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A. Ramos · SciRah

Researcher profile · Semantic Scholar

A. Ramos

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A. Ramos — researcher profile on SciRah

h-index: 34
Works: 91
Citations: 4,087

Most-cited papers

RNA recognition by a Staufen double‐stranded RNA‐binding domain
A. Ramos, Stefan Grünert, Jan Adams, David R. Micklem +5 more
2000EMBO Journal378 citations Open access
Semantic Scholar
The RNA-binding Protein KSRP Promotes the Biogenesis of a Subset of miRNAs
M. Trabucchi, P. Briata, M. García-Mayoral, A. Haase +4 more
2009Nature328 citations Open access
Semantic Scholar
Two-Dimensional NMR Lineshape Analysis
C. Waudby, A. Ramos, Lisa D. Cabrita, J. Christodoulou
2016Scientific Reports191 citations Open access
Semantic Scholar
The role of Tudor domains in germline development and polar granule architecture
A. Arkov, Ju-Yu S. Wang, A. Ramos, R. Lehmann
2006Development147 citations Open access
Semantic Scholar
The double‐stranded RNA‐binding motif, a versatile macromolecular docking platform
Kung-Yao Chang, A. Ramos
2005The FEBS Journal140 citations
Semantic Scholar
KH-RNA interactions: back in the groove.
G. Nicastro, I. Taylor, A. Ramos
2015Current Opinion in Structural Biology139 citations Open access
Semantic Scholar
KH domains with impaired nucleic acid binding as a tool for functional analysis
D. Hollingworth, A. M. Candel, G. Nicastro, Stephen R. Martin +3 more
2012Nucleic Acids Research136 citations Open access
Semantic Scholar
G-quartet-dependent recognition between the FMRP RGG box and RNA.
A. Ramos, D. Hollingworth, A. Pastore
2003RNA: A publication of the RNA Society126 citations Open access
Semantic Scholar
Key features of the interaction between Pcf11 CID and RNA polymerase II CTD
C. Noble, D. Hollingworth, S. Martin, Valerie Ennis-Adeniran +4 more
2005Nature Structural &Molecular Biology122 citations
Semantic Scholar
The structure of the C-terminal KH domains of KSRP reveals a noncanonical motif important for mRNA degradation.
M. García-Mayoral, D. Hollingworth, L. Masino, I. Díaz-Moreno +5 more
2007Structure121 citations Open access
Semantic Scholar
H19 long noncoding RNA controls the mRNA decay promoting function of KSRP
M. Giovarelli, Gabriele Bucci, A. Ramos, D. Bordo +5 more
2014Proceedings of the National Academy of Sciences of the United States of America117 citations Open access
Semantic Scholar
A New Method To Detect Long-Range Protein−RNA Contacts: NMR Detection of Electron−Proton Relaxation Induced by Nitroxide Spin-Labeled RNA
A. Ramos, G. Varani
1998117 citations
Semantic Scholar
A cryptic RNA-binding domain mediates Syncrip recognition and exosomal partitioning of miRNA targets
Fruzsina Hóbor, A. Dallmann, N. Ball, Carla Cicchini +8 more
2018Nature Communications116 citations Open access
Semantic Scholar
Selective inhibition of microRNA accessibility by RBM38 is required for p53 activity
Nicolas Léveillé, Ran Elkon, V. Davalos, Vijayalaxmi Manoharan +10 more
2011Nature Communications112 citations Open access
Semantic Scholar
The structure of the N-terminal domain of the fragile X mental retardation protein: a platform for protein-protein interaction.
A. Ramos, D. Hollingworth, S. Adinolfi, M. Castets +4 more
2006Structure112 citations Open access
Semantic Scholar
PHOSPHORYLATION-MEDIATED UNFOLDING OF A KH DOMAIN REGULATES KSRP LOCALISATION VIA 14-3-3 BINDING
I. Díaz-Moreno, D. Hollingworth, T. Frenkiel, G. Kelly +6 more
2009Nature Structural &Molecular Biology101 citations Open access
Semantic Scholar
The N-terminus of the fragile X mental retardation protein contains a novel domain involved in dimerization and RNA binding.
S. Adinolfi, A. Ramos, S. R. Martin, F. Dalpiaz +4 more
2003Biochemistry94 citations
Semantic Scholar
Building RNA-protein granules: insight from the germline
A. Arkov, A. Ramos
2010Trends in Cell Biology85 citations Open access
