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J. Hohlbein · SciRah

Researcher profile · Semantic Scholar

J. Hohlbein

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J. Hohlbein — researcher profile on SciRah

h-index: 25
Works: 77
Citations: 2,646

Most-cited papers

Precision and accuracy of single-molecule FRET measurements – a multi-laboratory benchmark study
B. Hellenkamp, Sonja Schmid, Olga Doroshenko, O. Opanasyuk +59 more
2017Nature Methods437 citations Open access
Semantic Scholar
Conformational transitions in DNA polymerase I revealed by single-molecule FRET
Y. Santoso, C. Joyce, O. Potapova, Ludovic Le Reste +4 more
2009Proceedings of the National Academy of Sciences of the United States of America238 citations Open access
Semantic Scholar
Defining the limits of single-molecule FRET resolution in TIRF microscopy.
Séamus Holden, Stephan Uphoff, J. Hohlbein, D. Yadin +3 more
2010Biophysical Journal185 citations Open access
Semantic Scholar
Alternating-laser excitation: single-molecule FRET and beyond.
J. Hohlbein, Timothy D. Craggs, T. Cordes
2014Chemical Society Reviews158 citations Open access
Semantic Scholar
Identifying molecular dynamics in single-molecule FRET experiments with burst variance analysis.
J. Torella, Séamus Holden, Y. Santoso, J. Hohlbein +1 more
2011Biophysical Journal127 citations Open access
Semantic Scholar
Design principles of a minimal auxin response system
Hirotaka Kato, S. Mutte, Hidemasa Suzuki, I. Crespo +14 more
2019bioRxiv104 citations Open access
Semantic Scholar
Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis
A. Freire-Rios, Keita Tanaka, I. Crespo, E. van der Wijk +8 more
2020Proceedings of the National Academy of Sciences of the United States of America98 citations Open access
Semantic Scholar
Conformational landscapes of DNA polymerase I and mutator derivatives establish fidelity checkpoints for nucleotide insertion
J. Hohlbein, Louise Aigrain, Timothy D. Craggs, Oya Bermek +5 more
2013Nature Communications90 citations Open access
Semantic Scholar
Surfing on a new wave of single-molecule fluorescence methods
J. Hohlbein, Kristofer Gryte, M. Heilemann, A. Kapanidis
2010Physical Biology85 citations Open access
Semantic Scholar
Visualisation of dCas9 target search in vivo using an open-microscopy framework
Koen J. A. Martens, Sam P. B. van Beljouw, Simon van der Els, J. Vink +6 more
2019Nature Communications82 citations Open access
Semantic Scholar
Förster resonance energy transfer and protein-induced fluorescence enhancement as synergetic multi-scale molecular rulers
E. Ploetz, Eitan Lerner, Florence Husada, M. Roelfs +4 more
2016Scientific Reports68 citations Open access
Semantic Scholar
Characterization of dark quencher chromophores as nonfluorescent acceptors for single-molecule FRET.
Ludovic Le Reste, J. Hohlbein, Kristofer Gryte, A. Kapanidis
2012Biophysical Journal65 citations Open access
Semantic Scholar
Phasor based single-molecule localization microscopy in 3D (pSMLM-3D): an algorithm for MHz localization rates using standard CPUs
Koen J. A. Martens, A. Bader, Sander Baas, B. Rieger +1 more
2017bioRxiv64 citations Open access
Semantic Scholar
A Quantitative Theoretical Framework For Protein-Induced Fluorescence Enhancement–Förster-Type Resonance Energy Transfer (PIFE-FRET)
Eitan Lerner, E. Ploetz, J. Hohlbein, T. Cordes +1 more
2016Journal of Physical Chemistry B55 citations Open access
Semantic Scholar
Open microscopy in the life sciences: quo vadis?
J. Hohlbein, Benedict Diederich, Barbora Marsíková, E. Reynaud +4 more
2021Nature Methods49 citations Open access
Semantic Scholar
