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J. Bacardit · SciRah

Researcher profile · Semantic Scholar

J. Bacardit

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J. Bacardit — researcher profile on SciRah

h-index: 37
Works: 148
Citations: 7,190

Most-cited papers

Single-cell multi-omics analysis of the immune response in COVID-19
E. Stephenson, G. Reynolds, R. Botting, F. Calero-Nieto +64 more
2021Nature Medicine652 citations Open access
Semantic Scholar
Decoding human fetal liver haematopoiesis
Dorin-Mirel Popescu, R. Botting, E. Stephenson, Kile Green +52 more
2019Nature535 citations Open access
Semantic Scholar
Developmental cell programs are co-opted in inflammatory skin disease
G. Reynolds, Peter Vegh, J. Fletcher, E. Poyner +45 more
2021Science468 citations Open access
Semantic Scholar
MRPR: A MapReduce solution for prototype reduction in big data classification
I. Triguero, Daniel Peralta, J. Bacardit, S. García +1 more
2015Neurocomputing223 citations Open access
Semantic Scholar
Application of Machine Learning to Proteomics Data: Classification and Biomarker Identification in Postgenomics Biology
A. Swan, A. Mobasheri, D. Allaway, S. Liddell +1 more
2013Omics222 citations Open access
Semantic Scholar
The eukaryotic N-end rule pathway: conserved mechanisms and diverse functions.
D. Gibbs, J. Bacardit, A. Bachmair, M. Holdsworth
2014Trends in Cell Biology170 citations Open access
Semantic Scholar
Osteoarthritis endotype discovery via clustering of biochemical marker data
F. Angelini, P. Widera, A. Mobasheri, J. Blair +12 more
2022Annals of the Rheumatic Diseases147 citations Open access
Semantic Scholar
Blood and immune development in human fetal bone marrow and Down syndrome
Laura Jardine, S. Webb, Issac Goh, Mariana Quiroga Londoño +60 more
2021Nature138 citations Open access
Semantic Scholar
ROSEFW-RF: The winner algorithm for the ECBDL'14 big data competition: An extremely imbalanced big data bioinformatics problem
I. Triguero, Sara del Río, V. López, J. Bacardit +2 more
2015Knowledge-Based Systems134 citations Open access
Semantic Scholar
Using Rule-Based Machine Learning for Candidate Disease Gene Prioritization and Sample Classification of Cancer Gene Expression Data
E. Glaab, J. Bacardit, J. Garibaldi, N. Krasnogor
2012PLoS ONE130 citations Open access
Semantic Scholar
Large‐scale data mining using genetics‐based machine learning
J. Bacardit, Xavier Llorà
2013Annual Conference on Genetic and Evolutionary Computation120 citations
Semantic Scholar
Prediction of human population responses to toxic compounds by a collaborative competition
F. Eduati, L. Mangravite, Tao Wang, Hao Tang +120 more
2015Nature Biotechnology112 citations Open access
Semantic Scholar
Automated Individual Pig Localisation, Tracking and Behaviour Metric Extraction Using Deep Learning
Jake Cowton, I. Kyriazakis, J. Bacardit
2019IEEE Access110 citations Open access
Semantic Scholar
Functional Network Construction in Arabidopsis Using Rule-Based Machine Learning on Large-Scale Data Sets[C][W][OA]
G. Bassel, E. Glaab, J. Marquez, M. Holdsworth +1 more
2011The Plant Cell109 citations Open access
Semantic Scholar
Automatic recognition of feeding and foraging behaviour in pigs using deep learning
Ali Alameer, I. Kyriazakis, Hillary A Dalton, Amy L. Miller +1 more
2020Biosystems Engineering96 citations Open access
Semantic Scholar
Automated recognition of postures and drinking behaviour for the detection of compromised health in pigs
A. Alameer, I. Kyriazakis, J. Bacardit
2020Scientific Reports93 citations Open access
Semantic Scholar
Cohort profile: The Applied Public-Private Research enabling OsteoArthritis Clinical Headway (IMI-APPROACH) study: a 2-year, European, cohort study to describe, validate and predict phenotypes of osteoarthritis using clinical, imaging and biochemical markers
