Skip to content

Home Search Authors Pakistan News Saved

SciRah

SciRah does not host or store research papers. Results come live from free, official scholarly APIs, and every paper links back to its original source.

Data sources

OpenAlex
Semantic Scholar
Crossref
CORE
arXiv
PubMed

Privacy policy Terms of service

B. Williams · SciRah

Researcher profile · Semantic Scholar

B. Williams

Share profile

B. Williams — researcher profile on SciRah

h-index: 35
Works: 56
Citations: 29K

Most-cited papers

Mapping and quantifying mammalian transcriptomes by RNA-Seq
A. Mortazavi, B. Williams, K. Mccue, Lorian Schaeffer +1 more
2008Nature Methods14K citations Open access
Semantic Scholar
Landscape of transcription in human cells
S. Djebali, Carrie A. Davis, A. Merkel, A. Dobin +81 more
2012Nature4,999 citations Open access
Semantic Scholar
Expanded encyclopaedias of DNA elements in the human and mouse genomes
Jill E. Moore, M. Purcaro, Henry E. Pratt, C. Epstein +59 more
2020Nature2,079 citations Open access
Semantic Scholar
A Comparative Encyclopedia of DNA Elements in the Mouse Genome
Feng Yue, Yong Cheng, A. Breschi, J. Vierstra +133 more
2014Nature1,636 citations Open access
Semantic Scholar
Dynamic DNA methylation across diverse human cell lines and tissues
K. Varley, J. Gertz, K. Bowling, S. Parker +9 more
2013Genome Research709 citations Open access
Semantic Scholar
An encyclopedia of mouse DNA elements (Mouse ENCODE)
J. Stamatoyannopoulos, Michael Snyder, R. Hardison, B. Ren +82 more
2012Genome Biology480 citations Open access
Semantic Scholar
An Integrated Physical and Genetic Map of the Rice Genome
Ming-Sheng Chen, Gernot G. Presting, W. B. Barbazuk, J. Goicoechea +35 more
2002The Plant Cell Online472 citations Open access
Semantic Scholar
From single-cell to cell-pool transcriptomes: Stochasticity in gene expression and RNA splicing
G. Marinov, B. Williams, K. Mccue, G. Schroth +3 more
2014Genome Research467 citations Open access
Semantic Scholar
Pax-3 expression in segmental mesoderm marks early stages in myogenic cell specification.
B. Williams, C. Ordahl
1994Development408 citations
Semantic Scholar
Dynamic transformations of genome-wide epigenetic marking and transcriptional control establish T cell identity
Jing-Li Zhang, A. Mortazavi, B. Williams, B. Wold +1 more
2012Cell351 citations Open access
Semantic Scholar
Characterization of the human ESC transcriptome by hybrid sequencing
K. Au, V. Sebastiano, Pegah T. Afshar, Jens Durruthy Durruthy +7 more
2013Proceedings of the National Academy of Sciences of the United States of America330 citations Open access
Semantic Scholar
An atlas of dynamic chromatin landscapes in mouse fetal development
David U. Gorkin, I. Barozzi, Yuan Zhao, Yan-Xiao Zhang +39 more
2020Nature318 citations Open access
Semantic Scholar
Microglia in the Cerebral Cortex in Autism
Nicole A. Tetreault, Atiya Y. Hakeem, Sue Jiang, B. Williams +3 more
2012Journal of Autism and Developmental Disorders280 citations
Semantic Scholar
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese, M. Diekhans +83 more
2024Nature Methods207 citations Open access
Semantic Scholar
The Developmental Transcriptome of the Mosquito Aedes aegypti, an Invasive Species and Major Arbovirus Vector
O. Akbari, I. Antoshechkin, Henry Amrhein, B. Williams +3 more
2013G3: Genes, Genomes, Genetics195 citations Open access
Semantic Scholar
A technology-agnostic long-read analysis pipeline for transcriptome discovery and quantification
D. Wyman, Gabriela Balderrama-Gutierrez, Fairlie Reese, Shan Jiang +12 more
2019bioRxiv173 citations Open access
Semantic Scholar
Effects of sequence variation on differential allelic transcription factor occupancy and gene expression
