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F. Glöckner · SciRah

Researcher profile · Semantic Scholar

F. Glöckner

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F. Glöckner — researcher profile on SciRah

h-index: 80
Works: 288
Citations: 84K

Most-cited papers

The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
R. Nilsson, K. Larsson, A. Taylor, J. Bengtsson-Palme +9 more
2018Nucleic Acids Res.3,178 citations Open access
Semantic Scholar
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
R. Bowers, N. Kyrpides, R. Stepanauskas, M. Harmon-Smith +50 more
2017Nature Biotechnology2,286 citations Open access
Semantic Scholar
25 years of serving the community with ribosomal RNA gene reference databases and tools.
F. Glöckner, P. Yilmaz, C. Quast, J. Gerken +7 more
2017Journal of Biotechnology850 citations Open access
Semantic Scholar
Minimum Information about a Biosynthetic Gene cluster
M. Medema, R. Kottmann, P. Yilmaz, M. Cummings +150 more
2015Nature Chemical Biology819 citations Open access
Semantic Scholar
Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms
H. Teeling, B. Fuchs, C. Bennke, Karen Krüger +11 more
2016eLife414 citations Open access
Semantic Scholar
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
N. Kyrpides, P. Hugenholtz, J. Eisen, T. Woyke +60 more
2014PLoS Biology208 citations Open access
Semantic Scholar
The ocean sampling day consortium
A. Kopf, M. Bicak, R. Kottmann, J. Schnetzer +153 more
2015GigaScience204 citations Open access
Semantic Scholar
PANGAEA - Data Publisher for Earth & Environmental Science
J. Felden, Lars Möller, Uwe Schindler, R. Huber +4 more
2023Scientific Data188 citations Open access
Semantic Scholar
Expanding the World of Marine Bacterial and Archaeal Clades
P. Yilmaz, P. Yarza, J. Rapp, F. Glöckner
2016Frontiers in Microbiology143 citations Open access
Semantic Scholar
Determinants and Prediction of Esterase Substrate Promiscuity Patterns.
M. Martínez-Martínez, C. Coscolín, Gerard Santiago, J. Chow +38 more
2017ACS Chemical Biology136 citations Open access
Semantic Scholar
A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms
Stefanos Banos, Guillaume Lentendu, A. Kopf, T. Wubet +2 more
2018BMC Microbiology120 citations Open access
Semantic Scholar
SILVA in 2026: a global core biodata resource for rRNA within the DSMZ digital diversity
M. Chuvochina, J. Gerken, Martinique Frentrup, Yeliz Sandikci +9 more
2025Nucleic Acids Research115 citations
Semantic Scholar
Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane.
V. Krukenberg, K. Harding, Michael Richter, F. Glöckner +7 more
2016Environmental Microbiology105 citations Open access
Semantic Scholar
Phylogeny-aware identification and correction of taxonomically mislabeled sequences
A. Kozlov, Jiajie Zhang, P. Yilmaz, F. Glöckner +1 more
2016bioRxiv100 citations Open access
Semantic Scholar
Single-cell genomics of uncultivated deep-branching magnetotactic bacteria reveals a conserved set of magnetosome genes.
S. Kolinko, Michael Richter, F. Glöckner, A. Brachmann +1 more
2016Environmental Microbiology98 citations
Semantic Scholar
Unifying the known and unknown microbial coding sequence space
C. Vanni, M. Schechter, S. Acinas, A. Barberán +13 more
2020bioRxiv90 citations Open access
Semantic Scholar
Repositories for Taxonomic Data: Where We Are and What is Missing
A. Miralles, Teddy Bruy, K. Wolcott, M. Scherz +18 more
2020Systematic Biology84 citations Open access
Semantic Scholar
Three Novel Species with Peptidoglycan Cell Walls form the New Genus Lacunisphaera gen. nov. in the Family Opitutaceae of the Verrucomicrobial Subdivision 4