E. V. van Helvoort, W. V. van Spil, M. Jansen, P. Welsing +16 more
2020BMJ Open72 citations Open access
Semantic Scholar
Stratification of amyotrophic lateral sclerosis patients: a crowdsourcing approach
R. Kueffner, N. Zach, M. Bronfeld, Raquel Norel +104 more
2018Scientific Reports66 citations Open access
Semantic Scholar
Multi-classifier prediction of knee osteoarthritis progression from incomplete imbalanced longitudinal data
P. Widera, P. Welsing, C. Ladel, J. Loughlin +6 more
2019Scientific Reports64 citations Open access
Semantic Scholar
A machine learning heuristic to identify biologically relevant and minimal biomarker panels from omics data
A. Swan, D. Stekel, C. Hodgman, D. Allaway +3 more
2015BMC Genomics60 citations Open access
Semantic Scholar
A Combined Deep Learning GRU-Autoencoder for the Early Detection of Respiratory Disease in Pigs Using Multiple Environmental Sensors
Jake Cowton, I. Kyriazakis, T. Plötz, J. Bacardit
2018Italian National Conference on Sensors59 citations Open access
Semantic Scholar
WeFold: A Coopetition for Protein Structure Prediction
George A. Khoury, A. Liwo, F. Khatib, Hong-Yi Zhou +26 more
2014Proteins: Structure, Function, and Bioinformatics57 citations Open access
Semantic Scholar
Contact map prediction using a large-scale ensemble of rule sets and the fusion of multiple predicted structural features
J. Bacardit, P. Widera, A. Márquez-Chamorro, F. Divina +2 more
2012Bioinform.50 citations Open access
Semantic Scholar
The intersection of evolutionary computation and explainable AI
J. Bacardit, A. Brownlee, S. Cagnoni, Giovanni Iacca +2 more
2022GECCO Companion38 citations Open access
Semantic Scholar
Enhancing the scalability of a genetic algorithm to discover quantitative association rules in large-scale datasets
M. Martínez-Ballesteros, J. Bacardit, A. Troncoso, J. Riquelme
2015Integr. Comput. Aided Eng.38 citations Open access
Semantic Scholar
Deep learning-based automated speech detection as a marker of social functioning in late-life depression
Bethany Little, Ossama S. Alshabrawy, Daniel Stow, I. Ferrier +9 more
2020Psychological Medicine35 citations Open access
Semantic Scholar
Large-Scale Experimental Evaluation of Cluster Representations for Multiobjective Evolutionary Clustering
A. Garcia-Piquer, A. Fornells, J. Bacardit, A. Orriols-Puig +1 more
2014IEEE Transactions on Evolutionary Computation34 citations Open access
Semantic Scholar
GPU-SME-kNN: Scalable and memory efficient kNN and lazy learning using GPUs
P. D. Gutiérrez, M. Lastra, J. Bacardit, J. M. Benítez +1 more
2016Information Sciences32 citations Open access
Semantic Scholar
Using Wearable Activity Trackers to Predict Type 2 Diabetes: Machine Learning–Based Cross-sectional Study of the UK Biobank Accelerometer Cohort
Benjamin Lam, M. Catt, Sophie Cassidy, J. Bacardit +5 more
2021JMIR Diabetes31 citations Open access
Semantic Scholar
The application of radiomics in laryngeal cancer.
A. Rajgor, S. Patel, David McCulloch, B. Obara +6 more
2021British Journal of Radiology28 citations Open access
Semantic Scholar
Applications of Evolutionary Computation
Giovanni Squillero, Paolo Burelli, J. Bacardit, A. Brabazon +17 more
2016Lecture Notes in Computer Science26 citations Open access
Semantic Scholar
Analysis of mass spectrometry data from the secretome of an explant model of articular cartilage exposed to pro-inflammatory and anti-inflammatory stimuli using machine learning
A. Swan, Kirsty L Hillier, J. Smith, D. Allaway +3 more
2013BMC Musculoskeletal Disorders23 citations Open access
Semantic Scholar
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12
