yu-Qian Gao, Jintang He, An-You Wang +9 more
2016Kidney International84 citations Open access
Semantic Scholar
Targeted quantification of low ng/mL level proteins in human serum without immunoaffinity depletion
Tu-Jin Shi, Xuefei Sun, Yu-Qian Gao, T. Fillmore +12 more
2013Journal of Proteome Research73 citations Open access
Semantic Scholar
Moisture modulates soil reservoirs of active DNA and RNA viruses
Ruonan Wu, M. Davison, Yu-Qian Gao, C. Nicora +4 more
2021Communications Biology72 citations Open access
Semantic Scholar
Multi-scale signaling and tumor evolution in high-grade gliomas
Jingxian Liu, Song Cao, K. Imbach, M. Gritsenko +70 more
2024Cancer Cell66 citations Open access
Semantic Scholar
Further engineering of R. toruloides for the production of terpenes from lignocellulosic biomass
J. Kirby, Gina M. Geiselman, Junko Yaegashi, Joonhoon Kim +18 more
2020Biotechnology for Biofuels66 citations Open access
Semantic Scholar
A highly sensitive targeted mass spectrometric assay for quantification of AGR2 protein in human urine and serum
Tu-Jin Shi, Yu-Qian Gao, Sue‐Ing Quek, T. Fillmore +12 more
2013Journal of Proteome Research62 citations Open access
Semantic Scholar
Multi-Omics Driven Metabolic Network Reconstruction and Analysis of Lignocellulosic Carbon Utilization in Rhodosporidium toruloides
Joonhoon Kim, S. Coradetti, Young-Mo Kim, Yu-Qian Gao +10 more
2021Frontiers in Bioengineering and Biotechnology54 citations Open access
Semantic Scholar
Production of ent-kaurene from lignocellulosic hydrolysate in Rhodosporidium toruloides
Gina M. Geiselman, Xun Zhuang, J. Kirby, M. Tran-Gyamfi +12 more
2020Microbial Cell Factories49 citations Open access
Semantic Scholar
The long noncoding RNA Paupar modulates PAX6 regulatory activities to promote alpha cell development and function
Ruth A. Singer, L. Arnes, Yi Cui, Ji-Guang Wang +7 more
2019Cell Metabolism49 citations Open access
Semantic Scholar
Capillary Electrophoresis–Nanoelectrospray Ionization–Selected Reaction Monitoring Mass Spectrometry via a True Sheathless Metal-Coated Emitter Interface for Robust and High-Sensitivity Sample Quantification
Xue-Jiang Guo, T. Fillmore, Yu-Qian Gao, Keqi Tang
2016Analytical Chemistry45 citations Open access
Semantic Scholar
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements
Aivett Bilbao, N. Munoz, Joonhoon Kim, D. Orton +24 more
2023Nature Communications43 citations Open access
Semantic Scholar
Long-gradient separations coupled with selected reaction monitoring for highly sensitive, large scale targeted protein quantification in a single analysis
Tu-Jin Shi, T. Fillmore, Yu-Qian Gao, Rui Zhao +14 more
2013Analytical Chemistry42 citations Open access
Semantic Scholar
Plasma protein biomarkers predict the development of persistent autoantibodies and type 1 diabetes 6 months prior to the onset of autoimmunity
E. Nakayasu, L. Bramer, C. Ansong, A. Schepmoes +21 more
2023Cell Reports Medicine37 citations Open access
Semantic Scholar
Targeted proteomic assays for quantitation of proteins identified by proteogenomic analysis of ovarian cancer
Ehwang Song, Yu-Qian Gao, Chaochao Wu, Tu-Jin Shi +8 more
2017Scientific Data36 citations Open access
Semantic Scholar
Engineering Rhodosporidium toruloides for production of 3-Hydroxypropionic acid from lignocellulosic Hydrolysate.
Di Liu, H. Hwang, P. Otoupal, Gina M. Geiselman +17 more
2023Metabolic Engineering32 citations Open access
Semantic Scholar
Sensitive Targeted Quantification of ERK Phosphorylation Dynamics and Stoichiometry in Human Cells without Affinity Enrichment
Tu-Jin Shi, Yu-Qian Gao, Matthew J. Gaffrey, C. Nicora +13 more
2014Analytical Chemistry30 citations Open access
Semantic Scholar
