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E. Jaehnig · SciRah

Researcher profile · Semantic Scholar

E. Jaehnig

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E. Jaehnig — researcher profile on SciRah

h-index: 14
Works: 41
Citations: 5,100

Most-cited papers

WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs
Yu-Xing Liao, Jing Wang, E. Jaehnig, Zhiao Shi +1 more
2019Nucleic Acids Res.2,775 citations Open access
Semantic Scholar
Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy
Karsten Krug, E. Jaehnig, Shankha Satpathy, L. Blumenberg +86 more
2020Cell477 citations Open access
Semantic Scholar
Proteogenomic Characterization of Endometrial Carcinoma
Yong-Chao Dou, Emily A. Kawaler, Daniel Cui Zhou, M. Gritsenko +214 more
2020Cell416 citations Open access
Semantic Scholar
A proteogenomic portrait of lung squamous cell carcinoma
Shankha Satpathy, Karsten Krug, Pierre M. Jean Beltran, Sara R. Savage +70 more
2021Cell343 citations Open access
Semantic Scholar
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma
Chen Huang, Li-Jun Chen, Sara R. Savage, R. V. Eguez +65 more
2021Cancer Cell313 citations Open access
Semantic Scholar
Proteogenomic Data and Resources for Pan-Cancer Analysis
Yi-Ze Li, Yong-Chao Dou, Felipe da Veiga Leprevost, Yifat Geffen +75 more
2023Cancer Cell229 citations Open access
Semantic Scholar
Pan-cancer proteogenomics expands the landscape of therapeutic targets
Sara R. Savage, Xin-Pei Yi, Jonathan T. Lei, Bo Wen +13 more
2024Cell118 citations Open access
Semantic Scholar
Microscaled proteogenomic methods for precision oncology
Shankha Satpathy, E. Jaehnig, Karsten Krug, Beom-Jun Kim +29 more
2019Nature Communications102 citations Open access
Semantic Scholar
Proteogenomic markers of chemotherapy resistance and response in triple negative breast cancer
M. Anurag, E. Jaehnig, Karsten Krug, Jonathan T. Lei +35 more
2022Cancer Discovery93 citations Open access
Semantic Scholar
IRE1α silences dsRNA to prevent taxane-induced pyroptosis in triple-negative breast cancer
Longyong Xu, Fanglue Peng, Qin Luo, Yao Ding +44 more
2024Cell77 citations Open access
Semantic Scholar
Deep learning integrates histopathology and proteogenomics at a pan-cancer level
Joshua M. Wang, Run-Yu Hong, Elizabeth G. Demicco, Jimin Tan +119 more
2023Cell Reports Medicine46 citations Open access
Semantic Scholar
Integrative Analysis of Lung Adenocarcinoma Across Diverse Ethnicities and Exposures
Shankha Satpathy, Natalie M. Clark, Yi-Ju Chen, Noshad Hosseini +90 more
2025Cancer Cell18 citations Open access
Semantic Scholar
Comprehensive evaluation of phosphoproteomic-based kinase activity inference
S. Müller-Dott, E. Jaehnig, Khoi Pham Munchic, Wen Jiang +13 more
2025Nature Communications17 citations Open access
Semantic Scholar
Deciphering the dark cancer phosphoproteome using machine-learned co-regulation of phosphosites
Wen Jiang, E. Jaehnig, Yu-Xing Liao, Zhiao Shi +4 more
2025Nature Communications15 citations Open access
Semantic Scholar
Comprehensive evaluation of phosphoproteomic-based kinase activity inference
S. Müller-Dott, E. Jaehnig, Khoi Pham Munchic, Wen Jiang +13 more
2024bioRxiv14 citations Open access
Semantic Scholar
OmicsEV: a tool for comprehensive quality evaluation of omics data tables
Wen Bo, E. Jaehnig, Bing Zhang
2022Bioinform.12 citations Open access
Semantic Scholar
Proteomic-based stemness score measures oncogenic dedifferentiation and enables the identification of druggable targets
Iga Kołodziejczak-Guglas, Renan L. S. Simões, Emerson de Souza Santos, E. G. Demicco +123 more
2025Cell Genomics10 citations Open access
Semantic Scholar
Kinase inhibitor pulldown assay (KiP) for clinical proteomics
Alexander B. Saltzman, Doug W. Chan, Matthew V. Holt, Jun-Kai Wang +6 more
2022bioRxiv10 citations Open access
Semantic Scholar
Deep Learning Prediction Boosts Phosphoproteomics-Based Discoveries Through Improved Phosphopeptide Identification
Xin-Pei Yi, Bo Wen, Shuyi Ji, Alexander B. Saltzman +4 more
2023Molecular & Cellular Proteomics9 citations Open access
Semantic Scholar
NF1-depleted ER+ breast cancers are differentially sensitive to CDK4/6 inhibitors
Ze-Yi Zheng, Anran Chen, E. Jaehnig, M. Anurag +18 more
2025Science Translational Medicine8 citations Open access
Semantic Scholar
IDPpub: Illuminating the Dark Phosphoproteome Through PubMed Mining
Sara R. Savage, Yao-Yun Zhang, E. Jaehnig, Yu-Xing Liao +4 more
2023Molecular & Cellular Proteomics7 citations Open access
Semantic Scholar
The Breast Cancer Proteome and Precision Oncology.