C. Keasar, L. McGuffin, B. Wallner, G. Chopra +133 more
2018Scientific Reports20 citations Open access
Semantic Scholar
Large-scale experimental evaluation of GPU strategies for evolutionary machine learning
María A. Franco, J. Bacardit
2016Information Sciences19 citations Open access
Semantic Scholar
Heuristic for maximizing DNA reuse in synthetic DNA library assembly.
J. Blakes, Ofir Raz, U. Feige, J. Bacardit +4 more
2014ACS Synthetic Biology19 citations Open access
Semantic Scholar
RGIFE: a ranked guided iterative feature elimination heuristic for the identification of biomarkers
Nicola Lazzarini, J. Bacardit
2017BMC Bioinformatics18 citations Open access
Semantic Scholar
Reduced Neonatal Mortality in Meishan Piglets: A Role for Hepatic Fatty Acids?
H. Fainberg, Katherine Bodley, J. Bacardit, Dongfang Li +5 more
2012PLoS ONE18 citations Open access
Semantic Scholar
Identification of CNGB1 as a Predictor of Response to Neoadjuvant Chemotherapy in Muscle-Invasive Bladder Cancer
A. Hepburn, Nicola Lazzarini, R. Veeratterapillay, L. Wilson +2 more
2021Cancers14 citations Open access
Semantic Scholar
Baseline clinical characteristics of predicted structural and pain progressors in the IMI-APPROACH knee OA cohort
E. V. van Helvoort, C. Ladel, S. Mastbergen, M. Kloppenburg +7 more
2021RMD Open13 citations Open access
Semantic Scholar
Insight from data analytics with an automotive aftermarket SME
Wayne S. Smith, S. Coleman, J. Bacardit, S. Coxon
2019Quality and Reliability Engineering International13 citations Open access
Semantic Scholar
Hard Data Analytics Problems Make for Better Data Analysis Algorithms: Bioinformatics as an Example
J. Bacardit, P. Widera, Nicola Lazzarini, N. Krasnogor
2014Big Data13 citations Open access
Semantic Scholar
Interpretable trading pattern designed for machine learning applications
A. Sokolovsky, Luca Arnaboldi, J. Bacardit, Thomas Gross
2023Machine Learning with Applications12 citations Open access
Semantic Scholar
Curating a longitudinal research resource using linked primary care EHR data—a UK Biobank case study
Philip Darke, Sophie Cassidy, M. Catt, R. Taylor +2 more
2021J. Am. Medical Informatics Assoc.12 citations Open access
Semantic Scholar
Functional networks inference from rule-based machine learning models
Nicola Lazzarini, Widera Paweł, S. Williamson, R. Heer +2 more
2016BioData Mining12 citations Open access
Semantic Scholar
GAssist vs. BioHEL: critical assessment of two paradigms of genetics-based machine learning
María A. Franco, N. Krasnogor, J. Bacardit
2013Soft Computing - A Fusion of Foundations, Methodologies and Applications12 citations Open access
Semantic Scholar
Post-processing operators for decision lists
María A. Franco, N. Krasnogor, J. Bacardit
2012Annual Conference on Genetic and Evolutionary Computation12 citations
Semantic Scholar
Prediction of growth in grower-finisher pigs using recurrent neural networks
C. Taylor, Jonathan Guy, J. Bacardit
2022Biosystems Engineering11 citations Open access
Semantic Scholar
Predicted and actual 2-year structural and pain progression in the IMI-APPROACH knee osteoarthritis cohort
E. V. van Helvoort, M. Jansen, A. C. Marijnissen, M. Kloppenburg +14 more
2022Rheumatology10 citations Open access
Semantic Scholar
Automatic Tuning of Rule-Based Evolutionary Machine Learning via Problem Structure Identification
María A. Franco, N. Krasnogor, J. Bacardit
2020IEEE Computational Intelligence Magazine10 citations Open access
Semantic Scholar
Scaling-up multiobjective evolutionary clustering algorithms using stratification
A. Garcia-Piquer, J. Bacardit, A. Fornells, E. Golobardes
2017Pattern Recognition Letters10 citations Open access
Semantic Scholar

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