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S. Pesant · SciRah

Researcher profile · Semantic Scholar

S. Pesant

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S. Pesant — researcher profile on SciRah

h-index: 43
Works: 212
Citations: 14K

Most-cited papers

Structure and function of the global ocean microbiome
S. Sunagawa, Luis Pedro Coelho, Samuel Chaffron, J. Kultima +46 more
2015Science2,614 citations Open access
Semantic Scholar
Eukaryotic plankton diversity in the sunlit ocean
C. de Vargas, S. Audic, N. Henry, J. Decelle +50 more
2015Science1,818 citations Open access
Semantic Scholar
Determinants of community structure in the global plankton interactome
G. Lima-Mendez, K. Faust, N. Henry, J. Decelle +46 more
2015Science916 citations Open access
Semantic Scholar
Plankton networks driving carbon export in the oligotrophic ocean
L. Guidi, Samuel Chaffron, L. Bittner, D. Eveillard +35 more
2016Nature782 citations Open access
Semantic Scholar
Marine DNA viral macro- and micro-diversity from pole to pole
A. Gregory, A. Zayed, N. Conceição-Neto, B. Temperton +48 more
2019Cell730 citations Open access
Semantic Scholar
Patterns and ecological drivers of ocean viral communities
J. Brum, J. Ignacio-Espinoza, S. Roux, G. Doulcier +27 more
2015Science696 citations Open access
Semantic Scholar
Tara Oceans: towards global ocean ecosystems biology
S. Sunagawa, S. Acinas, P. Bork, C. Bowler +11 more
2020Nature Reviews Microbiology405 citations
Semantic Scholar
Global Trends in Marine Plankton Diversity across Kingdoms of Life
F. Ibarbalz, N. Henry, Manoela C. Brandão, S. Martini +55 more
2019Cell388 citations Open access
Semantic Scholar
Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
G. Salazar, L. Paoli, A. Alberti, J. Huerta-Cepas +51 more
2019Cell376 citations Open access
Semantic Scholar
A global ocean atlas of eukaryotic genes
Q. Carradec, É. Pelletier, C. da Silva, A. Alberti +49 more
2018Nature Communications337 citations Open access
Semantic Scholar
The ocean sampling day consortium
A. Kopf, M. Bicak, R. Kottmann, J. Schnetzer +153 more
2015GigaScience204 citations Open access
Semantic Scholar
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities
S. Acinas, Pablo Sánchez, G. Salazar, F. Cornejo-Castillo +25 more
2021Communications Biology189 citations Open access
Semantic Scholar
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
Simon Roux, J. Brum, B. Dutilh, S. Sunagawa +20 more
2016Nature173 citations Open access
Semantic Scholar
Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria
T. Grébert, Hugo Doré, F. Partensky, Gregory K. Farrant +9 more
2018Proceedings of the National Academy of Sciences of the United States of America117 citations Open access
Semantic Scholar
The European Nucleotide Archive in 2020
Peter W. Harrison, Alisha Ahamed, Raheela Aslam, Blaise T. F. Alako +28 more
2020Nucleic Acids Res.111 citations Open access
Semantic Scholar
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
D. Richter, R. Watteaux, Thomas Vannier, Jade Leconte +43 more
2019bioRxiv98 citations Open access
Semantic Scholar
The European Nucleotide Archive in 2022
J. Burgin, Alisha Ahamed, C. Cummins, Rajkumar Devraj +27 more
2022Nucleic Acids Res.95 citations Open access
Semantic Scholar
Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean
M. Royo-Llonch, Pablo Sánchez, C. Ruiz-González, G. Salazar +36 more
2021Nature Microbiology94 citations Open access
Semantic Scholar
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition
A. Alberti, J. Poulain, S. Engelen, K. Labadie +44 more
2017Scientific Data93 citations Open access
Semantic Scholar
The European Nucleotide Archive in 2023
D. Yuan, Alisha Ahamed, J. Burgin, C. Cummins +30 more
2023Nucleic Acids Research90 citations Open access
Semantic Scholar
Descriptor : Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition
P. Bazire, Odette Beluche, Laurie Bertrand, Marielle Besnard-Gonnet +50 more
201789 citations
Semantic Scholar
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
Yoann Seeleuthner, Samuel Mondy, V. Lombard, Q. Carradec +46 more
2018Nature Communications85 citations Open access
Semantic Scholar
Biogeography and diversity of Collodaria (Radiolaria) in the global ocean
Tristan Biard, E. Bigeard, S. Audic, J. Poulain +4 more
2017The ISME Journal81 citations Open access
Semantic Scholar
The European Nucleotide Archive in 2021
C. Cummins, Alisha Ahamed, Raheela Aslam, J. Burgin +34 more
2021Nucleic Acids Res.68 citations Open access
Semantic Scholar
The Tara Pacific expedition—A pan-ecosystemic approach of the “-omics” complexity of coral reef holobionts across the Pacific Ocean
S. Planes, D. Allemand, S. Agostini, B. Banaigs +26 more
2019PLoS Biology67 citations Open access
Semantic Scholar
Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems
A. Capotondi, M. Jacox, C. Bowler, M. Kavanaugh +27 more
2019Frontiers in Marine Science62 citations Open access
Semantic Scholar
Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean
