B. Obara

Most-cited papers

Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana
A. Roeder, V. Chickarmane, Alexandre Cunha, B. Obara +2 more
2010PLoS Biology313 citations Open access
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Style Augmentation: Data Augmentation via Style Randomization
Philip T. G. Jackson, Amir Atapour-Abarghouei, Stephen Bonner, T. Breckon +1 more
2018CVPR Workshops212 citations
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Bisque: a platform for bioimage analysis and management
Kristian Kvilekval, D. Fedorov, B. Obara, Ambuj K. Singh +1 more
2009Bioinform.199 citations Open access
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Evaluation and benchmark for biological image segmentation
E. Gelasca, J. Byun, B. Obara, B. S. Manjunath
20082008 15th IEEE International Conference on Image Processing184 citations Open access
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Silencing of CDK5 Reduces Neurofibrillary Tangles in Transgenic Alzheimer's Mice
D. Piedrahita, Israel Hernández, Alejandro López-Tobón, D. Fedorov +8 more
2010Journal of Neuroscience172 citations Open access
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Analysis of fungal networks
Luke Heaton, B. Obara, V. Grau, Nick S. Jones +3 more
2012136 citations Open access
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The Multiscale Bowler-Hat Transform for Blood Vessel Enhancement in Retinal Images
Cigdem Sazak, C. Nelson, B. Obara
2017Pattern Recognition75 citations Open access
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Flagellar Hook Flexibility Is Essential for Bundle Formation in Swimming Escherichia coli Cells
Mostyn T. Brown, Bradley C. Steel, Claudio Silvestrin, David A. Wilkinson +5 more
2012Journal of Bacteriology74 citations Open access
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CDC-42 and RAC-1 regulate opposite chemotropisms in Neurospora crassa
Alexander Lichius, A. Goryachev, M. Fricker, B. Obara +2 more
2014Journal of Cell Science53 citations Open access
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Contrast-Independent Curvilinear Structure Detection in Biomedical Images
B. Obara, M. Fricker, D. Gavaghan, V. Grau
2012IEEE Transactions on Image Processing53 citations Open access
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A bioimage informatics approach to automatically extract complex fungal networks
B. Obara, V. Grau, M. Fricker
2012Bioinform.43 citations Open access
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A biosegmentation benchmark for evaluation of bioimage analysis methods
Elisa Drelie Gelasca, B. Obara, D. Fedorov, Kristian Kvilekval +1 more
2009BMC Bioinformatics43 citations Open access
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Bacterial cell identification in differential interference contrast microscopy images
B. Obara, Mark A. J. Roberts, J. Armitage, V. Grau
2013BMC Bioinformatics39 citations Open access
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Exploring the Semantic Content of Unsupervised Graph Embeddings: An Empirical Study
Stephen Bonner, Ibad Kureshi, John Brennan, G. Theodoropoulos +2 more
2018Data Science and Engineering35 citations Open access
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Identification of transcrystalline microcracks observed in microscope images of a dolomite structure using image analysis methods based on linear structuring element processing
B. Obara
2007Computational Geosciences33 citations Open access
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The application of radiomics in laryngeal cancer.
A. Rajgor, S. Patel, David McCulloch, B. Obara +6 more
2021British Journal of Radiology28 citations Open access
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A new algorithm using image colour system transformation for rock grain segmentation
B. Obara
200727 citations Open access
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Temporal Neighbourhood Aggregation: Predicting Future Links in Temporal Graphs via Recurrent Variational Graph Convolutions
Stephen Bonner, Amir Atapour-Abarghouei, Philip T. G. Jackson, John Brennan +4 more
20192019 IEEE International Conference on Big Data (Big Data)25 citations Open access
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Automated analysis of Physarum network structure and dynamics
M. Fricker, Dai Akita, Luke Heaton, Nick S. Jones +2 more
2016International Conference on Bio-inspired Information and Communications Technologies24 citations Open access
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Macular hole morphology and measurement using an automated three-dimensional image segmentation algorithm
Yun-Zi Chen, A. V. Nasrulloh, Ian Wilson, Caspar Geenen +3 more
2020BMJ Open Ophthalmology22 citations Open access
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Evolution of Electronic Circuits using Carbon Nanotube Composites
M. K. Massey, A. Kotsialos, Diogo Volpati, E. Vissol-Gaudin +6 more
2016Scientific Reports21 citations Open access
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Runway detection in High Resolution remote sensing data
Philip T. G. Jackson, C. Nelson, J. Schiefele, B. Obara
2015International Symposium on Image and Signal Processing and Analysis21 citations Open access
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Multi-Scale Segmentation and Surface Fitting for Measuring 3-D Macular Holes
A. V. Nasrulloh, Chris G. Willcocks, Philip T. G. Jackson, Caspar Geenen +3 more
2018IEEE Transactions on Medical Imaging19 citations Open access
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A novel method for quantified, superresolved, three-dimensional colocalisation of isotropic, fluorescent particles
B. Obara, A. Jabeen, N. Fernández, P. Laissue
2013Histochemistry and Cell Biology19 citations Open access
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Utilisation of the image analysis method for the detection of the morphological anisotropy of calcite grains in marble
B. Obara, A. Kožušníková
200718 citations Open access
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Temporal Graph Offset Reconstruction: Towards Temporally Robust Graph Representation Learning
