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Ying-Wei Hu · SciRah

Researcher profile · Semantic Scholar

Ying-Wei Hu

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Ying-Wei Hu — researcher profile on SciRah

h-index: 31
Works: 99
Citations: 5,456

Most-cited papers

Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma
M. Gillette, Shankha Satpathy, Song Cao, S. Dhanasekaran +182 more
2020Cell713 citations Open access
Semantic Scholar
Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma
David J. Clark, S. Dhanasekaran, F. Petralia, Jianbo Pan +76 more
2019Cell660 citations Open access
Semantic Scholar
Proteogenomic Characterization of Pancreatic Ductal Adenocarcinoma
L. Cao, Chen Huang, Daniel Cui Zhou, Ying-Wei Hu +52 more
2021Cell501 citations Open access
Semantic Scholar
Proteogenomic Characterization of Endometrial Carcinoma
Yong-Chao Dou, Emily A. Kawaler, Daniel Cui Zhou, M. Gritsenko +214 more
2020Cell416 citations Open access
Semantic Scholar
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry
Philipp Mertins, Lauren C. Tang, Karsten Krug, David J. Clark +26 more
2018Nature Protocols411 citations Open access
Semantic Scholar
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma
Chen Huang, Li-Jun Chen, Sara R. Savage, R. V. Eguez +65 more
2021Cancer Cell313 citations Open access
Semantic Scholar
Proteogenomic Data and Resources for Pan-Cancer Analysis
Yi-Ze Li, Yong-Chao Dou, Felipe da Veiga Leprevost, Yifat Geffen +75 more
2023Cancer Cell229 citations Open access
Semantic Scholar
Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness
Yi-Ze Li, T. Lih, S. Dhanasekaran, R. Mannan +64 more
2022Cancer Cell212 citations Open access
Semantic Scholar
Mapping the O‐glycoproteome using site‐specific extraction of O‐linked glycopeptides (EXoO)
Wei-Ming Yang, Ming-Hui Ao, Ying-Wei Hu, Q. K. Li +1 more
2018Molecular Systems Biology139 citations Open access
Semantic Scholar
Integrated Proteomic and Glycoproteomic Characterization of Human High-Grade Serous Ovarian Carcinoma
Ying-Wei Hu, Jianbo Pan, Punit Shah, Ming-Hui Ao +71 more
2020Cell Reports135 citations Open access
Semantic Scholar
Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis
Rebeca Kawahara, A. Chernykh, K. Alagesan, M. Bern +50 more
2021Nature Methods124 citations Open access
Semantic Scholar
Glycoproteomics-based signatures for tumor subtyping and clinical outcome prediction of high-grade serous ovarian cancer
Jianbo Pan, Ying-Wei Hu, Shisheng Sun, Li-Jun Chen +7 more
2020Nature Communications112 citations Open access
Semantic Scholar
Comparison of Enrichment Methods for Intact N- and O-Linked Glycopeptides Using Strong Anion Exchange and Hydrophilic Interaction Liquid Chromatography
Wei-Ming Yang, Punit Shah, Ying-Wei Hu, S. Eshghi +3 more
2017Analytical Chemistry108 citations Open access
Semantic Scholar
N-GlycositeAtlas: a database resource for mass spectrometry-based human N-linked glycoprotein and glycosylation site mapping
Shisheng Sun, Ying-Wei Hu, Ming-Hui Ao, Punit Shah +6 more
2019Clinical Proteomics88 citations Open access
Semantic Scholar
Reanalysis of Global Proteomic and Phosphoproteomic Data Identified a Large Number of Glycopeptides
Ying-Wei Hu, Punit Shah, David J. Clark, Ming-Hui Ao +1 more
2017bioRxiv76 citations Open access
Semantic Scholar
Label-free quantitative proteomics analysis of antibiotic response in Staphylococcus aureus to oxacillin.
Xiao-Fen Liu, Ying-Wei Hu, Pei-jing Pai, Daijie Chen +1 more
2014Journal of Proteome Research73 citations
Semantic Scholar
Site-Specific Fucosylation Analysis Identifying Glycoproteins Associated with Aggressive Prostate Cancer Cell Lines Using Tandem Affinity Enrichments of Intact Glycopeptides Followed by Mass Spectrometry
