Skip to content

Home Search Authors Pakistan News Saved

SciRah

SciRah does not host or store research papers. Results come live from free, official scholarly APIs, and every paper links back to its original source.

Data sources

OpenAlex
Semantic Scholar
Crossref
CORE
arXiv
PubMed

Privacy policy Terms of service

D. Keskin · SciRah

Researcher profile · Semantic Scholar

D. Keskin

Share profile

D. Keskin — researcher profile on SciRah

h-index: 41
Works: 150
Citations: 13K

Most-cited papers

An Immunogenic Personal Neoantigen Vaccine for Melanoma Patients
P. Ott, Zhuting Hu, D. Keskin, S. Shukla +36 more
2017Nature2,702 citations Open access
Semantic Scholar
Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial
D. Keskin, Annabelle J Anandappa, Jing Sun, I. Tirosh +47 more
2018Nature1,268 citations Open access
Semantic Scholar
Mass Spectrometry Profiling of HLA-Associated Peptidomes in Mono-allelic Cells Enables More Accurate Epitope Prediction
Jennifer G. Abelin, D. Keskin, Siranush Sarkizova, Christina R. Hartigan +11 more
2017Immunity614 citations Open access
Semantic Scholar
Personal Neoantigen Vaccines Induce Persistent Memory T Cell Responses and Epitope Spreading in Patients with Melanoma
Zhuting Hu, Donna E. Leet, R. Allesøe, G. Oliveira +37 more
2021Nature Medicine493 citations Open access
Semantic Scholar
Phenotype, specificity and avidity of antitumour CD8+ T cells in melanoma
G. Oliveira, Kari Stromhaug, Susan Klaeger, T. Kula +22 more
2021Nature492 citations Open access
Semantic Scholar
A large peptidome dataset improves HLA class I epitope prediction across most of the human population
Siranush Sarkizova, Susan Klaeger, Phuong M. Le, Letitia W. Li +21 more
2019Nature Biotechnology468 citations Open access
Semantic Scholar
Progressive immune dysfunction with advancing disease stage in renal cell carcinoma
D. Braun, Kelly Street, K. Burke, D. Cookmeyer +31 more
2021Cancer Cell436 citations Open access
Semantic Scholar
Systematic identification of personal tumor-specific neoantigens in chronic lymphocytic leukemia.
M. Rajasagi, S. Shukla, E. Fritsch, D. Keskin +15 more
2014Blood322 citations Open access
Semantic Scholar
Mitochondrial reprogramming underlies resistance to BCL-2 inhibition in lymphoid Malignancies
R. Guièze, Vivian M. Liu, D. Rosebrock, Alexis A. Jourdain +37 more
2019Cancer Cell321 citations Open access
Semantic Scholar
Unannotated proteins expand the MHC-I-restricted immunopeptidome in cancer
Tamara Ouspenskaia, Travis Law, K. Clauser, Susan Klaeger +25 more
2021Nature Biotechnology251 citations Open access
Semantic Scholar
Force-dependent transition in the T-cell receptor β-subunit allosterically regulates peptide discrimination and pMHC bond lifetime
D. Das, Yinnian Feng, R. Mallis, Xiao-Long Li +7 more
2015Proceedings of the National Academy of Sciences of the United States of America247 citations Open access
Semantic Scholar
Landscape of helper and regulatory antitumor CD4+ T cells in melanoma
G. Oliveira, Kari Stromhaug, N. Cieri, J. B. Iorgulescu +23 more
2022Nature176 citations Open access
Semantic Scholar
Cancer-germline antigen expression discriminates clinical outcome to CTLA-4 blockade
S. Shukla, Pavan Bachireddy, B. Schilling, Christina Galonska +28 more
2018Cell153 citations Open access
Semantic Scholar
Profiling SARS-CoV-2 HLA-I peptidome reveals T cell epitopes from out-of-frame ORFs
S. Weingarten-Gabbay, Susan Klaeger, Siranush Sarkizova, L. Pearlman +54 more
2021Cell129 citations Open access
Semantic Scholar
Acquired mechanisms of immune escape in cancer following immunotherapy
J. B. Iorgulescu, D. Braun, G. Oliveira, D. Keskin +1 more
2018Genome Medicine67 citations Open access
Semantic Scholar
Corrigendum: An immunogenic personal neoantigen vaccine for patients with melanoma
P. Ott, Zhuting Hu, D. Keskin, S. Shukla +36 more
2018Nature65 citations Open access
Semantic Scholar
A cloning and expression system to probe T-cell receptor specificity and assess functional avidity to neoantigens.
Zhuting Hu, Annabelle J Anandappa, Jing Sun, Jintaek Kim +22 more
2018Blood60 citations Open access
Semantic Scholar
Physical detection of influenza A epitopes identifies a stealth subset on human lung epithelium evading natural CD8 immunity
D. Keskin, B. Reinhold, Guanglan Zhang, A. Ivanov +2 more
