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Jonathan J. Du · SciRah

Researcher profile · Semantic Scholar

Jonathan J. Du

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Jonathan J. Du — researcher profile on SciRah

h-index: 12
Works: 49
Citations: 594

Most-cited papers

A Guide to In Silico Drug Design
Yiqun Chang, Bryson A. Hawkins, Jonathan J. Du, P. Groundwater +2 more
2022Pharmaceutics220 citations Open access
Semantic Scholar
Structural basis of mammalian high-mannose N-glycan processing by human gut Bacteroides
B. Trastoy, Jonathan J. Du, E. Klontz, Chao Li +4 more
2020Nature Communications41 citations Open access
Semantic Scholar
Modulating antibody effector functions by Fc glycoengineering
M. García-Alija, B. Van Moer, D. Sastre, Tala Azzam +5 more
2023Biotechnology Advances39 citations Open access
Semantic Scholar
Using Electron Density to Predict Synthon Formation in a 4-Hydroxybenzoic Acid: 4,4′-Bipyridine Cocrystal
Jonathan J. Du, Stephen A. Stanton, P. A. Williams, Jennifer A. Ong +4 more
201823 citations Open access
Semantic Scholar
Structural insights into the mechanisms and specificities of IgG-active endoglycosidases.
Jonathan J. Du, E. Klontz, M. Guerin, B. Trastoy +1 more
2019Glycobiology22 citations Open access
Semantic Scholar
Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Diego E. Sastre, Nazneen Sultana, Marcos Navarro, Maroš Huličiak +8 more
2024Nature Communications17 citations Open access
Semantic Scholar
Mechanism of glycoform specificity and in vivo protection by an anti-afucosylated IgG nanobody
Aaron Gupta, Kevin Kao, Rachel Yamin, D. Oren +5 more
2023Nature Communications17 citations Open access
Semantic Scholar
Sculpting therapeutic monoclonal antibody N-glycans using endoglycosidases
B. Trastoy, Jonathan J. Du, M. García-Alija, Chao Li +4 more
2022Current Opinion in Structural Biology14 citations Open access
Semantic Scholar
An analysis of the experimental and theoretical charge density distributions of the piroxicam–saccharin co-crystal and its constituents
Jonathan J. Du, Linda Váradi, Peter A. Williams, P. Groundwater +3 more
201614 citations
Semantic Scholar
Potent efficacy of an IgG-specific endoglycosidase against IgG-mediated pathologies
Diego E. Sastre, S. Bournazos, Jonathan J. Du, E. J. Boder +10 more
2024Cell13 citations Open access
Semantic Scholar
Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE
M. García-Alija, Jonathan J. Du, Izaskun Ordóñez, Asier Diz-Vallenilla +9 more
2022Nature Communications13 citations Open access
Semantic Scholar
Understanding Hygroscopicity of Theophylline via a Novel Cocrystal Polymorph: A Charge Density Study.
Stephen A. Stanton, Jonathan J. Du, Felcia Lai, Gyte Stanton +5 more
2021Journal of Physical Chemistry A13 citations
Semantic Scholar
GH18 endo-β-N-acetylglucosaminidases use distinct mechanisms to process hybrid-type N-linked glycans
B. Trastoy, Jonathan J. Du, Chao Li, M. García-Alija +6 more
2021Journal of Biological Chemistry12 citations Open access
Semantic Scholar
The first non-discriminating TSPO ligands produced from a carbazole scaffold.
H. W. A. Cheng, Renee Sokias, E. Werry, L. Ittner +5 more
2019Journal of Medicinal Chemistry12 citations Open access
Semantic Scholar
A comparison of the experimental and theoretical charge density distributions in two polymorphic modifications of piroxicam.
Felcia Lai, Jonathan J. Du, Peter A. Williams, Linda Váradi +5 more
2016Physical Chemistry, Chemical Physics - PCCP12 citations Open access
Semantic Scholar
An mRNA-display derived cyclic peptide scaffold reveals the substrate binding interactions of an N-terminal cysteine oxidase
Yannasittha Jiramongkol, Karishma Patel, Jason Johansen-Leete, Joshua W. C. Maxwell +6 more
2025Nature Communications11 citations Open access
Semantic Scholar
The role of adjuvants in overcoming antibacterial resistance due to enzymatic drug modification.