High‐throughput serum proteomics for the identification of protein biomarkers of mortality in older men
E. Orwoll, J. Wiedrick, Jon M. Jacobs, E. Baker +9 more
2018Aging Cell29 citations Open access
Semantic Scholar
Functional Enzyme-Based Approach for Linking Microbial Community Functions with Biogeochemical Process Kinetics.
Min-Jing Li, W. Qian, Yu-Qian Gao, Liang Shi +1 more
2017Environmental Science and Technology29 citations
Semantic Scholar
Expediting SRM assay development for large-scale targeted proteomics experiments
Chaochao Wu, Tu-Jin Shi, Joseph N. Brown, Jintang He +9 more
2014Journal of Proteome Research29 citations Open access
Semantic Scholar
Evaluation of chromosomal insertion loci in the Pseudomonas putida KT2440 genome for predictable biosystems design
Julie E. Chaves, R. Wilton, Yu-Qian Gao, N. Munoz +10 more
2020Metabolic Engineering Communications28 citations Open access
Semantic Scholar
Mapping microhabitats of lignocellulose decomposition by a microbial consortium
Marija Veličković, Ruo-Nan Wu, Yu-Qian Gao, M. Thairu +20 more
2024Nature Chemical Biology25 citations Open access
Semantic Scholar
Analytical platform evaluation for quantification of ERG in prostate cancer using protein and mRNA detection methods
Jintang He, A. Schepmoes, Tu-Jin Shi, Chaochao Wu +20 more
2015Journal of Translational Medicine25 citations Open access
Semantic Scholar
Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial Stage of Plant Cell Wall Recognition in Neurospora crassa
M. A. Horta, Nils Thieme, Yu-Qian Gao, K. Burnum-Johnson +14 more
2019bioRxiv23 citations Open access
Semantic Scholar
Metabolic engineering to improve production of 3-hydroxypropionic acid from corn-stover hydrolysate in Aspergillus species
Z. Dai, Kyle R. Pomraning, Shuang Deng, Joonhoon Kim +11 more
2023Biotechnology for Biofuels and Bioproducts22 citations Open access
Semantic Scholar
Proteomic assessment of serum biomarkers of longevity in older men
E. Orwoll, J. Wiedrick, C. Nielson, Jon M. Jacobs +9 more
2020Aging Cell22 citations Open access
Semantic Scholar
Deep-Dive Targeted Quantification for Ultrasensitive Analysis of Proteins in Nondepleted Human Blood Plasma/Serum and Tissues
S. Nie, Tu-Jin Shi, T. Fillmore, A. Schepmoes +8 more
2017Analytical Chemistry20 citations Open access
Semantic Scholar
Advanced multi-modal mass spectrometry imaging reveals functional differences of placental villous compartments at microscale resolution
Marija Veličković, Leena Kadam, Joonhoon Kim, Kevin J. Zemaitis +12 more
2025Nature Communications19 citations Open access
Semantic Scholar
Regulated Phosphosignaling Associated with Breast Cancer Subtypes and Druggability*
Kuan-Lin Huang, Yi-Ge Wu, Tina M Primeau, Yi-Ting Wang +22 more
2019Molecular & Cellular Proteomics18 citations Open access
Semantic Scholar
Retrobiosynthesis of unnatural lactams via reprogrammed polyketide synthase
Namil Lee, Matthias Schmidt, Chen-Yi Li, Connor J. Filbin +22 more
2025Nature Catalysis17 citations Open access
Semantic Scholar
Engineering transcriptional regulation of pentose metabolism in Rhodosporidium toruloides for improved conversion of xylose to bioproducts
S. Coradetti, Paulina Adamczyk, Di Liu, Yu-Qian Gao +8 more
2023Microbial Cell Factories17 citations Open access
Semantic Scholar
Integration of Proteomics and Metabolomics Into the Design, Build, Test, Learn Cycle to Improve 3-Hydroxypropionic Acid Production in Aspergillus pseudoterreus
Kyle R. Pomraning, Z. Dai, N. Munoz, Young-Mo Kim +16 more
2021Frontiers in Bioengineering and Biotechnology17 citations Open access
Semantic Scholar
Multiplexed targeted mass spectrometry assays for prostate cancer-associated urinary proteins
Tu-Jin Shi, Sue‐Ing Quek, Yu-Qian Gao, C. Nicora +11 more