Direct visualization of native CRISPR target search in live bacteria reveals Cascade DNA surveillance mechanism
J. Vink, Koen J. A. Martens, Marnix Vlot, Rebecca E. McKenzie +5 more
2019bioRxiv47 citations Open access
Semantic Scholar
Camera-based single-molecule FRET detection with improved time resolution.
S. Farooq, J. Hohlbein
2015Physical Chemistry, Chemical Physics - PCCP44 citations Open access
Semantic Scholar
Real-time single-molecule studies of the motions of DNA polymerase fingers illuminate DNA synthesis mechanisms
G. Evans, J. Hohlbein, Timothy D. Craggs, Louise Aigrain +1 more
2015Nucleic Acids Research44 citations Open access
Semantic Scholar
Confined diffusion in ordered nanoporous alumina membranes.
J. Hohlbein, M. Steinhart, C. Schiene-Fischer, A. Benda +2 more
2007Small41 citations
Semantic Scholar
Substrate conformational dynamics facilitate structure-specific recognition of gapped DNA by DNA polymerase
Timothy D. Craggs, M. Sustarsic, A. Plochowietz, M. Mosayebi +7 more
2019Nucleic Acids Research38 citations Open access
Semantic Scholar
Visualization of BRI1 and SERK3/BAK1 Nanoclusters in Arabidopsis Roots
Stefan J. Hutten, Danny S. Hamers, Marije Aan den Toorn, W. van Esse +5 more
2017PLoS ONE38 citations Open access
Semantic Scholar
Simple scheme for rapid three-dimensional orientation determination of the emission dipole of single molecules
J. Hohlbein, C. Hübner
200538 citations
Semantic Scholar
Publisher Correction: Image Data Resource: a bioimage data integration and publication platform
B. Hellenkamp, Sonja Schmid, Olga Doroshenko, O. Opanasyuk +59 more
2018Nature Methods36 citations Open access
Semantic Scholar
Quantitative Spatiotemporal Mapping of Lipid and Protein Oxidation in Mayonnaise
Suyeon Yang, A. Verhoeff, Donny W H Merkx, J. V. van Duynhoven +1 more
2020Antioxidants29 citations Open access
Semantic Scholar
Extracting Transition Rates in Particle Tracking Using Analytical Diffusion Distribution Analysis.
J. Vink, S. Brouns, J. Hohlbein
2020Biophysical Journal26 citations Open access
Semantic Scholar
Recurrence and photon statistics in fluorescence fluctuation spectroscopy.
G. Zumofen, J. Hohlbein, C. Hübner
2004Physical Review Letters26 citations
Semantic Scholar
Cooperative action of separate interaction domains promotes high-affinity DNA binding of Arabidopsis thaliana ARF transcription factors
Mattia Fontana, M. Roosjen, Isidro Crespo García, W. van den Berg +4 more
2022bioRxiv24 citations Open access
Semantic Scholar
Enabling Spectrally Resolved Single-Molecule Localization Microscopy at High Emitter Densities
Koen J. A. Martens, Martijn I. Gobes, Emmanouil Archontakis, Roger R. Brillas +3 more
2022bioRxiv24 citations Open access
Semantic Scholar
A single-molecule FRET sensor for monitoring DNA synthesis in real time.
C. Fijen, Alejandro Montón Silva, A. Hochkoeppler, J. Hohlbein
2017Physical Chemistry, Chemical Physics - PCCP21 citations Open access
Semantic Scholar
Three-dimensional orientation determination of the emission dipoles of single molecules: the shot-noise limit.
J. Hohlbein, C. Hübner
2008Journal of Chemical Physics21 citations
Semantic Scholar
Temporal analysis of relative distances (TARDIS) is a robust, parameter-free alternative to single-particle tracking
Koen J. A. Martens, Bartosz Turkowyd, J. Hohlbein, Ulrike Endesfelder
2023bioRxiv20 citations Open access
Semantic Scholar
Unravelling mechanisms of protein and lipid oxidation in mayonnaise at multiple length scales.
Suyeon Yang, Machi Takeuchi, H. Friedrich, J. V. van Duynhoven +1 more
2022Food Chemistry20 citations Open access
Semantic Scholar
Enabling single-molecule localization microscopy in turbid food emulsions
