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Sara R. Savage · SciRah

Researcher profile · Semantic Scholar

Sara R. Savage

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Sara R. Savage — researcher profile on SciRah

h-index: 23
Works: 59
Citations: 4,429

Most-cited papers

Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma
M. Gillette, Shankha Satpathy, Song Cao, S. Dhanasekaran +182 more
2020Cell713 citations Open access
Semantic Scholar
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S. Vasaikar, Chen Huang, Xiaojing Wang, V. Petyuk +78 more
2019Cell697 citations Open access
Semantic Scholar
Proteogenomic Characterization of Pancreatic Ductal Adenocarcinoma
L. Cao, Chen Huang, Daniel Cui Zhou, Ying-Wei Hu +52 more
2021Cell501 citations Open access
Semantic Scholar
Proteogenomic Characterization of Endometrial Carcinoma
Yong-Chao Dou, Emily A. Kawaler, Daniel Cui Zhou, M. Gritsenko +214 more
2020Cell416 citations Open access
Semantic Scholar
A proteogenomic portrait of lung squamous cell carcinoma
Shankha Satpathy, Karsten Krug, Pierre M. Jean Beltran, Sara R. Savage +70 more
2021Cell343 citations Open access
Semantic Scholar
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma
Chen Huang, Li-Jun Chen, Sara R. Savage, R. V. Eguez +65 more
2021Cancer Cell313 citations Open access
Semantic Scholar
Proteogenomic Data and Resources for Pan-Cancer Analysis
Yi-Ze Li, Yong-Chao Dou, Felipe da Veiga Leprevost, Yifat Geffen +75 more
2023Cancer Cell229 citations Open access
Semantic Scholar
Deep Learning in Proteomics
Bo Wen, Wen-feng Zeng, Yu-Xing Liao, Zhiao Shi +3 more
2020Proteomics144 citations Open access
Semantic Scholar
A highly annotated database of genes associated with platinum resistance in cancer
Dongqing Huang, Sara R. Savage, A. Calinawan, Chenwei Lin +5 more
2021Oncogene127 citations Open access
Semantic Scholar
Pan-cancer proteogenomics expands the landscape of therapeutic targets
Sara R. Savage, Xin-Pei Yi, Jonathan T. Lei, Bo Wen +13 more
2024Cell118 citations Open access
Semantic Scholar
Modulation of the Proteostasis Network Promotes Tumor Resistance to Oncogenic KRAS Inhibitors
Xiangdong Lv, Xuan Lu, Jin Cao, Qin Luo +35 more
2023Science112 citations Open access
Semantic Scholar
Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer
Shrabanti Chowdhury, Jacob J. Kennedy, Richard G. Ivey, Oscar D. Murillo +43 more
2023Cell82 citations Open access
Semantic Scholar
Multiomic analysis identifies CPT1A as a potential therapeutic target in platinum-refractory, high-grade serous ovarian cancer
Dongqing Huang, Shrabanti Chowdhury, Hong Wang, Sara R. Savage +26 more
2021Cell Reports Medicine59 citations Open access
Semantic Scholar
caAtlas: An immunopeptidome atlas of human cancer
Xin-Pei Yi, Yu-Xing Liao, Bo Wen, Kai Li +3 more
2021iScience56 citations Open access
Semantic Scholar
A proteogenomics data-driven knowledge base of human cancer
Yu-Xing Liao, Sara R. Savage, Yong-Chao Dou, Zhiao Shi +4 more
2023Cell Systems55 citations Open access
Semantic Scholar
Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources
Sara R. Savage, Bing Zhang
2020Clinical Proteomics54 citations Open access
Semantic Scholar
Proteogenomic insights suggest druggable pathways in endometrial carcinoma
Yong-Chao Dou, L. Katsnelson, M. Gritsenko, Ying-Wei Hu +159 more
2023Cancer Cell50 citations Open access
Semantic Scholar
Deep learning integrates histopathology and proteogenomics at a pan-cancer level
Joshua M. Wang, Run-Yu Hong, Elizabeth G. Demicco, Jimin Tan +119 more