Semantic Scholar
Structure of the acceptor stem of Escherichia coli tRNA Ala: role of the G3.U70 base pair in synthetase recognition.
A. Ramos, G. Varani
1997Nucleic Acids Research80 citations Open access
Semantic Scholar
Functional and molecular insights into KSRP function in mRNA decay.
P. Briata, Ching-Yi Chen, A. Ramos, R. Gherzi
2013Biochimica et Biophysica Acta75 citations
Semantic Scholar
The role of KSRP in mRNA decay and microRNA precursor maturation
R. Gherzi, Ching-Yi Chen, M. Trabucchi, A. Ramos +1 more
2010Wiley Interdisciplinary Reviews - RNA72 citations
Semantic Scholar
The sequence selectivity of KSRP explains its flexibility in the recognition of the RNA targets
M. García-Mayoral, I. Díaz-Moreno, D. Hollingworth, A. Ramos
2008Nucleic Acids Research69 citations Open access
Semantic Scholar
Molecular basis of FIR-mediated c-myc transcriptional control
C. Cukier, D. Hollingworth, S. Martin, G. Kelly +2 more
2010Nature Structural &Molecular Biology65 citations Open access
Semantic Scholar
Cyclic AMP signalling controls key components of malaria parasite host cell invasion machinery
Avnish Patel, Abigail J. Perrin, Helen R. Flynn, C. Bisson +10 more
2019PLoS Biology64 citations Open access
Semantic Scholar
The AXH module: an independently folded domain common to ataxin‐1 and HBP1
C. de Chiara, C. Giannini, S. Adinolfi, J. de Boer +5 more
2003FEBS Letters64 citations Open access
Semantic Scholar
Structure of the Rna15 RRM–RNA complex reveals the molecular basis of GU specificity in transcriptional 3′-end processing factors
C. Pancevac, D. Goldstone, A. Ramos, I. Taylor
2010Nucleic Acids Research58 citations Open access
Semantic Scholar
Mechanism of β-actin mRNA Recognition by ZBP1
G. Nicastro, A. M. Candel, Michael Uhl, A. Oregioni +4 more
2017Cell Reports56 citations Open access
Semantic Scholar
KSRP, many functions for a single protein.
P. Briata, Ching-Yi Chen, M. Giovarelli, M. Pasero +3 more
2011Frontiers in Bioscience56 citations Open access
Semantic Scholar
KSRP controls pleiotropic cellular functions.
R. Gherzi, Ching-Yi Chen, A. Ramos, P. Briata
2014Seminars in Cell and Developmental Biology48 citations
Semantic Scholar
Orientation of the central domains of KSRP and its implications for the interaction with the RNA targets
I. Díaz-Moreno, D. Hollingworth, G. Kelly, Stephen R. Martin +4 more
2010Nucleic Acids Research41 citations Open access
Semantic Scholar
Role of dimerization in KH/RNA complexes: the example of Nova KH3.
A. Ramos, D. Hollingworth, Sarah Major, S. Adinolfi +3 more
2002Biochemistry38 citations
Semantic Scholar
Recent solution structures of RNA and its complexes with drugs, peptides and proteins.
A. Ramos, Charles C. Gubser, Gabriele Varani
1997Current Opinion in Structural Biology36 citations
Semantic Scholar
An RRM–ZnF RNA recognition module targets RBM10 to exonic sequences to promote exon exclusion
K. M. Collins, Yaroslav A. Kainov, Evangelos Christodolou, Debashish Ray +5 more
2017Nucleic Acids Research35 citations Open access
Semantic Scholar
Terminal loop-mediated regulation of miRNA biogenesis: selectivity and mechanisms
Virginia Castilla-Llorente, G. Nicastro, A. Ramos
2013Biochemical Society Transactions35 citations Open access
Semantic Scholar
How to control miRNA maturation? Co-activators and co-repressors take the stage
M. Trabucchi, P. Briata, W. Filipowicz, M. Rosenfeld +2 more
200934 citations Open access
Semantic Scholar
Scaffold-independent analysis of RNA-protein interactions: the Nova-1 KH3-RNA complex.
B. Beuth, M. García-Mayoral, I. Taylor, A. Ramos
2007Journal of the American Chemical Society34 citations
Semantic Scholar
Non-canonical Guanine recognition mediates KSRP regulation of Let-7 biogenesis
G. Nicastro, M. García-Mayoral, D. Hollingworth, G. Kelly +4 more
2012Nature Structural &Molecular Biology33 citations Open access
Semantic Scholar