2015Proceedings of the National Academy of Sciences of the United States of America54 citations Open access
Semantic Scholar
Optimized Liquid and Gas Phase Fractionation Increases HLA-Peptidome Coverage for Primary Cell and Tissue Samples
Susan Klaeger, Annie Apffel, K. Clauser, Siranush Sarkizova +13 more
2021Molecular & Cellular Proteomics49 citations Open access
Semantic Scholar
ALK peptide vaccination restores the immunogenicity of ALK-rearranged non-small cell lung cancer
Ines Mota, E. Patrucco, C. Mastini, N. Mahadevan +27 more
2023Nature Cancer40 citations Open access
Semantic Scholar
Ultra-high resolution HLA genotyping and allele discovery by highly multiplexed cDNA amplicon pyrosequencing
S. Lank, Brittney A Golbach, Hannah M. Creager, R. Wiseman +4 more
2012BMC Genomics40 citations Open access
Semantic Scholar
TANTIGEN 2.0: a knowledge base of tumor T cell antigens and epitopes
Guanglan Zhang, Lou T. Chitkushev, L. R. Olsen, D. Keskin +1 more
2021BMC Bioinformatics39 citations Open access
Semantic Scholar
Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer
Tamara Ouspenskaia, Travis Law, K. Clauser, Susan Klaeger +23 more
2020bioRxiv39 citations Open access
Semantic Scholar
RNase H-dependent PCR-enabled T Cell Receptor sequencing (rhTCRseq) for Highly Specific and Efficient Targeted Sequencing of T Cell Receptor mRNA for Single-Cell and Repertoire Analysis
Shu-Qiang Li, Jing Sun, R. Allesøe, Krishnalekha Datta +9 more
2019Nature Protocols36 citations Open access
Semantic Scholar
Targeting DEC-205−DCIR2+ dendritic cells promotes immunological tolerance in proteolipid protein-induced experimental autoimmune encephalomyelitis
I. Tabansky, D. Keskin, Deepika Watts, C. Petzold +10 more
2018Molecular Medicine36 citations Open access
Semantic Scholar
TCR-pMHC encounter differentially regulates transcriptomes of- tissue-resident CD8 T cells
A. Yoshizawa, Kevin Bi, D. Keskin, G. Zhang +2 more
2017European Journal of Immunology36 citations Open access
Semantic Scholar
Reversal of viral and epigenetic HLA class I repression in Merkel cell carcinoma
Patrick C. Lee, Susan Klaeger, Phuong M. Le, Keegan D. Korthauer +42 more
2022Journal of Clinical Investigation32 citations Open access
Semantic Scholar
Improved T cell immunity following neoadjuvant chemotherapy in ovarian cancer
Min Liu, N. Tayob, L. Penter, Maclean C. Sellars +20 more
2022Clinical Cancer Research30 citations Open access
Semantic Scholar
Lynch syndrome cancer vaccines: A roadmap for the development of precision immunoprevention strategies
S. Sei, A. Ahadova, D. Keskin, Lena Bohaumilitzky +4 more
2023Frontiers in Oncology29 citations Open access
Semantic Scholar
Automated Flow Synthesis of Tumor Neoantigen Peptides for Personalized Immunotherapy
Nicholas L. Truex, Rebecca L. Holden, Bin-you Wang, Pu‐Guang Chen +10 more
2020Scientific Reports29 citations Open access
Semantic Scholar
Heteroclitic XBP1 peptides evoke tumor-specific memory cytotoxic T lymphocytes against breast cancer, colon cancer, and pancreatic cancer cells
J. Bae, M. Samur, Aditya Munshi, T. Hideshima +6 more
2014Oncoimmunology28 citations Open access
Semantic Scholar
Advancing drug delivery systems for the treatment of multiple sclerosis
I. Tabansky, Mark D. Messina, Catherine Bangeranye, J. Goldstein +9 more
2015Immunologic research27 citations
Semantic Scholar
The BRD4–NUT Fusion Alone Drives Malignant Transformation of NUT Carcinoma
R. T. Durall, Julianna Huang, Luke Wojenski, Ye-Ying Huang +15 more
2023Cancer Research26 citations Open access
Semantic Scholar
Identification and characterization of HLA-A24-specific XBP1, CD138 (Syndecan-1) and CS1 (SLAMF7) peptides inducing antigens-specific memory cytotoxic T lymphocytes targeting multiple myeloma
J. Bae, T. Hideshima, G.-L. Zhang, J. Zhou +3 more
2018Leukemia26 citations Open access
Semantic Scholar
Constitutively Oxidized CXXC Motifs within the CD3 Heterodimeric Ectodomains of the T Cell Receptor Complex Enforce the Conformation of Juxtaposed Segments*
K. Brazin, R. Mallis, Chen Li, D. Keskin +6 more
2014Journal of Biological Chemistry25 citations Open access
Semantic Scholar
YAP1 and WWTR1 expression inversely correlates with neuroendocrine markers in Merkel cell carcinoma
Thomas C. Frost, A. Gartin, Mofei Liu, Jing-Wei Cheng +6 more
