Hongyu Guo

Most-cited papers

Learning from imbalanced data sets with boosting and data generation: the DataBoost-IM approach
Hongyu Guo, H. Viktor
2004SKDD667 citations
Semantic Scholar
Pre-training Molecular Graph Representation with 3D Geometry
Sheng-Chao Liu, Han-Chen Wang, Wei-Yang Liu, Joan Lasenby +2 more
2021International Conference on Learning Representations509 citations
Semantic Scholar
MixUp as Locally Linear Out-Of-Manifold Regularization
Hongyu Guo, Yongyi Mao, Richong Zhang
2018AAAI Conference on Artificial Intelligence360 citations Open access
Semantic Scholar
Long Short-Term Memory Over Recursive Structures
Xiao-Dan Zhu, Parinaz Sobhani, Hongyu Guo
2015International Conference on Machine Learning349 citations
Semantic Scholar
Augmenting Data with Mixup for Sentence Classification: An Empirical Study
Hongyu Guo, Yongyi Mao, Richong Zhang
2019arXiv.org269 citations
Semantic Scholar
Self-supervised Graph-level Representation Learning with Local and Global Structure
Minghao Xu, Hang Wang, Bingbing Ni, Hongyu Guo +1 more
2021International Conference on Machine Learning264 citations
Semantic Scholar
A Graph to Graphs Framework for Retrosynthesis Prediction
Chence Shi, Minkai Xu, Hongyu Guo, Ming Zhang +1 more
2020International Conference on Machine Learning193 citations
Semantic Scholar
Nonlinear Mixup: Out-Of-Manifold Data Augmentation for Text Classification
Hongyu Guo
2020AAAI Conference on Artificial Intelligence126 citations Open access
Semantic Scholar
A text-guided protein design framework
Sheng-Chao Liu, Yan-Jing Li, Zhuoxinran Li, A. Gitter +9 more
2023Nature Machine Intelligence115 citations Open access
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Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching
Sheng-Chao Liu, Hongyu Guo, Jian Tang
2022International Conference on Learning Representations111 citations Open access
Semantic Scholar
scSorter: assigning cells to known cell types according to marker genes
Hongyu Guo, Jun Li
2021Genome Biology106 citations Open access
Semantic Scholar
An Empirical Study on the Effect of Negation Words on Sentiment
Xiao-Dan Zhu, Hongyu Guo, Saif M. Mohammad, S. Kiritchenko
2014Annual Meeting of the Association for Computational Linguistics81 citations Open access
Semantic Scholar
Long Short-Term Memory Over Tree Structures
Xiao-Dan Zhu, Parinaz Sobhani, Hongyu Guo
2015arXiv.org73 citations
Semantic Scholar
The Unreasonable Effectiveness of Word Representations for Twitter Named Entity Recognition
Colin Cherry, Hongyu Guo
2015North American Chapter of the Association for Computational Linguistics61 citations Open access
Semantic Scholar
A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining
Sheng-Chao Liu, Weitao Du, Zhi-Ming Ma, Hongyu Guo +1 more
2023International Conference on Machine Learning54 citations Open access
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Generating Text with Deep Reinforcement Learning
Hongyu Guo
2015arXiv.org51 citations
Semantic Scholar
Syntax Encoding with Application in Authorship Attribution
Richong Zhang, Zhiyuan Hu, Hongyu Guo, Yongyi Mao
2018Conference on Empirical Methods in Natural Language Processing50 citations Open access
Semantic Scholar
ChatGPT-powered Conversational Drug Editing Using Retrieval and Domain Feedback
Sheng-Chao Liu, Jiong-Xiao Wang, Yijin Yang, Chengpeng Wang +3 more
2023arXiv.org49 citations Open access
Semantic Scholar
Multirelational classification: a multiple view approach
Hongyu Guo, H. Viktor
2008Knowledge and Information Systems46 citations
Semantic Scholar
Symmetry-Informed Geometric Representation for Molecules, Proteins, and Crystalline Materials
Sheng-Chao Liu, Weitao Du, Yanjing Li, Zhuoxinran Li +9 more
2023Neural Information Processing Systems43 citations Open access
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DAG-Structured Long Short-Term Memory for Semantic Compositionality
Xiao-Dan Zhu, Parinaz Sobhani, Hongyu Guo
2016North American Chapter of the Association for Computational Linguistics39 citations Open access
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Dynamic Graph Convolutional Networks for Entity Linking
Junshuang Wu, Richong Zhang, Yongyi Mao, Hongyu Guo +2 more
2020The Web Conference37 citations Open access
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Boosting with Data Generation: Improving the Classification of Hard to Learn Examples
Hongyu Guo, H. Viktor
2004International Conference on Industrial, Engineering and Other Applications of Applied Intelligent Systems31 citations
Semantic Scholar
Non-Autoregressive Electron Redistribution Modeling for Reaction Prediction
Hangrui Bi, Heng-Yi Wang, Chence Shi, Connor W. Coley +2 more
2021International Conference on Machine Learning30 citations
Semantic Scholar
ifMixup: Towards Intrusion-Free Graph Mixup for Graph Classiﬁcation
Hongyu Guo, Yongyi Mao
202228 citations
Semantic Scholar