How to control miRNA maturation?
M. Trabucchi, P. Briata, W. Filipowicz, M. Rosenfeld +2 more
2009RNA Biology33 citations
Semantic Scholar
RNA polymerase II CTD phosphopeptides compete with RNA for the interaction with Pcf11.
D. Hollingworth, C. Noble, I. Taylor, A. Ramos
2006RNA: A publication of the RNA Society31 citations Open access
Semantic Scholar
Mapping the interfaces of protein-nucleic acid complexes usingcross-saturation
A. Ramos, G. Kelly, D. Hollingworth, A. Pastore +1 more
200030 citations
Semantic Scholar
KSRP Promotes the Maturation of a Group of miRNA Precuresors.
M. Trabucchi, P. Briata, W. Filipowicz, A. Ramos +2 more
2011Advances in Experimental Medicine and Biology27 citations
Semantic Scholar
Lin28a uses distinct mechanisms of binding to RNA and affects positively and negatively miRNA levels
J. Nowak, Fruzsina Hóbor, Á. Velasco, Nila +6 more
201626 citations
Semantic Scholar
Determination of the structure of the RNA complex of a double‐stranded RNA‐binding domain from Drosophila Staufen protein
A. Ramos, P. Bayer, G. Varani
1999Biopolymers25 citations
Semantic Scholar
Determining binding sites in protein–nucleic acid complexes by cross-saturation
A. Lane, G. Kelly, A. Ramos, T. Frenkiel
2001Journal of Biomolecular NMR23 citations
Semantic Scholar
IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties
R. Dagil, N. Ball, R. Ogrodowicz, Fruzsina Hóbor +5 more
2019Nucleic Acids Research22 citations Open access
Semantic Scholar
The role of a clinically important mutation in the fold and RNA-binding properties of KH motifs.
A. Ramos, D. Hollingworth, A. Pastore
2003RNA: A publication of the RNA Society22 citations Open access
Semantic Scholar
Structural basis for Fullerene geometry in a human endogenous retrovirus capsid
O. Acton, T. Grant, G. Nicastro, N. Ball +8 more
2019Nature Communications21 citations Open access
Semantic Scholar
Structure of a Spumaretrovirus Gag Central Domain Reveals an Ancient Retroviral Capsid
N. Ball, G. Nicastro, M. Dutta, Dominic J. Pollard +11 more
2016PLoS Pathogens20 citations Open access
Semantic Scholar
The devil is in the domain: understanding protein recognition of multiple RNA targets.
Glen R Gronland, A. Ramos
2017Biochemical Society Transactions17 citations Open access
Semantic Scholar
The structure of the RbBP5 β-propeller domain reveals a surface with potential nucleic acid binding sites
A. Mittal, Fruzsina Hóbor, Ying Zhang, S. Martin +3 more
2018Nucleic Acids Research16 citations Open access
Semantic Scholar

Frequent co-authors

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D. Hollingworth×16
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D. Hollingworth — researcher profile on SciRah
R. Gherzi×14
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R. Gherzi — researcher profile on SciRah
P. Briata×13
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P. Briata — researcher profile on SciRah
I. Taylor×10
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I. Taylor — researcher profile on SciRah

×9

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S. Martin — researcher profile on SciRah

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G. Kelly — researcher profile on SciRah

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G. Nicastro — researcher profile on SciRah

M. García-Mayoral×7

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M. García-Mayoral — researcher profile on SciRah

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A. Pastore — researcher profile on SciRah

M. Trabucchi×6

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M. Trabucchi — researcher profile on SciRah

Ching-Yi Chen×6

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Ching-Yi Chen — researcher profile on SciRah

I. Díaz-Moreno×5

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I. Díaz-Moreno — researcher profile on SciRah