Abbas Jabermoradi, Suyeon Yang, Martijn I. Gobes, J. V. van Duynhoven +1 more
2021bioRxiv18 citations Open access
Semantic Scholar
Studying DNA–protein interactions with single-molecule Förster resonance energy transfer
S. Farooq, C. Fijen, J. Hohlbein
2013Protoplasma18 citations Open access
Semantic Scholar
High-throughput, non-equilibrium studies of single biomolecules using glass-made nanofluidic devices.
Mattia Fontana, C. Fijen, S. Lemay, K. Mathwig +1 more
2019Lab on a Chip17 citations Open access
Semantic Scholar
Complex Coacervate Core Micelles with Spectroscopic Labels for Diffusometric Probing of Biopolymer Networks.
N. Bourouina, D. D. de Kort, F. Hoeben, H. Janssen +4 more
2015Langmuir17 citations Open access
Semantic Scholar
Single-molecule localisation microscopy as an emerging tool to probe multiscale food structures
J. Hohlbein
2021Food Structure15 citations Open access
Semantic Scholar
Live-cell imaging reveals the trade-off between target search flexibility and efficiency for Cas9 and Cas12a
Lorenzo Olivi, Cleo Bagchus, Victor D. Pool, Ezra T. Bekkering +7 more
2023bioRxiv14 citations Open access
Semantic Scholar
New technologies for DNA analysis--a review of the READNA Project.
Steven McGinn, David L. V. Bauer, T. Brefort, Liqin Dong +63 more
2016New Biotechnology12 citations Open access
Semantic Scholar
In-situ optical characterisation of porous alumina
J. Hohlbein, U. Rehn, R. Wehrspohn
200412 citations
Semantic Scholar
Spatiotemporal Heterogeneity of κ-Carrageenan Gels Investigated via Single-Particle-Tracking Fluorescence Microscopy
Koen J. A. Martens, J. V. van Duynhoven, J. Hohlbein
2020Langmuir11 citations Open access
Semantic Scholar
An open microscopy framework suited for tracking dCas9 in live bacteria
Koen J. A. Martens, Sam P. B. van Beljouw, Simon van der Els, Sander Baas +5 more
2018bioRxiv9 citations Open access
Semantic Scholar
Evaluating single-particle tracking by photo-activation localization microscopy (sptPALM) in Lactococcus lactis
Sam P. B. van Beljouw, Simon van der Els, Koen J. A. Martens, M. Kleerebezem +2 more
2019Physical Biology8 citations Open access
Semantic Scholar
Single Molecule 3D Orientation in Time and Space: A 6D Dynamic Study on Fluorescently Labeled Lipid Membranes
R. Börner, Nicky Ehrlich, J. Hohlbein, C. Hübner
2016Journal of Fluorescence8 citations Open access
Semantic Scholar
Probing the Conformational Landscape of DNA Polymerases Using Diffusion-Based Single-Molecule FRET.
J. Hohlbein, A. Kapanidis
2016Methods in Enzymology7 citations Open access
Semantic Scholar
Single-Molecule FRET: Methods and Biological Applications
L. Hwang, J. Hohlbein, Séamus Holden, A. Kapanidis
20097 citations
Semantic Scholar
Substrate conformational dynamics drive structure-specific recognition of gapped DNA by DNA polymerase
Timothy D. Craggs, M. Sustarsic, A. Plochowietz, M. Mosayebi +7 more
2018bioRxiv6 citations Open access
Semantic Scholar
Using single-molecule FRET to probe the nucleotide-dependent conformational landscape of polymerase β-DNA complexes
C. Fijen, M. Mahmoud, M. Kronenberg, R. Kaup +4 more
2020Journal of Biological Chemistry5 citations Open access
Semantic Scholar
Integrating engineered point spread functions into the phasor-based single-molecule localization microscopy framework.
Koen J. A. Martens, Abbas Jabermoradi, Suyeon Yang, J. Hohlbein
2020Methods5 citations Open access
Semantic Scholar
Probing DNA - transcription factor interactions using single-molecule fluorescence detection in nanofluidic devices
Mattia Fontana, Š. Ivanovaitė, S. Lindhoud, E. van der Wijk +4 more
2021bioRxiv4 citations Open access
Semantic Scholar

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