2023Cell Reports Medicine46 citations Open access
Semantic Scholar
Hemin-Induced Death Models Hemorrhagic Stroke and Is a Variant of Classical Neuronal Ferroptosis
M. Zille, J. Oses-Prieto, Sara R. Savage, Saravanan S. Karuppagounder +6 more
2022Journal of Neuroscience36 citations Open access
Semantic Scholar
DeepMVP: deep learning models trained on high-quality data accurately predict PTM sites and variant-induced alterations
Bo Wen, Chen-Wei Wang, Kai Li, Ping Han +7 more
2025Nature Methods34 citations
Semantic Scholar
Peroxisome proliferator-activated receptor-β/δ regulates angiogenic cell behaviors and oxygen-induced retinopathy.
M. Capozzi, G. W. Mccollum, Sara R. Savage, J. Penn
2013Investigative Ophthalmology and Visual Science28 citations Open access
Semantic Scholar
Graph Algorithms for Condensing and Consolidating Gene Set Analysis Results*
Sara R. Savage, Zhiao Shi, Yu-Xing Liao, Bing Zhang
2019Molecular & Cellular Proteomics27 citations Open access
Semantic Scholar
Hypoxia-Induced Expression of VEGF Splice Variants and Protein in Four Retinal Cell Types
W. Watkins, G. W. Mccollum, Sara R. Savage, M. Capozzi +2 more
2013Experimental Eye Research26 citations Open access
Semantic Scholar
RNA-seq identifies a role for the PPARβ/δ inverse agonist GSK0660 in the regulation of TNFα-induced cytokine signaling in retinal endothelial cells
Sara R. Savage, G. W. Mccollum, Rong Yang, J. Penn
2015Molecular Vision21 citations
Semantic Scholar
The role of the NFAT signaling pathway in retinal neovascularization.
C. Bretz, Sara R. Savage, M. Capozzi, J. Penn
2013Investigative Ophthalmology and Visual Science21 citations Open access
Semantic Scholar
Targeting EIF4A triggers an interferon response to synergize with chemotherapy and suppress triple-negative breast cancer
N. Zhao, E. Kabotyanski, Alexander B. Saltzman, A. Malovannaya +17 more
2023bioRxiv20 citations Open access
Semantic Scholar
RNA-Seq Reveals a Role for NFAT-Signaling in Human Retinal Microvascular Endothelial Cells Treated with TNFα
Sara R. Savage, C. Bretz, J. Penn
2015PLoS ONE19 citations Open access
Semantic Scholar
The Peroxisome Proliferator-Activated Receptor-β/δ antagonist GSK0660 mitigates Retinal Cell Inflammation and Leukostasis
M. Capozzi, Sara R. Savage, G. W. Mccollum, Sandra S. Hammer +4 more
2019Experimental Eye Research18 citations Open access
Semantic Scholar
Comprehensive evaluation of phosphoproteomic-based kinase activity inference
S. Müller-Dott, E. Jaehnig, Khoi Pham Munchic, Wen Jiang +13 more
2025Nature Communications17 citations Open access
Semantic Scholar
NFAT isoforms play distinct roles in TNFα-induced retinal leukostasis
C. Bretz, Sara R. Savage, M. Capozzi, Sandra Suarez +1 more
2015Scientific Reports17 citations Open access
Semantic Scholar
Comprehensive evaluation of phosphoproteomic-based kinase activity inference
S. Müller-Dott, E. Jaehnig, Khoi Pham Munchic, Wen Jiang +13 more
2024bioRxiv14 citations Open access
Semantic Scholar
Proteomic-based stemness score measures oncogenic dedifferentiation and enables the identification of druggable targets
Iga Kołodziejczak-Guglas, Renan L. S. Simões, Emerson de Souza Santos, E. G. Demicco +123 more
2025Cell Genomics10 citations Open access
Semantic Scholar
Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer
Shrabanti Chowdhury, Jacob J. Kennedy, Richard G. Ivey, Oscar D. Murillo +43 more
2024Cell7 citations Open access
Semantic Scholar
IDPpub: Illuminating the Dark Phosphoproteome Through PubMed Mining
Sara R. Savage, Yao-Yun Zhang, E. Jaehnig, Yu-Xing Liao +4 more
