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M. Barker · SciRah

Researcher profile · Semantic Scholar

M. Barker

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M. Barker — researcher profile on SciRah

h-index: 47
Works: 118
Citations: 13K

Most-cited papers

A community‐derived classification for extant lycophytes and ferns
E. Schuettpelz, Harald Schneider, Alan R. Smith, P. Hovenkamp +90 more
20161,498 citations Open access
Semantic Scholar
One thousand plant transcriptomes and the phylogenomics of green plants
J. Leebens-Mack, M. Barker, E. Carpenter, M. Deyholos +190 more
2019Nature1,374 citations Open access
Semantic Scholar
Phylotranscriptomic analysis of the origin and early diversification of land plants
N. Wickett, S. Mirarab, Nam-phuong Nguyen, T. Warnow +38 more
2014Proceedings of the National Academy of Sciences of the United States of America1,148 citations Open access
Semantic Scholar
The compact Selaginella genome identifies changes in gene content associated with the evolution of vascular plants
J. Banks, T. Nishiyama, M. Hasebe, J. Bowman +99 more
2011Science794 citations Open access
Semantic Scholar
The butterfly plant arms-race escalated by gene and genome duplications
P. Edger, Hanna M. Heidel-Fischer, M. Bekaert, J. Rota +20 more
2015Proceedings of the National Academy of Sciences of the United States of America472 citations Open access
Semantic Scholar
Fern genomes elucidate land plant evolution and cyanobacterial symbioses
Fay-Wei Li, P. Brouwer, L. Carretero-Paulet, Shi-Feng Cheng +38 more
2018Nature Plants429 citations Open access
Semantic Scholar
On the relative abundance of autopolyploids and allopolyploids.
M. Barker, N. Arrigo, A. Baniaga, Zheng Li +1 more
2016New Phytologist364 citations Open access
Semantic Scholar
Impact of whole-genome duplication events on diversification rates in angiosperms.
J. Landis, D. Soltis, Zheng Li, Hannah E. Marx +3 more
2018American-Eurasian journal of botany298 citations Open access
Semantic Scholar
Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts
Fay-Wei Li, T. Nishiyama, Manuel Waller, Eftychios Frangedakis +30 more
2020Nature Plants288 citations Open access
Semantic Scholar
Early genome duplications in conifers and other seed plants
Zheng Li, A. Baniaga, Emily B. Sessa, M. Scascitelli +3 more
2015Science Advances259 citations Open access
Semantic Scholar
Rarely successful polyploids and their legacy in plant genomes.
N. Arrigo, M. Barker
2012Current opinion in plant biology238 citations
Semantic Scholar
Probabilistic models of chromosome number evolution and the inference of polyploidy.
I. Mayrose, M. Barker, S. Otto
2010Systematic Biology219 citations
Semantic Scholar
Recently Formed Polyploid Plants Diversify at Lower Rates
I. Mayrose, Shing H. Zhan, C. Rothfels, Karen Magnuson-Ford +3 more
2011Science170 citations
Semantic Scholar
Dynamic genome evolution in a model fern
D. Marchant, Guang Chen, S. Cai, Fei Chen +46 more
2022Nature Plants154 citations Open access
Semantic Scholar
Analysis of the Coptis chinensis genome reveals the diversification of protoberberine-type alkaloids
Yifei Liu, Bo Wang, Shao-Hua Shu, Zheng Li +22 more
2021Nature Communications153 citations Open access
Semantic Scholar
Multiple large-scale gene and genome duplications during the evolution of hexapods
Zheng Li, G. Tiley, Sally R. Galuska, Chris R. Reardon +3 more
2018Proceedings of the National Academy of Sciences of the United States of America151 citations Open access
Semantic Scholar
Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP)
E. Carpenter, Naim Matasci, S. Ayyampalayam, Shuang-Xiu Wu +14 more
2019GigaScience150 citations Open access
Semantic Scholar
Patterns and Processes of Diploidization in Land Plants.
Zheng Li, Michael T. W. McKibben, G. Finch, Paul D. Blischak +2 more
2021Annual Review of Plant Biology143 citations
Semantic Scholar
De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum
J. Der, M. Barker, N. Wickett, C. dePamphilis +1 more
2011BMC Genomics126 citations Open access
Semantic Scholar
Polyploid plants have faster rates of multivariate niche differentiation than their diploid relatives.
A. Baniaga, Hannah E. Marx, N. Arrigo, M. Barker
2019Ecology Letters122 citations Open access
Semantic Scholar
Most Compositae (Asteraceae) are descendants of a paleohexaploid and all share a paleotetraploid ancestor with the Calyceraceae
M. Barker, Zheng Li, Thomas I. Kidder, Chris R. Reardon +4 more
2016bioRxiv101 citations Open access
Semantic Scholar
Ancient genome duplications during the evolution of kiwifruit (Actinidia) and related Ericales.
Tao Shi, Hong-Wen Huang, M. Barker
2010Annals of Botany98 citations Open access
Semantic Scholar
Unfurling Fern Biology in the Genomics Age
M. Barker, P. Wolf
201098 citations Open access
Semantic Scholar
Underwater CAM photosynthesis elucidated by Isoetes genome
David Wickell, Li‐Yaung Kuo, Hsiao-Pei Yang, Amra Dhabalia Ashok +10 more
2021Nature Communications93 citations Open access
Semantic Scholar
Transcriptome and organellar sequencing highlights the complex origin and diversification of allotetraploid Brassica napus
Hong An, Xinshuai Qi, M. L. Gaynor, Yue Hao +9 more
2019Nature Communications92 citations Open access
Semantic Scholar
Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention
T. Mandáková, Zheng Li, M. Barker, M. Lysak
2017bioRxiv91 citations Open access
Semantic Scholar
Genomics of Compositae weeds: EST libraries, microarrays, and evidence of introgression.
Z. Lai, N. Kane, A. Kozik, Kathryn A. Hodgins +17 more
2012American-Eurasian journal of botany87 citations
Semantic Scholar
Methods for studying polyploid diversification and the dead end hypothesis: a reply to Soltis et al. (2014).
I. Mayrose, Shing H. Zhan, C. Rothfels, N. Arrigo +3 more
2015New Phytologist86 citations
Semantic Scholar
Spreading Winge and flying high: The evolutionary importance of polyploidy after a century of study.
M. Barker, B. Husband, J. Pires
2016American-Eurasian journal of botany82 citations
Semantic Scholar
Assessing the Performance of Ks Plots for Detecting Ancient Whole Genome Duplications
G. Tiley, M. Barker, J. Burleigh
2018Genome Biology and Evolution78 citations Open access
Semantic Scholar
Genomic inferences of domestication events are corroborated by written records in Brassica rapa
Xinshuai Qi, Hong An, Aaron P. Ragsdale, T. E. Hall +3 more
2017bioRxiv70 citations Open access
Semantic Scholar
The Compositae Tree of Life in the age of phylogenomics
J. Mandel, M. Barker, Randall J. Bayer, R. Dikow +10 more
201770 citations
Semantic Scholar
Between Two Fern Genomes
Emily B. Sessa, J. Banks, M. Barker, J. Der +15 more
2014GigaScience68 citations Open access
Semantic Scholar
Establishing genomic tools and resources for Guizotia abyssinica (L.f.) Cass.—the development of a library of expressed sequence tags, microsatellite loci, and the sequencing of its chloroplast genome
H. Dempewolf, N. Kane, Katherine L. Ostevik, M. Geleta +7 more
2010Molecular Ecology Resources64 citations
Semantic Scholar
Modelling of gene loss propensity in the pangenomes of three Brassica species suggests different mechanisms between polyploids and diploids
P. Bayer, Armin Scheben, Agnieszka A. Golicz, Yuxuan Yuan +19 more
2021Plant Biotechnology Journal62 citations Open access
Semantic Scholar
Genome size evolution in the diverse insect order Trichoptera
J. Heckenhauer, P. Frandsen, John S. Sproul, Zheng Li +7 more
2021bioRxiv53 citations Open access
Semantic Scholar
Sequencing and Analyzing the Transcriptomes of a Thousand Species Across the Tree of Life for Green Plants.
Ga-Ne K. S. Wong, D. Soltis, J. Leebens-Mack, N. Wickett +4 more
2019Annual Review of Plant Biology52 citations Open access
Semantic Scholar
The Chimonanthus salicifolius genome provides insight into magnoliids evolution and flavonoids biosynthesis.
Qundan Lv, Jie Qiu, Jie Liu, Zheng Li +10 more
2020The Plant Journal51 citations Open access
Semantic Scholar
A total evidence approach to understanding phylogenetic relationships and ecological diversity in Selaginella subg. Tetragonostachys.
N. Arrigo, J. Therrien, C. Anderson, M. Windham +2 more
2013American-Eurasian journal of botany48 citations Open access
Semantic Scholar
Inferring putative ancient whole-genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions
Zheng Li, M. Barker
2019bioRxiv46 citations Open access
Semantic Scholar
Phylogeny and multiple independent whole‐genome duplication events in the Brassicales
Makenzie E. Mabry, Julia M. Brose, Paul D. Blischak, B. Sutherland +12 more
2019bioRxiv45 citations Open access
Semantic Scholar
Genomics of Compositae crops: reference transcriptome assemblies and evidence of hybridization with wild relatives
Kathryn A. Hodgins, Z. Lai, Luiz O. Oliveira, D. Still +9 more
2014Molecular Ecology Resources44 citations
Semantic Scholar
Genes derived from ancient polyploidy have higher genetic diversity and are associated with domestication in Brassica rapa
Xinshuai Qi, Hong An, T. E. Hall, Chenlu Di +6 more
2019bioRxiv38 citations Open access
Semantic Scholar
Duplications and Turnover in Plant Genomes
M. Barker, Gregory J. Baute, Shao-Lun Liu
201238 citations
Semantic Scholar
Karyotype and Genome Evolution in Pteridophytes
M. Barker
201337 citations
Semantic Scholar
The Small Nuclear Genomes of Selaginella Are Associated with a Low Rate of Genome Size Evolution
A. Baniaga, N. Arrigo, M. Barker
2016Genome Biology and Evolution34 citations Open access
Semantic Scholar
Inferring the Demographic History of Inbred Species From Genome-Wide SNP Frequency Data
Paul D. Blischak, M. Barker, Ryan N. Gutenkunst
2019bioRxiv33 citations Open access
Semantic Scholar
Animal chromosome counts reveal a similar range of chromosome numbers but with less polyploidy in animals compared to flowering plants
Cristian Román‐Palacios, C. A. Medina, Shing H. Zhan, M. Barker
2021Journal of Evolutionary Biology30 citations Open access
Semantic Scholar
Is hybridization driving the evolution of climatic niche in Alyssum montanum.
N. Arrigo, Marylaure de La Harpe, G. Litsios, Judita Zozomová-Lihová +4 more
2016American-Eurasian journal of botany30 citations Open access
Semantic Scholar
Demographic History Inference and the Polyploid Continuum
Paul D. Blischak, Mathews Sajan, M. Barker, Ryan N. Gutenkunst
2023bioRxiv25 citations Open access
Semantic Scholar

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J. Der — researcher profile on SciRah

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