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Deepanwita Banerjee · SciRah

Researcher profile · Semantic Scholar

Deepanwita Banerjee

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Deepanwita Banerjee — researcher profile on SciRah

h-index: 14
Works: 34
Citations: 679

Most-cited papers

Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale
Deepanwita Banerjee, Thomas Eng, Andrew K. Lau, Yusuke Sasaki +10 more
2020Nature Communications121 citations Open access
Semantic Scholar
Perspectives for self-driving labs in synthetic biology.
H. Martín, Tijana Radivojević, J. Zucker, K. Bouchard +18 more
2022Current Opinion in Biotechnology104 citations Open access
Semantic Scholar
Generation of Pseudomonas putida KT2440 Strains with Efficient Utilization of Xylose and Galactose via Adaptive Laboratory Evolution
H. Lim, Thomas Eng, Deepanwita Banerjee, Geovanni Alarcon +7 more
2021ACS Sustainable Chemistry and Engineering55 citations Open access
Semantic Scholar
Systems and synthetic biology tools for advanced bioproduction hosts.
Yan Chen, Deepanwita Banerjee, A. Mukhopadhyay, C. Petzold
2020Current Opinion in Biotechnology51 citations Open access
Semantic Scholar
Engineering Pseudomonas putida for efficient aromatic conversion to bioproduct using high throughput screening in a bioreactor.
Thomas Eng, Deepanwita Banerjee, Andrew K. Lau, E. Bowden +6 more
2021Metabolic Engineering45 citations Open access
Semantic Scholar
Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering.
Thomas Eng, Deepanwita Banerjee, Javier Menasalvas, Yan Chen +14 more
2023Cell Reports36 citations Open access
Semantic Scholar
Tuning a high performing multiplexed-CRISPRi Pseudomonas putida strain to further enhance indigoidine production
Jeffrey J. Czajka, Deepanwita Banerjee, Thomas Eng, Javier Menasalvas +7 more
2022Metabolic Engineering Communications32 citations Open access
Semantic Scholar
Perspective on Lignin Conversion Strategies That Enable Next Generation Biorefineries.
Shilva Shrestha, Shubhasish Goswami, Deepanwita Banerjee, Valentina E. Garcia +10 more
2024ChemSusChem29 citations Open access
Semantic Scholar
Genome-scale and pathway engineering for the sustainable aviation fuel precursor isoprenol production in Pseudomonas putida.
Deepanwita Banerjee, I. Yunus, Xi Wang, Jinho Kim +12 more
2024Metabolic Engineering24 citations Open access
Semantic Scholar
A scalable metabolite supplementation strategy against antibiotic resistant pathogen Chromobacterium violaceum induced by NAD+/NADH+ imbalance
Deepanwita Banerjee, Dharmeshkumar Parmar, Nivedita Bhattacharya, Avinash D. Ghanate +2 more
2017BMC Systems Biology21 citations Open access
Semantic Scholar
Perspectives in growth production trade-o ﬀ in microbial bioproduction
Deepanwita Banerjee, A. Mukhopadhyay
19 citations
Semantic Scholar
Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation
M. Wehrs, M. Thompson, Deepanwita Banerjee, Jan-Philip Prahl +8 more
2020Microbial Cell Factories15 citations Open access
Semantic Scholar
Addressing genome scale design tradeoffs in Pseudomonas putida for bioconversion of an aromatic carbon source
Deepanwita Banerjee, Javier Menasalvas, Yan Chen, Jennifer W. Gin +4 more
2025npj Systems Biology and Applications14 citations Open access
Semantic Scholar
Constraints-based analysis identifies NAD+ recycling through metabolic reprogramming in antibiotic resistant Chromobacterium violaceum
Deepanwita Banerjee, A. Raghunathan
2019PLoS ONE14 citations Open access
Semantic Scholar
Knowledge, Attitude and Practice of Antibiotic Use and Antimicrobial Resistance:A Study Post the ‘Red Line’ Initiative
Deepanwita Banerjee, A. Raghunathan
201813 citations Open access
Semantic Scholar
Microbial Pathways for Cost-Effective Low-Carbon Renewable Indigoidine
Nawa Raj Baral, Deepanwita Banerjee, Thomas Eng, B. Simmons +2 more
2025ACS Sustainable Chemistry and Engineering12 citations Open access
Semantic Scholar
Economic and Environmental Trade-Offs of Simultaneous Sugar and Lignin Utilization for Biobased Fuels and Chemicals
Nawa Raj Baral, Deepanwita Banerjee, A. Mukhopadhyay, B. Simmons +2 more
2023ACS Sustainable Chemistry & Engineering11 citations
Semantic Scholar
Improving microbial bioproduction under low-oxygen conditions.