Christy El-Khoury, Elissar Mansour, Yori Yuliandra, Felcia Lai +6 more
2022RSC Medicinal Chemistry11 citations Open access
Semantic Scholar
Monoclinic Paracetamol vs. Paracetamol-4,4′-Bipyridine Co-Crystal; What Is the Difference? A Charge Density Study
Jonathan J. Du, Felcia Lai, Linda Váradi, P. A. Williams +4 more
201810 citations Open access
Semantic Scholar
Correction: Experimental and theoretical charge density distribution in Pigment Yellow 101.
Jonathan J. Du, Linda Váradi, Jinlong Tan, Yiliang Zhao +3 more
2015Physical Chemistry, Chemical Physics - PCCP10 citations Open access
Semantic Scholar
An experimental and theoretical charge density study of theophylline and malonic acid cocrystallization
Bryson A. Hawkins, Jonathan J. Du, Felcia Lai, Stephen A. Stanton +5 more
2022RSC Advances9 citations Open access
Semantic Scholar
Tricyclic heterocycles display diverse sensitivity to the A147T TSPO polymorphism.
Renee Sokias, E. Werry, Hei Wun Alison Cheng, James H. Lloyd +9 more
2020European journal of medicinal chemistry9 citations Open access
Semantic Scholar
Analyzing Hydration Differences in Cocrystal Polymorphs: High-Resolution X-ray Investigation of Caffeine–Glutaric Acid Cocrystals
Bryson A. Hawkins, J. Han, Jonathan J. Du, Felcia Lai +5 more
2021Crystal Growth & Design7 citations Open access
Semantic Scholar
Asymmetrically glycosylated IgG1 antibodies are universal and drive human disease
Tala Azzam, S. Bournazos, Hasret Gunduz, T. Adams +14 more
2025Nature Communications6 citations Open access
Semantic Scholar
The multiple facets of Rab proteins modulating the cellular distribution of cholesterol from the late endosomal compartment.
M. K. L. Nguyen, C. Pinkenburg, Jonathan J. Du, Marc Bernaus-Esqué +3 more
2025Biochimica et biophysica acta. Molecular cell research6 citations Open access
Semantic Scholar
Mechanism of antibody-specific deglycosylation and immune evasion by Streptococcal IgG-specific endoglycosidases
B. Trastoy, Jonathan J. Du, J. Cifuente, L. Rudolph +13 more
2023Nature Communications6 citations Open access
Semantic Scholar
Insights into substrate recognition and specificity for IgG by Endoglycosidase S2
Asaminew H. Aytenfisu, Daniel J. Deredge, E. Klontz, Jonathan J. Du +2 more
2021bioRxiv6 citations Open access
Semantic Scholar
Exploring the Solubility of the Carbamazepine–Saccharin Cocrystal: A Charge Density Study
Jonathan J. Du, Stephen A. Stanton, Slaiman Fakih, Bryson A. Hawkins +5 more
2018Crystal Growth & Design6 citations
Semantic Scholar
Exploring the Binding of Barbital to a Synthetic Macrocyclic Receptor. A Charge Density Study.
Jonathan J. Du, J. Hanrahan, V. Solomon, Peter A. Williams +4 more
2018Journal of Physical Chemistry A4 citations Open access
Semantic Scholar
Structural insights into the activity of carbapenemases: understanding the mechanism of action of current inhibitors and informing the design of new carbapenem adjuvants.
Tahlia Hatzisarantinos, Elissar Mansour, Jonathan J. Du, M. Fares +2 more
2025RSC Medicinal Chemistry2 citations Open access
Semantic Scholar
Molecular mechanism of androgen receptor mutation in multigenerational mild androgen insensitivity syndrome
R. Pandher, Ruby Chang, Yiqun Chang, David E. Hibbs +5 more
2024Endocrine Connections2 citations Open access
Semantic Scholar
Combinatorially restricted computational design of protein-protein interfaces to produce IgG heterodimers
Tala Azzam, Jonathan J. Du, Maria W. Flowers, Adeela V Ali +10 more
2024Science Advances2 citations Open access
Semantic Scholar
Mass Spectrometry-Based Methods to Determine the Substrate Specificities and Kinetics of N-Linked Glycan Hydrolysis by Endo-β-N-Acetylglucosaminidases
Jonathan J. Du, D. Sastre, B. Trastoy, B. Roberts +6 more
2023Methods in molecular biology2 citations Open access
Semantic Scholar