Stephen Bonner, John Brennan, Ibad Kureshi, G. Theodoropoulos +2 more
20182018 IEEE International Conference on Big Data (Big Data)15 citations Open access
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Quantified Colocalization Reveals Heterotypic Histocompatibility Class I Antigen Associations on Trophoblast Cell Membranes: Relevance for Human Pregnancy1
A. Jabeen, José M Miranda-Sayago, B. Obara, P. Spencer +5 more
2013Biology of Reproduction15 citations Open access
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Predicting Postoperative Vision for Macular Hole with Automated Image Analysis
D. Murphy, A. V. Nasrulloh, C. Lendrem, S. Graziado +4 more
2020Ophthalmology Retina14 citations Open access
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Coherence enhancing diffusion filtering based on the Phase Congruency Tensor
B. Obara, M. Fricker, V. Grau
2012IEEE International Symposium on Biomedical Imaging14 citations Open access
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Visual Siamese Clustering for Cosmetic Product Recommendation
Christopher J. Holder, B. Obara, Stephen Ricketts
2018ACCV Workshops12 citations Open access
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Segmentation of Preretinal Space in Optical Coherence Tomography Images Using Deep Neural Networks
Agnieszka Stankiewicz, T. Marciniak, A. Dąbrowski, M. Stopa +2 more
2021Italian National Conference on Sensors11 citations Open access
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2D and 3D Vascular Structures Enhancement via Multiscale Fractional Anisotropy Tensor
Haifa F. Alhasson, Shuaa S. Alharbi, B. Obara
2018ECCV Workshops11 citations Open access
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Phenotypic Profiling of High Throughput Imaging Screens with Generic Deep Convolutional Features
Philip T. G. Jackson, Yin-Hai Wang, Sinead Knight, Hong-Ming Chen +4 more
2019IAPR International Workshop on Machine Vision Applications10 citations Open access
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Curvilinear Structure Enhancement by Multiscale Top-Hat Tensor in 2D/3D Images
Shuaa S. Alharbi, Cigdem Sazak, C. Nelson, B. Obara
2018IEEE International Conference on Bioinformatics and Biomedicine10 citations Open access
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Extracting 3D Parametric Curves from 2D Images of Helical Objects
Chris G. Willcocks, Philip T. G. Jackson, C. Nelson, B. Obara
2017IEEE Transactions on Pattern Analysis and Machine Intelligence10 citations Open access
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Contrast-independent curvilinear structure enhancement in 3D biomedical images
Cigdem Sazak, B. Obara
2017IEEE International Symposium on Biomedical Imaging8 citations Open access
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An image processing algorithm for the reversed transformation of rotated microscope images
B. Obara
2007Computational Geosciences8 citations Open access
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The multiscale top-hat tensor enables specific enhancement of curvilinear structures in 2D and 3D images.
Shuaa S. Alharbi, Cigdem Sazak, C. Nelson, Haifa F. Alhasson +1 more
2020Methods7 citations Open access
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A Conceptual Framework for Social Movements Analytics for National Security
Pedro Cárdenas, G. Theodoropoulos, B. Obara, Ibad Kureshi
2018International Conference on Conceptual Structures7 citations Open access
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Web Insights for National Security: Analysing Participative Online Activity to Interpret Crises
Pedro Cárdenas, Georgios Theodoropoulos, B. Obara
2019IEEE International Conference on Cognitive Informatics and Cognitive Computing6 citations Open access
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Blobs and curves: object-based colocalisation for plant cells.
C. Nelson, Patrick J Duckney, Timothy J. Hawkins, M. Deeks +3 more
2015Functional Plant Biology6 citations Open access
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Contrast independent detection of branching points in network-like structures
B. Obara, M. Fricker, V. Grau
2012Medical Imaging6 citations Open access
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AUTOMATIC NUCLEI DETECTION AND DATAFLOW IN BISQUIK SYSTEM
B. Obara, J. Byun, D. Fedorov, B. S. Manjunath
20076 citations
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Application of the image analysis method to the detection of transcrystalline microcracks observed in microscope images of dolomite and granite structures
B. Obara
20056 citations
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Analysing Social Media as a Hybrid Tool to Detect and Interpret likely Radical Behavioural Traits for National Security
Pedro Cárdenas, B. Obara, Georgios Theodoropoulos, Ibad Kureshi
20192019 IEEE International Conference on Big Data (Big Data)5 citations Open access
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The Multiscale Bowler-Hat Transform for Vessel Enhancement in 3D Biomedical Images
Cigdem Sazak, C. Nelson, B. Obara
2018British Machine Vision Conference5 citations
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Evaluating the quality of graph embeddings via topological feature reconstruction
Stephen Bonner, John Brennan, Ibad Kureshi, G. Theodoropoulos +2 more
20172017 IEEE International Conference on Big Data (Big Data)5 citations Open access
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Interactive GPU active contours for segmenting inhomogeneous objects
Chris G. Willcocks, Philip T. G. Jackson, C. Nelson, A. V. Nasrulloh +1 more
2017Journal of Real-Time Image Processing5 citations Open access
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The impact of skull bone intensity on the quality of compressed CT neuro images
I. Kowalik-Urbaniak, E. Vrscay, Zhou Wang, C. Cavaro-Ménard +3 more
2012Other Conferences5 citations Open access
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Segmentation of ascidian notochord cells in DIC timelapse images
B. Obara, Michael T. Veeman, J. Choi, W. Smith +1 more
2011Microscopy research and technique (Print)5 citations Open access
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