Shawn Kulakowski, Deepanwita Banerjee, C. Scown, A. Mukhopadhyay
2023Current Opinion in Biotechnology11 citations
Semantic Scholar
Integrated constraints based analysis of an engineered violacein pathway in Escherichia coli
S. C. Immanuel, Deepanwita Banerjee, Mayooreshwar P. Rajankar, A. Raghunathan
2018Biosyst.11 citations
Semantic Scholar
Sustainable production of 2,3,5,6-tetramethylpyrazine at high titer in engineered Corynebacterium glutamicum.
A. Srinivasan, Kevin Chen-Xiao, Deepanwita Banerjee, A. Oka +5 more
2024Journal of Industrial Microbiology & Biotechnology9 citations Open access
Semantic Scholar
Genome-scale metabolic rewiring to achieve predictable titers rates and yield of a non-native product at scale
Deepanwita Banerjee, Thomas Eng, Andrew K. Lau, B. Wang +10 more
2020bioRxiv8 citations Open access
Semantic Scholar
Integration of genome-scale metabolic model with biorefinery process model reveals market-competitive carbon-negative sustainable aviation fuel utilizing microbial cell mass lipids and biogenic CO2
Nawa Raj Baral, Deepanwita Banerjee, A. Mukhopadhyay, B. Simmons +2 more
2024BioResources7 citations Open access
Semantic Scholar
Genome-scale and pathway engineering for the sustainable aviation fuel precursor isoprenol production in Pseudomonas putida
Deepanwita Banerjee, I. Yunus, Xi Wang, Jinho Kim +10 more
2023bioRxiv7 citations Open access
Semantic Scholar
Genomics Characterization of an engineered Corynebacterium glutamicum in Bioreactor Cultivation under Ionic Liquid Stress
Deepanwita Banerjee, Thomas Eng, Yusuke Sasaki, A. Srinivasan +9 more
2021bioRxiv7 citations Open access
Semantic Scholar
Influence of titer, rate, yield, and scale on the cost and life-cycle emissions of biomanufacturing.
Nawa Raj Baral, Min-Liang Yang, Deepanwita Banerjee, A. Mukhopadhyay +4 more
2026Trends in Biotechnology5 citations Open access
Semantic Scholar
High Throughput Fitness Profiling Reveals Loss Of GacS-GacA Regulation Improves Indigoidine Production In Pseudomonas putida
Thomas Eng, Deepanwita Banerjee, Andrew K. Lau, E. Bowden +6 more
2021bioRxiv2 citations Open access
Semantic Scholar
Optimizing a High Performing Multiplex-CRISPRi P. putida Strain with Integrated Metabolomics and 13C-Metabolic Flux Analyses
Jeffrey J. Czajka, Deepanwita Banerjee, Thomas Eng, Javier Menasalvas +7 more
2021bioRxiv1 citations Open access
Semantic Scholar
Cost and carbon implications of flexible biomanufacturing to produce bio-based gasoline, jet fuel, and platform chemicals
Nawa Raj Baral, Thomas Eng, Deepanwita Banerjee, Blake A. Simmons +2 more
2026Chemical Engineering Journal0 citations Open access
Semantic Scholar
Direct Colony Atmospheric Pressure Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Assay for Targeted Operon Metabolite Analysis.
Nivedita Bhattacharya, Deepanwita Banerjee, Caleigh O'Connor, Dharmeshkumar Parmar +4 more
2025Methods in molecular biology0 citations
Semantic Scholar
Bottlenecks in the Implementation of Genome Scale Metabolic Model Based Designs for Bioproduction from Aromatic Carbon Sources
Deepanwita Banerjee, Javier Menasalvas, Yan Chen, Jennifer W. Gin +4 more
2024bioRxiv0 citations Open access
Semantic Scholar
Ensemble and Iterative Engineering for Maximized Bioconversion to the Blue Pigment, Indigoidine from Non-Canonical Sustainable Carbon Sources
Thomas Eng, Deepanwita Banerjee, Javier Menasalvas, Yan Chen +14 more
2023bioRxiv0 citations Open access
Semantic Scholar
Sustainable production of 2,3,5,6-Tetramethylpyrazine at high titer in engineered Corynebacterium glutamicum using statistical design of experiments
A. Srinivasan, Kevin Chen-Xiao, Deepanwita Banerjee, A. Oka +5 more
2023bioRxiv0 citations Open access
Semantic Scholar
Genomics Characterization of an Engineered Corynebacterium glutamicum in Bioreactor Cultivation Under Ionic Liquid Stress
Deepanwita Banerjee, Thomas Eng, Yusuke Sasaki, A. Srinivasan +9 more
2021Frontiers in Bioengineering and Biotechnology0 citations Open access
Semantic Scholar
Population dynamics analysis of Saccharomyces cerevisiae deletion library during fed-batch cultivation using Bar-seq
M. Wehrs, M. Thompson, Deepanwita Banerjee, Jan-Philip Prahl +8 more
2020bioRxiv0 citations Open access
Semantic Scholar

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