2023Molecular & Cellular Proteomics7 citations Open access
Semantic Scholar
Targeting eIF4A triggers an interferon response to synergize with chemotherapy and suppress triple-negative breast cancer
N. Zhao, E. Kabotyanski, Alexander B. Saltzman, A. Malovannaya +17 more
2023Journal of Clinical Investigation4 citations Open access
Semantic Scholar
Abstract 1895: caAtlas: An immunopeptidome atlas of human cancer
Xin-Pei Yi, Yu-Xing Liao, Bo Wen, Kai Li +3 more
2021Immunology4 citations
Semantic Scholar
Characterizing the Risks and Harms of Linking Genomic Information to Individuals
Sara R. Savage
2017IEEE Security and Privacy4 citations
Semantic Scholar
A 15-layer multi-omics analysis of gastric cancer ecotypes provides therapeutic insights
Yuefan Wang, Lindsey K. Olsen, Fenglong Jiao, Chen-Wen Wang +108 more
2026Cell Reports Medicine3 citations Open access
Semantic Scholar
Frozen tissue coring and layered histological analysis improves cell type-specific proteogenomic characterization of pancreatic adenocarcinoma
Sara R. Savage, Yuefan Wang, Li-Jun Chen, S. Jewell +10 more
2024Clinical Proteomics3 citations Open access
Semantic Scholar
Fluorescent probe dyes for metabolic‐ion sensing under high hydrostatic pressures
P. Urayama, Eric W. Frey, Sara R. Savage
2010Annals of the New York Academy of Sciences3 citations
Semantic Scholar
The PGF2 FP Receptor Mediates Retinal Angiogenic Cell Behaviors In Vitro
Sara R. Savage, Rong Yang, S. Yanni, J. Penn
20112 citations
Semantic Scholar
Abstract 5726: Pan-cancer proteogenomics expands the landscape of therapeutic targets
Jonathan T. Lei, Sara R. Savage, Xin-Pei Yi, Bo Wen +7 more
2023Cancer Research1 citations
Semantic Scholar
Abstract 6575: LinkedOmicsKB: A web portal to explore pan-cancer molecular and phenotype associations
Sara R. Savage, Yu-Xing Liao, Yong-Chao Dou, Zhiao Shi +4 more
2023Cancer Research1 citations
Semantic Scholar
Publisher Correction: Comprehensive evaluation of phosphoproteomic-based kinase activity inference
S. Müller-Dott, E. Jaehnig, Khoi Pham Munchic, Wen Jiang +13 more
2025Nature Communications0 citations Open access
Semantic Scholar
Correction to: Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources
Sara R. Savage, Bing Zhang
2024Clinical Proteomics0 citations Open access
Semantic Scholar
Abstract IA-003: Proteogenomic characterizations of pancreatic ductal adenocarcinoma
Liwei Cao, Chen Huang, D. Zhou, Ying-Wei Hu +21 more
2021Big Data0 citations
Semantic Scholar
Abstract 1426: Multiomic analysis identifies CPT1A and fatty acid oxidation as a potential therapeutic target in platinum-refractory high grade serous ovarian cancer
Hong Wang, Dongqing Hugang, Shrabanti Chowdhury, Sara R. Savage +20 more
2021Experimental and Molecular Therapeutics0 citations
Semantic Scholar
Correction: Graph Algorithms for Condensing and Consolidating Gene Set Analysis Results.
Sara R. Savage, Zhiao Shi, Yu-Xing Liao, Bing Zhang
2020Molecular & Cellular Proteomics0 citations Open access
Semantic Scholar
Abstract 5118: Proteogenomics characterization of HPV-negative head and neck squamous cell carcinomas
Chen Huang, Li-Jun Chen, Yi-Ze Li, Sara R. Savage +42 more
2020Clinical research0 citations
Semantic Scholar
Abstract PR02: Proteogenomic approach to identify mechanisms of platinum refractoriness in high-grade serous ovarian cancers
Jacob J. Kennedy, Shrabanti Chowdhury, Sara R. Savage, X. Hou +21 more
2020Oral Presentations - Proffered Abstracts0 citations
Semantic Scholar

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