Timothy E. Reddy, J. Gertz, Florencia Pauli, Katerina S. Kucera +10 more
2012Genome Research170 citations Open access
Semantic Scholar
Single cell transcriptome analysis reveals dynamic changes in lncRNA expression during reprogramming
Daniel H. Kim, G. Marinov, S. Pepke, Zakary S. Singer +5 more
2015Cell Stem Cell168 citations Open access
Semantic Scholar
The changing mouse embryo transcriptome at whole tissue and single-cell resolution
Peng He, B. Williams, Diane Trout, G. Marinov +12 more
2020Nature164 citations Open access
Semantic Scholar
RNA editing in the human ENCODE RNA-seq data
Eddie Park, B. Williams, B. Wold, A. Mortazavi
2012Genome Research163 citations Open access
Semantic Scholar
Spatiotemporal DNA methylome dynamics of the developing mouse fetus
Yu-Peng He, M. Hariharan, David U. Gorkin, D. Dickel +16 more
2020Nature129 citations Open access
Semantic Scholar
A human embryonic limb cell atlas resolved in space and time
Bao Zhang, Peng He, J. E. Lawrence, Shuai-Yu Wang +29 more
2023bioRxiv126 citations Open access
Semantic Scholar
Scaffolding a Caenorhabditis nematode genome with RNA-seq.
A. Mortazavi, E. Schwarz, B. Williams, Lorian Schaeffer +3 more
2010Genome Research110 citations Open access
Semantic Scholar
Mutation of Arabidopsis SPLICEOSOMAL TIMEKEEPER LOCUS1 Causes Circadian Clock Defects[W]
M. Jones, B. Williams, Jim McNicol, C. Simpson +2 more
2012The Plant Cell109 citations Open access
Semantic Scholar
Significance and statistical errors in the analysis of DNA microarray data
James P. Brody, B. Williams, B. Wold, S. Quake
2002Proceedings of the National Academy of Sciences of the United States of America98 citations Open access
Semantic Scholar
Single-cell analysis reveals regulatory gene expression dynamics leading to lineage commitment in early T cell development
Wen Zhou, M. Yui, B. Williams, Ji-Na Yun +3 more
2019Cell Systems88 citations Open access
Semantic Scholar
Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks
A. Dillman, M. Macchietto, C. F. Porter, Alicia K. Rogers +11 more
2015Genome Biology85 citations Open access
Semantic Scholar
The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models
J. Rozowsky, Jia-Hao Gao, Beatrice Borsari, Yucheng T. Yang +99 more
2022bioRxiv76 citations Open access
Semantic Scholar
Pioneering, chromatin remodeling, and epigenetic constraint in early T-cell gene regulation by SPI1 (PU.1)
Jonas Ungerbäck, H. Hosokawa, Xun Wang, Tobias Strid +3 more
2018bioRxiv69 citations Open access
Semantic Scholar
Determination and morphogenesis in myogenic progenitor cells: an experimental embryological approach.
C. Ordahl, B. Williams, W. Denetclaw
2000Current Topics in Developmental Biology68 citations
Semantic Scholar
The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity
Fairlie Reese, B. Williams, Gabriela Balderrama-Gutierrez, D. Wyman +41 more
2023bioRxiv62 citations Open access
Semantic Scholar
Enhanced signals and fast nucleic acid hybridization by microfluidic chaotic mixing.
Jian Liu, B. Williams, Richele M Gwirtz, B. Wold +1 more
2006Angewandte Chemie60 citations Open access
Semantic Scholar
Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips
Jeremy Drolet, V. Tolstikov, B. Williams, B. Greenwood +5 more
2017Metabolites52 citations Open access
Semantic Scholar
Genomic DNA as a cohybridization standard for mammalian microarray measurements.
B. Williams, Richele M Gwirtz, B. Wold
2004Nucleic Acids Research35 citations Open access
Semantic Scholar
Reconstructing a metazoan genetic pathway with transcriptome-wide epistasis measurements
David Angeles-Albores, Carmie Puckett Robinson, B. Williams, B. Wold +1 more
2017Proceedings of the National Academy of Sciences of the United States of America31 citations Open access