Jian‐Liang Zhou, Wei-Ming Yang, Ying-Wei Hu, N. Höti +6 more
2017Analytical Chemistry71 citations Open access
Semantic Scholar
Classification of Tandem Mass Spectra for Identification of N- and O-linked Glycopeptides
Shadi Toghi Eshghi, Wei-Ming Yang, Ying-Wei Hu, Punit Shah +3 more
2016Scientific Reports65 citations Open access
Semantic Scholar
Simultaneous quantification of N- and O-glycans using a solid-phase method
Shuang Yang, Ying-Wei Hu, L. Sokoll, Hui Zhang
2017Nature Protocols62 citations Open access
Semantic Scholar
Proteogenomic insights suggest druggable pathways in endometrial carcinoma
Yong-Chao Dou, L. Katsnelson, M. Gritsenko, Ying-Wei Hu +159 more
2023Cancer Cell50 citations Open access
Semantic Scholar
Proteomic signatures of 16 major types of human cancer reveal universal and cancer-type-specific proteins for the identification of potential therapeutic targets
Yangying Zhou, T. Mamie Lih, Jianbo Pan, N. Höti +10 more
2020Journal of Hematology & Oncology48 citations Open access
Semantic Scholar
Deep learning integrates histopathology and proteogenomics at a pan-cancer level
Joshua M. Wang, Run-Yu Hong, Elizabeth G. Demicco, Jimin Tan +119 more
2023Cell Reports Medicine46 citations Open access
Semantic Scholar
Comprehensive Glycoproteomic Analysis of Chinese Hamster Ovary Cells
Gang-Long Yang, Ying-Wei Hu, Shisheng Sun, Chuanzi Ouyang +4 more
2018bioRxiv46 citations Open access
Semantic Scholar
Overexpression of α (1,6) fucosyltransferase in the development of castration-resistant prostate cancer cells
N. Höti, Shuang Yang, Ying-Wei Hu, Punit Shah +2 more
2018Prostate Cancer and Prostatic Diseases41 citations Open access
Semantic Scholar
Modification of sialic acids on solid-phase: accurate characterization of protein sialylation
Shuang Yang, Lei Zhang, Stefani N. Thomas, Ying-Wei Hu +3 more
2017Analytical Chemistry41 citations Open access
Semantic Scholar
Proteomic response of methicillin-resistant S. aureus to a synergistic antibacterial drug combination: a novel erythromycin derivative and oxacillin
Xiao-Fen Liu, P. Pai, Weipeng Zhang, Ying-Wei Hu +4 more
2016Scientific Reports41 citations Open access
Semantic Scholar
Impact of Increased FUT8 Expression on the Extracellular Vesicle Proteome in Prostate Cancer Cells.
David J. Clark, M. Schnaubelt, N. Höti, Ying-Wei Hu +3 more
2020Journal of Proteome Research40 citations Open access
Semantic Scholar
Developing Workflow for Simultaneous Analyses of Phosphopeptides and Glycopeptides
Kyung-Cho Cho, Li-Jun Chen, Ying-Wei Hu, M. Schnaubelt +1 more
2018ACS Chemical Biology40 citations Open access
Semantic Scholar
Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and α-1B-Glycoprotein
Shisheng Sun, Ying-Wei Hu, L. Jia, S. Eshghi +3 more
2018Analytical Chemistry40 citations Open access
Semantic Scholar
Characterization of core fucosylation via sequential enzymatic treatments of intact glycopeptides and mass spectrometry analysis
Liwei Cao, T. Lih, Ying-Wei Hu, M. Schnaubelt +11 more
2022Nature Communications32 citations Open access
Semantic Scholar
Osteoclast size heterogeneity in rat long bones is associated with differences in adhesive ligand specificity.
Ying-Wei Hu, B. Ek‐Rylander, Eriksson Karlström, M. Wendel +1 more
2008Experimental Cell Research32 citations
Semantic Scholar
Integrated Glycoproteomic Characterization of Clear Cell Renal Cell Carcinoma
T. Lih, Kyung-Cho Cho, M. Schnaubelt, Ying-Wei Hu +1 more
2023Cell Reports31 citations Open access
Semantic Scholar
Mapping human N-linked glycoproteins and glycosylation sites using mass spectrometry
Liuyi Dang, L. Jia, Y. Zhi, Pengfei Li +6 more
2019Trends in Analytical Chemistry (TrAC)31 citations Open access
Semantic Scholar
Evaluation of NCI-7 Cell Line Panel as a Reference Material for Clinical Proteomics
