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Eric L. Van Nostrand · SciRah

Researcher profile · Semantic Scholar

Eric L. Van Nostrand

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Eric L. Van Nostrand — researcher profile on SciRah

h-index: 34
Works: 125
Citations: 9,769

Most-cited papers

Expanded encyclopaedias of DNA elements in the human and mouse genomes
Jill E. Moore, M. Purcaro, Henry E. Pratt, C. Epstein +59 more
2020Nature2,078 citations Open access
Semantic Scholar
A large-scale binding and functional map of human RNA-binding proteins
Eric L. Van Nostrand, Peter Freese, G. Pratt, Xiao-Feng Wang +35 more
2020Nature1,156 citations Open access
Semantic Scholar
Sequence, Structure, and Context Preferences of Human RNA Binding Proteins
Daniel Dominguez, Peter Freese, M. Alexis, Amanda Su +9 more
2017bioRxiv493 citations Open access
Semantic Scholar
Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins
Eric L. Van Nostrand, G. Pratt, Brian A. Yee, Emily C. Wheeler +13 more
2019Genome Biology201 citations Open access
Semantic Scholar
Widespread RNA editing dysregulation in brains from autistic individuals
Stephen S. Tran, Hyun-Ik Jun, J. Bahn, A. Azghadi +11 more
2018Nature Neuroscience196 citations Open access
Semantic Scholar
Protein-RNA networks regulated by normal and ALS-associated mutant HNRNPA2B1 in the nervous system
Fernando J. Martinez, G. Pratt, Eric L. Van Nostrand, Ranjan Batra +23 more
2016Neuron172 citations Open access
Semantic Scholar
Advances and challenges in the detection of transcriptome-wide protein-RNA interactions
Emily C. Wheeler, Eric L. Van Nostrand, Gene W. Yeo
2017Wiley Interdisciplinary Reviews - RNA166 citations Open access
Semantic Scholar
SONAR discovers RNA binding proteins from analysis of large-scale protein-protein interactomes
Kristopher W Brannan, Wenhao Jin, Stephanie C. Huelga, C. A. Banks +8 more
2016Molecules and Cells165 citations Open access
Semantic Scholar
Interaction landscape of inherited polymorphisms with somatic events in cancer
H. Carter, Rachel Marty, Matan Hofree, Andrew M. Gross +12 more
2017Cancer Discovery138 citations Open access
Semantic Scholar
Regulation of RNA editing by RNA-binding proteins in human cells
G. Quinones-Valdez, Stephen S. Tran, Hyun-Ik Jun, J. Bahn +9 more
2019Communications Biology125 citations Open access
Semantic Scholar
Zmat3 is a key splicing regulator in the p53 tumor suppression program
Kathryn T Bieging-Rolett, A. Kaiser, D. Morgens, A. Boutelle +17 more
2020Molecules and Cells92 citations Open access
Semantic Scholar
AMPK regulation of Raptor and TSC2 mediate metformin effects on transcriptional control of anabolism and inflammation
Jeanine L. Van Nostrand, K. Hellberg, E. Luo, Eric L. Van Nostrand +6 more
2020Genes & Development91 citations Open access
Semantic Scholar
Pooled CRISPR screens with imaging on microRaft arrays reveals stress granule-regulatory factors
Emily C. Wheeler, Anthony Q. Vu, J. Einstein, Matthew DiSalvo +6 more
2020Nature Methods88 citations Open access
Semantic Scholar
Biallelic Mutations in the 3’ Exonuclease TOE1 Cause Pontocerebellar Hypoplasia and Uncover a Role in snRNA Processing
Rea M. Lardelli, A. Schaffer, V. Eggens, M. Zaki +55 more
2017Nature Genetics88 citations Open access
Semantic Scholar
Transcriptome-wide identification of RNA-binding protein binding sites using seCLIP-seq
Steven M. Blue, Brian A. Yee, G. Pratt, Jasmine R. Mueller +5 more
2022Nature Protocols79 citations Open access
Semantic Scholar
Robust, cost-effective profiling of RNA binding protein targets with single-end crosslinking and immunoprecipitation (seCLIP)
Eric L. Van Nostrand, Thai B. Nguyen, C. Gelboin-Burkhart, Ruth Wang +4 more
2017Methods in molecular biology75 citations Open access
Semantic Scholar
RBP-Maps enables robust generation of splicing regulatory maps
Brian A. Yee, G. Pratt, B. Graveley, Eric L. Van Nostrand +1 more
2018RNA: A publication of the RNA Society69 citations Open access
Semantic Scholar
An in vivo genome-wide CRISPR screen identifies the RNA-binding protein Staufen2 as a key regulator of myeloid leukemia
Jeevisha Bajaj, Michael Hamilton, Y. Shima, Kendall R. Chambers +14 more
2020Nature Cancer50 citations Open access
Semantic Scholar
Allele-specific binding of RNA-binding proteins reveals functional genetic variants in the RNA
Ei-Wen Yang, J. Bahn, E. Hsiao, B. Tan +13 more
2018Nature Communications50 citations Open access
Semantic Scholar
Scalable and deep profiling of mRNA targets for individual microRNAs with chimeric eCLIP