Semantic Scholar
Dynamics of microRNA expression during mouse prenatal development
Sorena Rahmanian, R. Murad, A. Breschi, Weihua Zeng +17 more
2018Genome Research28 citations Open access
Semantic Scholar
Transcriptional regulation by nicotine in dopaminergic neurons
Beverley M Henley, B. Williams, Rahul Srinivasan, B. Cohen +13 more
201324 citations
Semantic Scholar
Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes
Jill E. Moore, M. Purcaro, Henry E. Pratt, C. Epstein +59 more
2022Nature23 citations Open access
Semantic Scholar
Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus
Yu-Peng He, M. Hariharan, David U. Gorkin, D. Dickel +14 more
2017bioRxiv22 citations Open access
Semantic Scholar
Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development
David U. Gorkin, I. Barozzi, Yuan Zhao, Yan-Xiao Zhang +39 more
2020Nature19 citations Open access
Semantic Scholar
Transcription factor redundancy and tissue-specific regulation: Evidence from functional and physical network connectivity
Steven G Kuntz, B. Williams, P. Sternberg, B. Wold
2012Genome Research19 citations Open access
Semantic Scholar
Self-assembling peptide assemblies bound to ZnS nanoparticles and their interactions with mammalian cells.
Nako Nakatsuka, S. N. Barnaby, A. Tsiola, Karl R. Fath +2 more
2013Colloids and Surfaces B: Biointerfaces14 citations
Semantic Scholar
Isolation by genetic complementation of two differentially expressed genes for β-isopropylmalate dehydrogenase from Aspergillus niger
B. Williams, S. Sillaots, Adrian Tsang, R. Storms
1996Current Genetics12 citations
Semantic Scholar
Genomic DNA as a general cohybridization standard for ratiometric microarrays.
B. Williams, Richele M Gwirtz, B. Wold
2006Methods in Enzymology7 citations
Semantic Scholar
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
Francisco J. Pardo-Palacios, Fairlie Reese, Sílvia Carbonell-Sala, M. Diekhans +33 more
20215 citations Open access
Semantic Scholar
A ratiometric-based measure of gene co-expression
Anna C. T. Abelin, G. Marinov, B. Williams, K. Mccue +1 more
2014BMC Bioinformatics4 citations Open access
Semantic Scholar
Genetic Analysis of a Metazoan Pathway using Transcriptomic Phenotypes
David Angeles-Albores, Carmie Puckett Robinson, B. Williams, B. Wold +1 more
20171 citations
Semantic Scholar
expression and RNA splicing From single-cell to cell-pool transcriptomes : Stochasticity in gene Material Supplemental
G. Marinov, B. Williams, K. Mccue, G. Schroth +3 more
20141 citations
Semantic Scholar
Disulfide-mediated stabilization of DJ-1, a protein implicated in Parkinson disease
B. Williams
20131 citations
Semantic Scholar
Methods for “ The effects of genome sequence on differential allelic transcription factor occupancy and gene expression ”
Timothy E. Reddy, J. Gertz, Florencia Pauli, Katerina S. Kucera +10 more
20121 citations
Semantic Scholar

Frequent co-authors

Invite them to SciRah by sharing their profile.

B. Wold×34
Invite
B. Wold — researcher profile on SciRah
A. Mortazavi×16
Invite
A. Mortazavi — researcher profile on SciRah
Diane Trout×11
Invite
Diane Trout — researcher profile on SciRah
G. Marinov×10
Invite
G. Marinov — researcher profile on SciRah

×10

Invite

R. Guigó — researcher profile on SciRah

Invite

B. Ren — researcher profile on SciRah

Invite

R. Myers — researcher profile on SciRah

Henry Amrhein×8

Invite

Henry Amrhein — researcher profile on SciRah

Carrie A. Davis×7

Invite

Carrie A. Davis — researcher profile on SciRah

Invite

A. Dobin — researcher profile on SciRah

Invite

T. Gingeras — researcher profile on SciRah

David U. Gorkin×7

Invite

David U. Gorkin — researcher profile on SciRah