Jonathan T. Lei, E. Jaehnig, Hannah R. Smith, Matthew V. Holt +6 more
2023Cold Spring Harbor Perspectives in Medicine6 citations Open access
Semantic Scholar
Proteogenomic analysis of the CALGB 40601 (Alliance) HER2+ breast cancer neoadjuvant trial reveals resistance biomarkers
E. Jaehnig, A. Fernández-Martínez, Tanmayi D Vashist, Matthew V. Holt +27 more
2025Cell Reports Medicine5 citations Open access
Semantic Scholar
Deep learning prediction boosts phosphoproteomics-based discoveries through improved phosphopeptide identification
Xin-Pei Yi, Bo Wen, S. Ji, Alexander B. Saltzman +4 more
2023bioRxiv5 citations Open access
Semantic Scholar
A 15-layer multi-omics analysis of gastric cancer ecotypes provides therapeutic insights
Yuefan Wang, Lindsey K. Olsen, Fenglong Jiao, Chen-Wen Wang +108 more
2026Cell Reports Medicine3 citations Open access
Semantic Scholar
Illuminating the Dark Cancer Phosphoproteome Through a Machine-Learned Co-Regulation Map of 26,280 Phosphosites
Wen Jiang, E. Jaehnig, Yu-Xing Liao, Tomer M. Yaron-Barir +3 more
2024bioRxiv2 citations Open access
Semantic Scholar
Kinase Inhibitor Pulldown Assay Identifies a Chemotherapy Response Signature in Triple-negative Breast Cancer Based on Purine-binding Proteins
Jun-Kai Wang, Alexander B. Saltzman, E. Jaehnig, Jonathan T. Lei +8 more
2023Cancer Research Communications1 citations Open access
Semantic Scholar
Abstract 2703: PTMax: An AI-enabled platform integrating literature mining and multi-omics for functional interpretation of phosphorylation in cancer.
Yanling Sun, Sara Savage, John M Elizarraras, E. Jaehnig +1 more
2026Cancer Research0 citations
Semantic Scholar
Abstract PS2-10-06: Proteogenomic profiling of treatment-naïve breast cancer biopsies from patients receiving neoadjuvant chemotherapy
E. Jaehnig, M. Holt, J. Zecha, M. Glover +13 more
2026Clinical Cancer Research0 citations
Semantic Scholar
Publisher Correction: Comprehensive evaluation of phosphoproteomic-based kinase activity inference
S. Müller-Dott, E. Jaehnig, Khoi Pham Munchic, Wen Jiang +13 more
2025Nature Communications0 citations Open access
Semantic Scholar
Abstract GS01-08: CDK4/6 inhibition is a potential vulnerability in NF1-depleted ER+ breast cancer
Ze-Yi Zheng, Anran Chen, E. Jaehnig, M. Anurag +14 more
2024Cancer Research0 citations
Semantic Scholar
Abstract P5-02-36: Proteogenomic profiling of fresh frozen core biopsies from CALGB 40601
E. Jaehnig, A. Fernández-Martínez, Tanmayi D Vashist, Matthew V. Holt +22 more
2023Cancer Research0 citations
Semantic Scholar
Abstract 1460: Co-expression network analysis reveals male breast cancer specific transcriptional module
X. Gou, Jun-Kai Wang, Jonathan T. Lei, E. Jaehnig +1 more
2023Cancer Research0 citations
Semantic Scholar
Abstract 1010: LIG1 deletion predicts chemotherapy resistance, chromosomal instability, and poor prognosis in triple negative breast cancer
M. Anurag, E. Jaehnig, Jonathan T. Lei, Beom-Jun Kim +27 more
2022Cancer Research0 citations
Semantic Scholar
Abstract 2877: LUZP1 is an understudied transcriptional regulator in triple negative breast cancer (TNBC)
Jun-Kai Wang, Doug W. Chan, Beom-Jun Kim, G. Echeverria +3 more
2021Tumor Biology0 citations
Semantic Scholar
Abstract 18: Molecular dissection of chemotherapy response in triple negative breast cancer (TNBC) using microscaled proteogenomics
M. Anurag, E. Jaehnig, Shankha Satpathy, Karsten Krug +18 more
2021Cancer Chemistry0 citations
Semantic Scholar
Abstract 5118: Proteogenomics characterization of HPV-negative head and neck squamous cell carcinomas
Chen Huang, Li-Jun Chen, Yi-Ze Li, Sara R. Savage +42 more
2020Clinical research0 citations
Semantic Scholar
Abstract 5467: Outlier analysis to identify determinants of therapeutic resistance in breast cancer
E. Jaehnig, M. Anurag, Jonathan T. Lei, Bing Zhang
2020Clinical research0 citations
Semantic Scholar
Abstract TS1-2: Proteogenomic Landscape of Prospectively Collected Breast Cancer
M. Gillette, Karsten Krug, Shankha Satpathy, E. Jaehnig +12 more
20200 citations
Semantic Scholar
Abstract 4385: Proteogenomics-driven synthetic lethality discovery to predict targetable protein dependencies induced by somatic deletions
Jonathan T. Lei, E. Jaehnig, Bing Zhang
2020Clinical research0 citations
Semantic Scholar
Abstract GS2-05: Microscaled proteogenomic methods for precision oncology
Shankha Satpathy, E. Jaehnig, Krug Karsten, Beom-Jun Kim +27 more
2020General Session Abstracts0 citations
Semantic Scholar

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