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Khalique Newaz · SciRah

Researcher profile · Semantic Scholar

Khalique Newaz

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Khalique Newaz — researcher profile on SciRah

h-index: 8
Works: 29
Citations: 160

Most-cited papers

GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison
F. E. Faisal, Khalique Newaz, Julie L. Chaney, Jun Li +3 more
2017Scientific Reports37 citations Open access
Semantic Scholar
Network-based protein structural classification
Khalique Newaz, Mahboobeh Ghalehnovi, Arash Rahnama, P. Antsaklis +1 more
2018Royal Society Open Science23 citations Open access
Semantic Scholar
Network analysis of synonymous codon usage
Khalique Newaz, Gabriel Wright, J. Piland, Jun Li +3 more
2019Bioinform.12 citations Open access
Semantic Scholar
Improved supervised prediction of aging-related genes via weighted dynamic network analysis
Qi Li, Khalique Newaz, T. Milenković
2021BMC Bioinformatics11 citations Open access
Semantic Scholar
Reticulated platelets in coronary artery disease: a multidimensional approach unveils prothrombotic signalling and novel therapeutic targets.
K. Kirmes, Jia-Ying Han, M. Klug, C. Bloxham +31 more
2025European Heart Journal10 citations Open access
Semantic Scholar
Identification of Major Signaling Pathways in Prion Disease Progression Using Network Analysis
Khalique Newaz, K. Sriram, Debajyoti Bera
2015PLoS ONE10 citations Open access
Semantic Scholar
Multi-layer sequential network analysis improves protein 3D structural classification
Khalique Newaz, J. Piland, Patricia L. Clark, Scott J. Emrich +2 more
2022Proteins: Structure, Function, and Bioinformatics9 citations Open access
Semantic Scholar
Author Correction: GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison
F. E. Faisal, Khalique Newaz, Julie L. Chaney, Jun Li +3 more
2020Scientific Reports8 citations Open access
Semantic Scholar
Weighted graphlets and deep neural networks for protein structure classification
Hongyu Guo, Khalique Newaz, S. Emrich, T. Milenković +1 more
2019arXiv.org8 citations
Semantic Scholar
Inference of a Dynamic Aging-related Biological Subnetwork via Network Propagation
Khalique Newaz, T. Milenković
2020IEEE/ACM Transactions on Computational Biology & Bioinformatics7 citations Open access
Semantic Scholar
Transcription factor prediction using protein 3D secondary structures
Jeanine Liebold, Fabian Neuhaus, Janina Geiser, Stefan Kurtz +2 more
2024bioRxiv6 citations Open access
Semantic Scholar
GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison
F. E. Faisal, Khalique Newaz, Julie L. Chaney, Jun Li +3 more
2018Annual International Conference on Research in Computational Molecular Biology5 citations
Semantic Scholar
Improving inference of the dynamic biological network underlying aging via network propagation
Khalique Newaz, T. Milenković
20183 citations
Semantic Scholar
Prognostic importance of splicing-triggered aberrations of protein complex interfaces in cancer
Khalique Newaz, C. Schaefers, K. Weisel, Jan Baumbach +1 more
2024bioRxiv2 citations Open access
Semantic Scholar
Towards future directions in data-integrative supervised prediction of human aging-related genes
Qi Li, Khalique Newaz, Tijana Milenkovic
2022Bioinformatics Advances2 citations Open access
Semantic Scholar
The power and limits of predicting inter-protein exon-exon interactions using protein 3D structures
Jeanine Liebold, Aylin del Moral-Morales, K. Manalastas-Cantos, O. Tsoy +3 more
2026Bioinformatics Advances1 citations Open access
Semantic Scholar
Unavailability of experimental 3D structural data on protein folding dynamics and necessity for a new generation of structure prediction methods in this context
Aydin Wells, Khalique Newaz, Jennifer Morones, Jianlin Cheng +1 more
2025Bioinformatics1 citations Open access
Semantic Scholar
The power and limits of predicting exon-exon interactions using protein 3D structures
Jeanine Liebold, Aylin del Moral-Morales, K. Manalastas-Cantos, O. Tsoy +3 more
2024bioRxiv1 citations Open access
Semantic Scholar
Novel Network Science Approaches for a Better Understanding of Protein Folding and Human Aging
Khalique Newaz
20211 citations
Semantic Scholar
Range Extension of the Collared Black-headed Snake, Sibynophis collaris (Gray 1853): A New Record from Southeastern Bangladesh
Sanjoy Biswas Kajol, M. F. Rabbe, Mahfuzur Rahman, Adnan Azad Asif +3 more
2020Reptiles & Amphibians1 citations Open access
Semantic Scholar
Code and data for: Network-based protein structural classification
Khalique Newaz, Mahboobeh Ghalehnovi, Arash Rahnama, P. Antsaklis +1 more
20201 citations
Semantic Scholar
Transcription factor prediction using protein 3D structures
Fabian Neuhaus, Jeanine Liebold, Jan Baumbach, Khalique Newaz
1 citations
Semantic Scholar
Aberrant splicing in human cancer shows possible functional impact on transcription factors
Khalique Newaz, O. Tsoy, Jan Baumbach
2026Oncogene0 citations Open access
Semantic Scholar
Aberrant splicing in human cancer has a large-scale functional impact on transcription factors
Khalique Newaz, O. Tsoy, Jan Baumbach
2025bioRxiv0 citations Open access
Semantic Scholar
Dynamic network analysis improves protein 3D structural classification
Khalique Newaz, J. Piland, Patricia L. Clark, S. Emrich +2 more
20210 citations
Semantic Scholar
Fe b 20 19 Network-based protein structural classification
Khalique Newaz, Arash Rahnama, Mahboobeh Ghalehnovi, P. Antsaklis +1 more
20190 citations
Semantic Scholar
J ul 2 01 9 Network analysis of synonymous codon usage
Khalique Newaz, Gabriel Wright, J. Piland, Jun Li +4 more
20190 citations
Semantic Scholar
Network approach integrates 3D structural and sequence data to improve protein structural comparison
F. E. Faisal, Julie L. Chaney, Khalique Newaz, Jun Li +3 more
20160 citations
Semantic Scholar
Network analysis of prion disease
Khalique Newaz, Debajyoti Bera
20150 citations
Semantic Scholar

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T. Milenković×16
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Patricia L. Clark×8
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Jun Li×7
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F. E. Faisal×4

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