2017OncoTarget17 citations Open access
Semantic Scholar
Targeted quantification of functional enzyme dynamics in environmental samples for microbially mediated biogeochemical processes
Min-Jing Li, Yu-Qian Gao, W. Qian, Liang Shi +9 more
2017Environmental Microbiology Reports16 citations
Semantic Scholar
Trauma-associated Human Neutrophil Alterations Revealed by Comparative Proteomics Profiling
Jian-Ying Zhou, R. Krovvidi, Yu-Qian Gao, H. Gao +18 more
2013PROTEOMICS - Clinical Applications16 citations Open access
Semantic Scholar
The oleaginous yeast Rhodosporidium toruloides engineered for biomass hydrolysate-derived (E)-⍺-bisabolene production.
Paul A. Adamczyk, Hee Jin Hwang, T. Chang, Yu-Qian Gao +10 more
2025Metabolic Engineering15 citations Open access
Semantic Scholar
An alpha-synuclein MRM assay with diagnostic potential for Parkinson’s disease and monitoring disease progression
Li Yang, Tessandra H. Stewart, Min Shi, G. Pottiez +12 more
2017PROTEOMICS - Clinical Applications15 citations Open access
Semantic Scholar
Proteomic Tissue-Based Classifier for Early Prediction of Prostate Cancer Progression
Yu-Qian Gao, Yi-Ting Wang, Yong-Mei Chen, Hui Wang +18 more
2020Cancers14 citations Open access
Semantic Scholar
High-Throughput Large-Scale Targeted Proteomics Assays for Quantifying Pathway Proteins in Pseudomonas putida KT2440
Yu-Qian Gao, T. Fillmore, N. Munoz, Gayle J. Bentley +18 more
2020Frontiers in Bioengineering and Biotechnology14 citations Open access
Semantic Scholar
Itaconic acid production is regulated by LaeA in Aspergillus pseudoterreus
Kyle R. Pomraning, Z. Dai, N. Munoz, Young-Mo Kim +14 more
2022Metabolic Engineering Communications13 citations Open access
Semantic Scholar
Elucidating regulatory processes of intense physical activity by multi-omics analysis
E. Nakayasu, M. Gritsenko, Young-Mo Kim, J. Kyle +16 more
2023Military Medical Research12 citations Open access
Semantic Scholar
Complement Proteins Identify Rapidly Progressive Diabetic Kidney Disease
D. Yun, Sohyun Bae, Yu-Qian Gao, Lauren N. Lopez +13 more
2025Kidney International Reports11 citations Open access
Semantic Scholar
Quantification of mutant SPOP proteins in prostate cancer using mass spectrometry-based targeted proteomics
Hui Wang, C. Barbieri, Jintang He, Yu-Qian Gao +15 more
2017Journal of Translational Medicine10 citations Open access
Semantic Scholar
Decrease in multiple complement proteins associated with development of islet autoimmunity and type 1 diabetes
B. Webb-Robertson, E. Nakayasu, F. Dong, K. Waugh +11 more
2023iScience9 citations Open access
Semantic Scholar
Rapidly Assessing the Quality of Targeted Proteomics Experiments through Monitoring Stable-Isotope Labeled Standards
Bryson C. Gibbons, T. Fillmore, Yu-Qian Gao, Ronald J. Moore +4 more
2018bioRxiv9 citations Open access
Semantic Scholar

Frequent co-authors

Invite them to SciRah by sharing their profile.

T. Fillmore×21
Invite
T. Fillmore — researcher profile on SciRah
Tu-Jin Shi×19
Invite
Tu-Jin Shi — researcher profile on SciRah
W. Qian×18
Invite
W. Qian — researcher profile on SciRah
K. Burnum-Johnson×18
Invite
K. Burnum-Johnson — researcher profile on SciRah

×14

Invite

Tao Liu — researcher profile on SciRah

Richard D. Smith×14

Invite

Richard D. Smith — researcher profile on SciRah

Invite

C. Nicora — researcher profile on SciRah

B. Webb-Robertson×12

Invite

B. Webb-Robertson — researcher profile on SciRah

Invite

K. Rodland — researcher profile on SciRah

J. Magnuson×11

Invite

J. Magnuson — researcher profile on SciRah

A. Schepmoes×10

Invite

A. Schepmoes — researcher profile on SciRah

Joonhoon Kim×10

Invite

Joonhoon Kim — researcher profile on SciRah