P. Rast, Ines Glöckner, C. Boedeker, O. Jeske +8 more
2017Frontiers in Microbiology81 citations Open access
Semantic Scholar
UniEuk: Time to Speak a Common Language in Protistology!
Cédric Berney, Andreea Ciuprina, Sara J. Bender, J. Brodie +21 more
2017Journal of Eukaryotic Microbiology75 citations Open access
Semantic Scholar
Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
R. Bowers, N. Kyrpides, R. Stepanauskas, M. Harmon-Smith +50 more
2018Nature Biotechnology66 citations Open access
Semantic Scholar
Diversity of fall armyworm, Spodoptera frugiperda and their gut bacterial community in Kenya
J. Gichuhi, Sevgan Subramanian, F. Khamis, J. van den Berg +366 more
2019bioRxiv65 citations Open access
Semantic Scholar
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences
R. Drysdale, Charles E. Cook, R. Petryszak, Vivienne Baillie-Gerritsen +41 more
2019bioRxiv64 citations Open access
Semantic Scholar
Surface properties of SAR11 bacteria facilitate grazing avoidance
A. Dadon-Pilosof, K. Conley, Yuval Jacobi, M. Haber +10 more
2017Nature Microbiology62 citations
Semantic Scholar
The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria.
Cyrielle Jan, J. Petersen, Johannes Werner, H. Teeling +7 more
2014Environmental Microbiology58 citations Open access
Semantic Scholar
Decoding the ocean's microbiological secrets for marine enzyme biodiscovery
M. Ferrer, Celia Méndez-García, R. Bargiela, J. Chow +25 more
2018FEMS Microbiology Letters52 citations Open access
Semantic Scholar
A phylogenetic framework for the kingdom Fungi based on 18S rRNA gene sequences.
P. Yarza, P. Yilmaz, Katrin Panzer, F. Glöckner +1 more
2017Marine Genomics49 citations Open access
Semantic Scholar
Fast and accurate average genome size and 16S rRNA gene average copy number computation in metagenomic data
Emiliano Pereira-Flores, F. Glöckner, A. Fernàndez-Guerra
2019BMC Bioinformatics48 citations Open access
Semantic Scholar
The SILVA Database Project: An ELIXIR core data resource for high-quality ribosomal RNA sequences
F. Glöckner
2019Biodiversity Information Science and Standards43 citations Open access
Semantic Scholar
On-Site Analysis of Bacterial Communities of the Ultraoligotrophic South Pacific Gyre
G. Reintjes, H. E. Tegetmeyer, Miriam Bürgisser, S. Orlić +9 more
2019Applied and Environmental Microbiology42 citations Open access
Semantic Scholar
Seasonal Dynamics of Pelagic Mycoplanktonic Communities: Interplay of Taxon Abundance, Temporal Occurrence, and Biotic Interactions
Stefanos Banos, D. Gysi, Tim Richter-Heitmann, F. Glöckner +5 more
2020Frontiers in Microbiology40 citations Open access
Semantic Scholar
Succession and dynamics of Pristionchus nematodes and their microbiome during decomposition of Oryctes borbonicus on La Réunion Island
Jan M. Meyer, P. Baskaran, C. Quast, Vladislav Susoy +3 more
2017Environmental Microbiology40 citations Open access
Semantic Scholar
SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees
A. Beccati, J. Gerken, C. Quast, P. Yilmaz +1 more
2017BMC Bioinformatics37 citations Open access
Semantic Scholar
The All-Species Living Tree Project
P. Yarza, Raúl Muñoz, J. Euzéby, W. Ludwig +4 more
201435 citations Open access
Semantic Scholar
Analysis of Bacterial Communities on North Sea Macroalgae and Characterization of the Isolated Planctomycetes Adhaeretor mobilis gen. nov., sp. nov., Roseimaritima multifibrata sp. nov., Rosistilla ulvae sp. nov. and Rubripirellula lacrimiformis sp. nov.
S. Wiegand, P. Rast, Nicolai Kallscheuer, M. Jogler +10 more
2021Microorganisms34 citations Open access
Semantic Scholar