Measuring to Fit: Virtual Tailoring Through Cluster Analysis and Classification
H. Viktor, E. Paquet, Hongyu Guo
2006European Conference on Principles of Data Mining and Knowledge Discovery26 citations Open access
Semantic Scholar
Mining relational databases with multi-view learning
Hongyu Guo, H. Viktor
2005MRDM '0526 citations
Semantic Scholar
MixUp as Directional Adversarial Training
Guillaume P. Archambault, Yongyi Mao, Hongyu Guo, Richong Zhang
2019arXiv.org23 citations
Semantic Scholar
Developing Data-driven Models to Predict BEMS Energy Consumption for Demand Response Systems
Chun-Sheng Yang, S. Létourneau, Hongyu Guo
2014International Conference on Industrial, Engineering and Other Applications of Applied Intelligent Systems22 citations
Semantic Scholar
Accelerated Continuous Conditional Random Fields For Load Forecasting
Hongyu Guo
2015IEEE Transactions on Knowledge and Data Engineering21 citations
Semantic Scholar
Interpolating Graph Pair to Regularize Graph Classification
Hongyu Guo, Yongyi Mao
2021AAAI Conference on Artificial Intelligence18 citations Open access
Semantic Scholar
Representation Based Translation Evaluation Metrics
Boxing Chen, Hongyu Guo
2015Annual Meeting of the Association for Computational Linguistics18 citations Open access
Semantic Scholar
Intrusion-Free Graph Mixup
Hongyu Guo, Yongyi Mao
2021arXiv.org17 citations
Semantic Scholar
Modeling Noisy Hierarchical Types in Fine-Grained Entity Typing: A Content-Based Weighting Approach
Junshuang Wu, Richong Zhang, Yongyi Mao, Hongyu Guo +1 more
2019International Joint Conference on Artificial Intelligence15 citations Open access
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Mining relational data through correlation-based multiple view validation
Hongyu Guo, H. Viktor
2006Knowledge Discovery and Data Mining15 citations
Semantic Scholar
Neural Networks for Integrating Compositional and Non-compositional Sentiment in Sentiment Composition
Xiao-Dan Zhu, Hongyu Guo, Parinaz Sobhani
2015International Workshop on Semantic Evaluation13 citations Open access
Semantic Scholar
Disentangled Wasserstein Autoencoder for T-Cell Receptor Engineering
Tian-Xiao Li, Hongyu Guo, Filippo Grazioli, M. Gerstein +1 more
2022Neural Information Processing Systems12 citations
Semantic Scholar
End-to-End Multi-View Networks for Text Classification
Hongyu Guo, Colin Cherry, Jiang Su
2017arXiv.org12 citations
Semantic Scholar
Uncover the Ground-Truth Relations in Distant Supervision: A Neural Expectation-Maximization Framework
J. Chen, Richong Zhang, Yongyi Mao, Hongyu Guo +1 more
2019Conference on Empirical Methods in Natural Language Processing10 citations Open access
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Exemplar-centered Supervised Shallow Parametric Data Embedding
Martin Renqiang Min, Hongyu Guo, Dong-Jin Song
2017International Joint Conference on Artificial Intelligence10 citations Open access
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NRC: Infused Phrase Vectors for Named Entity Recognition in Twitter
Colin Cherry, Hongyu Guo, Cheng Dai
2015NUT@IJCNLP10 citations Open access
Semantic Scholar
Aggregated Learning: A Vector-Quantization Approach to Learning Neural Network Classifiers
M. Soflaei, Hongyu Guo, Ali Al-Bashabsheh, Yongyi Mao +1 more
2020AAAI Conference on Artificial Intelligence9 citations Open access
Semantic Scholar
A Neural Bag-of-Words Modelling Framework for Link Prediction in Knowledge Bases with Sparse Connectivity
Fan-Shuang Kong, Richong Zhang, Hongyu Guo, Samuel Mensah +2 more
2019The Web Conference9 citations Open access
Semantic Scholar
Data-Driven Modeling for Energy Consumption Estimation
Chun-Sheng Yang, Qiang-Qiang Cheng, Pinhua Lai, Jie Liu +1 more
20189 citations
Semantic Scholar
GraphVF: Controllable Protein-Specific 3D Molecule Generation with Variational Flow
Fangce Sun, Zhihao Zhan, Hongyu Guo, Ming Zhang +1 more
2023arXiv.org8 citations Open access
Semantic Scholar
Class-wise Calibration: A Case Study on COVID-19 Hate Speech
Stephen Obadinma, Hongyu Guo, Xiao-Dan Zhu
2021Canadian AI8 citations Open access
Semantic Scholar
Weighted graphlets and deep neural networks for protein structure classification
Hongyu Guo, Khalique Newaz, S. Emrich, T. Milenković +1 more
2019arXiv.org8 citations
Semantic Scholar
Transductive Relational Classification in the Co-training Paradigm
Michelangelo Ceci, A. Appice, H. Viktor, Donato Malerba +2 more
2012IAPR International Conference on Machine Learning and Data Mining in Pattern Recognition8 citations
Semantic Scholar
Modeling Short-Term Energy Load with Continuous Conditional Random Fields
Hongyu Guo
2013ECML/PKDD7 citations Open access
Semantic Scholar
Human Body Shape Prediction and Analysis Using Predictive Clustering Tree
Peng-Cheng Xi, Hongyu Guo, Chang Shu
2011International Conference on 3D Imaging, Modeling, Processing, Visualization & Transmission7 citations Open access
Semantic Scholar