C. Hochart, L. Paoli, H. Ruscheweyh, G. Salazar +37 more
2023Nature Communications60 citations Open access
Semantic Scholar
Macroscale patterns of oceanic zooplankton composition and size structure
Manoela C. Brandão, F. Benedetti, S. Martini, Y. D. Soviadan +36 more
2021Scientific Reports60 citations Open access
Semantic Scholar
The European Nucleotide Archive in 2024
Colman O'Cathail, Alisha Ahamed, J. Burgin, C. Cummins +28 more
2024Nucleic Acids Research59 citations
Semantic Scholar
Diversity of the Pacific Ocean coral reef microbiome
P. Galand, H. Ruscheweyh, G. Salazar, C. Hochart +37 more
2023Nature Communications59 citations Open access
Semantic Scholar
Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)
G. Gorsky, G. Bourdin, F. Lombard, M. Pedrotti +52 more
2019Frontiers in Marine Science54 citations Open access
Semantic Scholar
Vertical distribution of chlorophyll a concentration and phytoplankton community composition from in situ fluorescence profiles: a first database for the global ocean
R. Sauzède, H. Lavigne, H. Claustre, J. Uitz +4 more
201542 citations Open access
Semantic Scholar
Disparate genetic divergence patterns in three corals across a pan-Pacific environmental gradient highlight species-specific adaptation
C. Voolstra, B. Hume, E. Armstrong, Guinther Mitushasi +34 more
2023npj Biodiversity35 citations Open access
Semantic Scholar
The Ocean Gene Atlas v2.0: online exploration of the biogeography and phylogeny of plankton genes
Caroline Vernette, J. Lecubin, Pablo Sánchez, S. Acinas +28 more
2022Nucleic Acids Res.33 citations Open access
Semantic Scholar
Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems
F. Lombard, G. Bourdin, S. Pesant, S. Agostini +54 more
2023Scientific Data32 citations Open access
Semantic Scholar
Metabolic Architecture of the Deep Ocean Microbiome
S. Acinas, Pablo Sánchez, G. Salazar, F. Cornejo-Castillo +24 more
2019bioRxiv32 citations Open access
Semantic Scholar
Pervasive tandem duplications and convergent evolution shape coral genomes
B. Noël, F. Denoeud, A. Rouan, Carol Buitrago-López +42 more
2023Genome Biology30 citations Open access
Semantic Scholar
Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition
Caroline Belser, J. Poulain, K. Labadie, F. Gavory +81 more
2022Scientific Data27 citations Open access
Semantic Scholar
Marine picoplankton metagenomes and MAGs from eleven vertical profiles obtained by the Malaspina Expedition
Pablo Sánchez, Felipe H. Coutinho, Marta Sebastián, Massimo C. Pernice +15 more
2024Scientific Data23 citations Open access
Semantic Scholar
Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean
E. Armstrong, J. Lê-Hoang, Q. Carradec, J. Aury +37 more
2023Nature Communications19 citations Open access
Semantic Scholar
Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes
A. Veglia, Kalia S. I. Bistolas, C. Voolstra, B. Hume +30 more
2023Communications Biology19 citations Open access
Semantic Scholar
Tara Pacific Expedition’s Atmospheric Measurements of Marine Aerosols across the Atlantic and Pacific Oceans: Overview and Preliminary Results
J. Flores, G. Bourdin, O. Altaratz, M. Trainic +35 more
2020Bulletin of The American Meteorological Society - (BAMS)19 citations Open access
Semantic Scholar
Terminology supported archiving and publication of environmental science data in PANGAEA.
M. Diepenbroek, Uwe Schindler, R. Huber, S. Pesant +4 more
2017Journal of Biotechnology19 citations Open access
Semantic Scholar
The European Nucleotide Archive in 2025
D. Yuan, Alisha Ahamed, Awais Athar, R. Devaraj +24 more
2025Nucleic Acids Research18 citations Open access
Semantic Scholar
Inter-comparison of marine microbiome sampling protocols
Francisco Pascoal, M. Tomasino, R. Piredda, G. Quero +25 more
2023ISME Communications16 citations Open access
Semantic Scholar
Mission Tara Microplastics: a holistic set of protocols and data resources for the field investigation of plastic pollution along the land-sea continuum in Europe
J. Ghiglione, V. Barbe, S. Bruzaud, G. Burgaud +79 more
2023Environmental science and pollution research international16 citations Open access
Semantic Scholar
Multi-omics determination of metabolome diversity in natural coral populations in the Pacific Ocean
M. M. Reddy, Corentine Goossens, Yuxiang Zhou, Slimane Chaib +28 more
2023Communications Earth & Environment15 citations Open access
Semantic Scholar
Peer Review #2 of "A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters (v0.1)"
Clara Jégousse, P. Vannier, R. Groben, F. Glöckner +456 more
202115 citations Open access
Semantic Scholar
Ocean-wide comparisons of mesopelagic planktonic community structures
Janaina Rigonato, M. Budinich, A. Murillo, Manoela C. Brandão +43 more
2021bioRxiv12 citations Open access
Semantic Scholar
Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria and Archaea Along a Mediterranean—Atlantic Gradient
B. Trouche, M. Brandt, Caroline Belser, C. Orejas +6 more
2021Frontiers in Microbiology10 citations Open access
Semantic Scholar

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