2023Journal of Clinical Investigation23 citations Open access
Semantic Scholar
Robust anti-tumor T cell response with efficient intratumoral infiltration by nanodisc cancer immunotherapy
Rui Kuai, Priti B. Singh, Xiao-Qi Sun, Cheng Xu +10 more
2020Advances in Therapy23 citations Open access
Semantic Scholar
Distinct evolutionary paths in chronic lymphocytic leukemia during resistance to the graft-versus-leukemia effect
Pavan Bachireddy, Christina S. Ennis, Vinhkhang N. Nguyen, S. Gohil +23 more
2020Science Translational Medicine22 citations Open access
Semantic Scholar
HPVdb: a data mining system for knowledge discovery in human papillomavirus with applications in T cell immunology and vaccinology
Guanglan Zhang, A. Riemer, D. Keskin, Lou T. Chitkushev +2 more
2013ACM International Conference on Bioinformatics, Computational Biology and Biomedicine22 citations Open access
Semantic Scholar
SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs
S. Weingarten-Gabbay, Susan Klaeger, Siranush Sarkizova, L. Pearlman +17 more
2020bioRxiv20 citations Open access
Semantic Scholar
Classification of Five Cell Types from PBMC Samples using Single Cell Transcriptomics and Artificial Neural Networks
R. A. Shaikh, Jia-Hui Zhong, M. Lyu, Sen Lin +4 more
2019IEEE International Conference on Bioinformatics and Biomedicine11 citations
Semantic Scholar
Lenalidomide Polarizes Th1-specific Anti-tumor Immune Response and Expands XBP1 Antigen-Specific Central Memory CD3+CD8+ T cells against Various Solid Tumors
J. Bae, D. Keskin, K. Cowens, Ann-Hwee Lee +3 more
2015Journal of Leukemia11 citations Open access
Semantic Scholar
Rare variants and HLA haplotypes associated in patients with neuromyelitis optica spectrum disorders
I. Tabansky, Akemi J. Tanaka, Jiayao Wang, Guanglan Zhang +22 more
2022Frontiers in Immunology10 citations Open access
Semantic Scholar
Forward Vaccinology: CTL Targeting Based upon Physical Detection of HLA-Bound Peptides
E. Reinherz, D. Keskin, B. Reinhold
2014Frontiers in Immunology10 citations Open access
Semantic Scholar
Integrated Immunopeptidomic and Proteomic Analysis of COVID-19 lung biopsies
Shanye Yin, Susan Klaeger, Vipheaviny A. Chea, Isabel Carulli +12 more
2023Frontiers in Immunology8 citations Open access
Semantic Scholar
Steroid-Peptide Immunoconjugates for Attenuating T Cell Responses in an Experimental Autoimmune Encephalomyelitis Murine Model of Multiple Sclerosis.
R. Sands, I. Tabansky, C. Verbeke, D. Keskin +3 more
2020Bioconjugate chemistry7 citations
Semantic Scholar
Single-cell mRNA Profiles in PBMC
Lu-Ning Yang, Yi-Han Zhang, N. Mitic, D. Keskin +3 more
2020IEEE International Conference on Bioinformatics and Biomedicine7 citations
Semantic Scholar
Effect of dexamethasone in glioblastoma (GBM) patients on systemic and intratumoral T-cell responses induced by personalized neoantigen-targeting vaccine.
D. Reardon, D. Neuberg, D. Keskin, I. Tirosh +16 more
20186 citations
Semantic Scholar
Human Leukocyte Antigen Typing Using a Knowledge Base Coupled with a High-Throughput Oligonucleotide Probe Array Analysis
Guanglan Zhang, D. Keskin, Hsin-Nan Lin, Hong-Huang Lin +5 more
2014Frontiers in Immunology6 citations Open access
Semantic Scholar
Fine tuning of CpG spatial distribution with DNA origami for improved therapeutic cancer vaccination
Yang C. Zeng, Olivia J. Young, Christopher M. Wintersinger, Frances M. Anastassacos +19 more
2023bioRxiv5 citations Open access
Semantic Scholar

Frequent co-authors

Invite them to SciRah by sharing their profile.

C. Wu×25
Invite
C. Wu — researcher profile on SciRah
N. Hacohen×18
Invite
N. Hacohen — researcher profile on SciRah
D. Neuberg×16
Invite
D. Neuberg — researcher profile on SciRah
S. Shukla×14
Invite
S. Shukla — researcher profile on SciRah

×14

Invite

Wan-Di Zhang — researcher profile on SciRah

Shu-Qiang Li×12

Invite

Shu-Qiang Li — researcher profile on SciRah

Susan Klaeger×11

Invite

Susan Klaeger — researcher profile on SciRah

Invite

P. Ott — researcher profile on SciRah

G. Oliveira×10

Invite

G. Oliveira — researcher profile on SciRah

Invite

K. Livak — researcher profile on SciRah

Invite

E. Fritsch — researcher profile on SciRah

Siranush Sarkizova×9

Invite

Siranush Sarkizova — researcher profile on SciRah