Non-Antigenic Modulation of Antigen Receptor (TCR) Cβ-FG Loop Modulates Signalling: Implications of External Factors Influencing T-Cell Responses
N. Manolios, S. Pham, Guojiang Hou, Jonathan J. Du +2 more
2023International Journal of Molecular Sciences2 citations Open access
Semantic Scholar
The mechanistic basis for interprotomer deglycosylation of antibodies by corynebacterial IgG-specific endoglycosidases
Diego E. Sastre, S. Bournazos, Maroš Huličiak, Barbara Ann C Grace +19 more
2025Nature Communications1 citations Open access
Semantic Scholar
Mechanism of glycoform specificity and protection against antibody dependent enhancement by an anti-afucosylated IgG nanobody
Aaron Gupta, Kevin Kao, Rachel Yamin, D. Oren +5 more
2023bioRxiv1 citations Open access
Semantic Scholar
Exploring the excited-state charge transfer fluorescence profile of 7-hydroxycoumarin and 2-methylimidazole - a combined X-ray diffraction and theoretical approach.
Bryson A. Hawkins, Elias Y. Najib, Jonathan J. Du, Felcia Lai +3 more
2022Physical Chemistry, Chemical Physics - PCCP1 citations
Semantic Scholar
Data Mining ENCODE Data Predicts a Significant Role of SINA3 in Human Liver Cancer
M. Khushi, Usman Naseem, Jonathan J. Du, Anis Khan +1 more
2020International Conference on Neural Information Processing1 citations
Semantic Scholar
Small Molecules to Elevate Rab7-GTPase Activity and Lower Cholesterol Accumulation in Niemann-Pick Type C Disease
M. K. L. Nguyen, Maya R Nikenich, K. Seifert, C. Pinkenburg +23 more
2026Pharmaceutical Research0 citations Open access
Semantic Scholar
Investigation of reported small molecule P2Y6 receptor antagonists
Chianna Dane, André D. J. Mckenzie, Andrew P. Montgomery, Jonathan J. Du +2 more
2026Medicinal Chemistry Research0 citations Open access
Semantic Scholar
Squaramide Calix[4]pyrroles for Anion Transport
Patrick Wang, Mohamed Fares, David E. Hibbs, Jonathan J. Du +1 more
2026Croatica Chemica Acta0 citations Open access
Semantic Scholar
Translating Alzheimer’s disease proteomics into drug discovery opportunities
Eleanor Drummond, E. Werry, Tomas Kavanagh, Sian Genoud +5 more
2026Molecular Neurodegeneration Advances0 citations Open access
Semantic Scholar
Caffeine and 4‐Hydroxybenzoic Acid Cocrystal Hydrate: Preparation, Characterization, and Evaluation
S. Gogna, Jonathan J. Du, P. Groundwater, Mohamed Fares +4 more
2026ChemPhysChem0 citations Open access
Semantic Scholar
OR27-07 Molecular Mechanism of Androgen Receptor Mutation in Multigenerational Mild Androgen Insensitivity Syndrome
Ruby Chang, R. Pandher, David E Hibbs, Jonathan J. Du +4 more
2025Journal of the Endocrine Society0 citations Open access
Semantic Scholar
Influence of Halogen Substituents on the Photophysical Properties of 7-Hydroxycoumarin: Insights from Experimental and Theoretical Studies.
Bryson A. Hawkins, Liam D. Adair, W. Ryder, Jonathan J. Du +6 more
2024ChemPhysChem0 citations
Semantic Scholar
Antibody Modeling using Molecular Dynamics and Silcs Fragmaps
Asaminew H. Aytenfisu, Daniel J. Deredge, E. Klontz, Jonathan J. Du +2 more
2021Biophysical Journal0 citations Open access
Semantic Scholar
Experimental Charge Density and High Pressure Studies of Pharmaceutical Co-crystals
Jonathan J. Du
20180 citations
Semantic Scholar
CCDC 1474329: Experimental Crystal Structure Determination
Felcia Lai, Jonathan J. Du, Peter A. Williams, Linda Váradi +5 more
20160 citations
Semantic Scholar
Experimental and theoretical charge density distribution in Pigment Yellow 101.
Jonathan J. Du, Linda Váradi, Jinlong Tan, Yiliang Zhao +3 more
2015Physical Chemistry, Chemical Physics - PCCP0 citations Open access
Semantic Scholar
experimental and theoretical charge density distributions in two polymorphic modifications of piroxicam
Felcia Lai, Jonathan J. Du, P. A. Williams, Linda Váradi +5 more
0 citations
Semantic Scholar

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