David J. Clark, Ying-Wei Hu, William Bocik, Li-Jun Chen +5 more
2018Journal of Proteome Research27 citations Open access
Semantic Scholar
Data Independent Acquisition-based Mass Spectrometry (DIA-MS) for the quantitative analysis of intact N-linked glycopeptides
M. Dong, T. Lih, Ming-Hui Ao, Ying-Wei Hu +3 more
2021Analytical Chemistry26 citations Open access
Semantic Scholar
Inhibition of the osteoclast V‐ATPase by small interfering RNAs
Ying-Wei Hu, J. Nyman, Pirkko Muhonen, H. Väänänen +1 more
2005FEBS Letters26 citations Open access
Semantic Scholar
A High-Resolution LC-MS-Based Secondary Metabolite Fingerprint Database of Marine Bacteria
Liang Lu, Ji-Jie Wang, Ying Xu, Kai-Ling Wang +9 more
2014Scientific Reports25 citations Open access
Semantic Scholar
Combining Butyrated ManNAc with Glycoengineered CHO Cells Improves EPO Glycan Quality and Production.
Qiong Wang, C. Chung, Wei-Ming Yang, Gang-Long Yang +9 more
2018Biotechnology Journal23 citations
Semantic Scholar
Expanding tandem mass spectral libraries of phosphorylated peptides: advances and applications.
Ying-Wei Hu, Henry H. N. Lam
2013Journal of Proteome Research21 citations
Semantic Scholar
Simple Tip-Based Sample Processing Method for Urinary Proteomic Analysis
David J. Clark, Ying-Wei Hu, M. Schnaubelt, Yingzheng Fu +5 more
2019Analytical Chemistry20 citations Open access
Semantic Scholar
Deciphering the Roles of N–Glycans on Collagen–Platelet Interactions
C. Toonstra, Ying-Wei Hu, Hui Zhang
2018bioRxiv20 citations Open access
Semantic Scholar
A semi‐empirical approach for predicting unobserved peptide MS/MS spectra from spectral libraries
Ying-Wei Hu, Yunzi Li, Henry H. N. Lam
2011Proteomics20 citations
Semantic Scholar
Proteomics analyses of prostate cancer cells reveals cellular pathways associated with androgen resistance
N. Höti, Punit Shah, Ying-Wei Hu, Shuang Yang +1 more
2017Proteomics19 citations Open access
Semantic Scholar
MS-PyCloud: A cloud computing-based pipeline for proteomic and glycoproteomic data analysis
Ying-Wei Hu, M. Schnaubelt, Li Chen, Bai Zhang +4 more
2024Analytical Chemistry18 citations
Semantic Scholar
Improving glycoproteomic analysis workflow by systematic evaluation of glycopeptide enrichment, quantification, mass spectrometry approach, and data analysis strategies
Zhen-Yu Sun, T. Lih, Jongmin Woo, Li-Yuan Jiao +4 more
2024Analytical Chemistry17 citations
Semantic Scholar
An integrated proteomic and glycoproteomic approach uncovers differences in glycosylation occupancy from benign and malignant epithelial ovarian tumors
Q. K. Li, Punit Shah, Yuan Tian, Ying-Wei Hu +3 more
2017Clinical Proteomics15 citations Open access
Semantic Scholar
Proteomic characterization of primary and metastatic prostate cancer reveals reduced proteinase activity in aggressive tumors
Q. K. Li, J. Chen, Ying-Wei Hu, N. Höti +10 more
2021Scientific Reports14 citations Open access
Semantic Scholar
Direct glycan structure determination of intact N-linked glycopeptides by low-energy collision-induced dissociation tandem mass spectrometry and predicted spectral library searching.
Pei-jing Pai, Ying-Wei Hu, Henry H. N. Lam
2016Analytica Chimica Acta12 citations
Semantic Scholar
Characterization of In Vivo Protein Complexes via Chemical Cross-Linking and Mass Spectrometry
Yuefan Wang, Ying-Wei Hu, N. Höti, Lan Huang +1 more
2021Analytical Chemistry11 citations Open access
Semantic Scholar
Proteomic-based stemness score measures oncogenic dedifferentiation and enables the identification of druggable targets
Iga Kołodziejczak-Guglas, Renan L. S. Simões, Emerson de Souza Santos, E. G. Demicco +123 more
2025Cell Genomics10 citations Open access
Semantic Scholar

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