Analysis of bacterial communities in a municipal duck pond during a phytoplankton bloom and isolation of Anatilimnocola aggregata, Lacipirellula limnantha and Urbifossiella limnaia belonging to the phylum Planctomycetes.
Nicolai Kallscheuer, P. Rast, M. Jogler, S. Wiegand +8 more
2020Environmental Microbiology33 citations Open access
Semantic Scholar
Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases
Gerhard Mayer, Wolfgang Mueller, K. Schork, Julian Uszkoreit +21 more
2021Briefings Bioinform.22 citations Open access
Semantic Scholar
Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards
P. ten Hoopen, S. Pesant, R. Kottmann, A. Kopf +10 more
2015Standards in Genomic Sciences22 citations Open access
Semantic Scholar
The North Sea goes viral: Occurrence and distribution of North Sea bacteriophages.
Alexa Garin-Fernandez, Emiliano Pereira-Flores, F. Glöckner, A. Wichels
2018Marine Genomics21 citations Open access
Semantic Scholar
Comparative Genomic Analysis Reveals a Diverse Repertoire of Genes Involved in Prokaryote-Eukaryote Interactions within the Pseudovibrio Genus
S. Romano, A. Fernàndez-Guerra, F. Reen, F. Glöckner +6 more
2016Frontiers in Microbiology20 citations Open access
Semantic Scholar
Analysis of bacterial communities in a municipal duck pond during a phytoplankton bloom and isolation of Anatilimnocola aggregata gen. nov., sp. nov., Lacipirellula limnantheis sp. nov. and Urbifossiella limnaea gen. nov., sp. nov. belonging to the phylum Planctomycetes
Nicolai Kallscheuer, P. Rast, M. Jogler, S. Wiegand +8 more
202119 citations
Semantic Scholar
Taxonomic and functional diversity of a coastal planktonic bacterial community in a river-influenced marine area.
S. Thiele, Michael Richter, C. Balestra, F. Glöckner +1 more
2017Marine Genomics18 citations
Semantic Scholar
Metatranscriptome of marine bacterioplankton during winter time in the North Sea assessed by total RNA sequencing.
A. Kopf, I. Kostadinov, A. Wichels, C. Quast +1 more
2015Marine Genomics17 citations Open access
Semantic Scholar
Meta-omics data and collection objects (MOD-CO): a conceptual schema and data model for processing sample data in meta-omics research
G. Rambold, P. Yilmaz, J. Harjes, Sabrina Klaster +4 more
2019Database J. Biol. Databases Curation16 citations Open access
Semantic Scholar
Peer Review #2 of "A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters (v0.1)"
Clara Jégousse, P. Vannier, R. Groben, F. Glöckner +456 more
202115 citations Open access
Semantic Scholar
AGNOSTOS-DB: a resource to unlock the uncharted regions of the coding sequence space
C. Vanni, M. Schechter, T. Delmont, A. M. Eren +3 more
2021bioRxiv11 citations Open access
Semantic Scholar
Mining metagenomes for natural product biosynthetic gene clusters: unlocking new potential with ultrafast techniques
Emiliano Pereira-Flores, M. Medema, P. Buttigieg, P. Meinicke +2 more
2021bioRxiv10 citations Open access
Semantic Scholar
Genomic characterization of filamentous phage vB_VpaI_VP-3218, an inducible prophage of Vibrio parahaemolyticus.
Alexa Garin-Fernandez, F. Glöckner, A. Wichels
2020Marine Genomics10 citations
Semantic Scholar
NFDI4BioDiversity - A Consortium for the National Research Data Infrastructure (NFDI)
F. Glöckner, M. Diepenbroek, J. Felden, Anton Güntsch +14 more
20209 citations
Semantic Scholar
An Information System for European culture collections: the way forward
S. Casaregola, A. Vasilenko, P. Romano, V. Robert +4 more
2016SpringerPlus9 citations Open access
Semantic Scholar
Permanent draft genome of Rhodopirellula sallentina SM41.
C. Wegner, Michael Richter, Tim Richter-Heitmann, A. Klindworth +3 more
2014Marine Genomics8 citations
Semantic Scholar

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