S. Manakov, Alexander A. Shishkin, Brian A. Yee, Kylie A. Shen +6 more
2022bioRxiv46 citations Open access
Semantic Scholar
Splicing factor SRSF1 deficiency in the liver triggers NASH-like pathology and cell death
W. Arif, Bhoomika Mathur, Michael F. Saikali, U. V. Chembazhi +14 more
2023Nature Communications44 citations Open access
Semantic Scholar
Nol12 is a multifunctional RNA binding protein at the nexus of RNA and DNA metabolism
Daniel D. Scott, Christian Trahan, P. Zindy, L. Aguilar +7 more
2017Nucleic Acids Research44 citations Open access
Semantic Scholar
RNA sequestration in P-bodies sustains myeloid leukemia
Srikanth Kodali, L. Proietti, Gemma Valcárcel, Anna V. López-Rubio +28 more
2024Nature Cell Biology34 citations Open access
Semantic Scholar
ADAR and hnRNPC deficiency synergize in activating endogenous dsRNA-induced type I IFN responses
Anna-Maria Herzner, Zia Khan, Eric L. Van Nostrand, Sara Chan +10 more
2021Journal of Experimental Medicine32 citations Open access
Semantic Scholar
A Large-Scale Binding and Functional Map of Human RNA Binding Proteins
Eric L. Van Nostrand, Peter Freese, G. Pratt, Xiao-feng Wang +34 more
2017bioRxiv31 citations Open access
Semantic Scholar
hnRNPM protects against the dsRNA-mediated interferon response by repressing LINE-associated cryptic splicing
Rong Zheng, Mikayla Dunlap, G. Bobkov, Carlos Gonzalez-Figueroa +14 more
2024Molecules and Cells30 citations Open access
Semantic Scholar
Variation in single-nucleotide sensitivity of eCLIP derived from reverse transcription conditions
Eric L. Van Nostrand, Alexander A. Shishkin, G. Pratt, Thai B. Nguyen +1 more
2017Methods28 citations Open access
Semantic Scholar
A protein-RNA interaction atlas of the ribosome biogenesis factor AATF
Rainer W J Kaiser, Michael Ignarski, Eric L. Van Nostrand, C. Frese +18 more
2019Scientific Reports24 citations Open access
Semantic Scholar
RNA Interacts with Topoisomerase I to Adjust DNA Topology
M. Bhola, Kouki Abe, Paola Orozco, Homa Rahnamoun +11 more
2024Molecules and Cells23 citations Open access
Semantic Scholar
Rewired m6A epitranscriptomic networks link mutant p53 to neoplastic transformation
An Xu, Mo Liu, Mo-Fan Huang, Yang Zhang +29 more
2023Nature Communications23 citations Open access
Semantic Scholar
Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes
Jill E. Moore, M. Purcaro, Henry E. Pratt, C. Epstein +59 more
2022Nature23 citations Open access
Semantic Scholar
exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers
Emily L. LaPlante, Alessandra Stürchler, Robert Fullem, David Chen +26 more
2023Cell Genomics20 citations Open access
Semantic Scholar
Robust, Cost-Effective Profiling of RNA Binding Protein Targets with Single-end Enhanced Crosslinking and Immunoprecipitation (seCLIP) v1
Eric L. Van Nostrand, Thai B. Nguyen, C. Gelboin-Burkhart, Ruth Wang +4 more
2020protocols.io20 citations Open access
Semantic Scholar
Erratum to: Robust, Cost-Effective Profiling of RNA Binding Protein Targets with Single-end Enhanced Crosslinking and Immunoprecipitation (seCLIP).
Eric L. Van Nostrand, Thai B. Nguyen, C. Gelboin-Burkhart, Ruth Wang +4 more
2017Methods in molecular biology17 citations Open access
Semantic Scholar
Experimental and computational considerations in the study of RNA binding protein-RNA interactions
Eric L. Van Nostrand, Stephanie C. Huelga, Gene W. Yeo
2016Advances in Experimental Medicine and Biology16 citations Open access
Semantic Scholar
Identification of the global miR-130a targetome reveals a role for TBL1XR1 in hematopoietic stem cell self-renewal and t(8;21) AML
Gabriela Krivdova, V. Voisin, E. Schoof, Sajid A. Marhon +21 more
2022Cell Reports15 citations Open access
Semantic Scholar
Mapping snoRNA-target RNA interactions in an RNA-binding protein-dependent manner with chimeric eCLIP
Zhuo-Yi Song, Bongmin Bae, Simon Schnabl, Fei Yuan +6 more
2025Genome Biology14 citations Open access
Semantic Scholar
Author Correction: A large-scale binding and functional map of human RNA-binding proteins
Eric L. Van Nostrand, Peter Freese, G. Pratt, Xiao-Feng Wang +35 more
2021Nature14 citations Open access
Semantic Scholar
The IFIT2-IFIT3 antiviral complex targets short 5’ untranslated regions on viral mRNAs for translation inhibition
Dustin R. Glasner, Candace Todd, Brian D. Cook, Agustina D'Urso +20 more
2025Nature Microbiology9 citations Open access
Semantic Scholar
RBP Image Database: A resource for the systematic characterization of the subcellular distribution properties of human RNA binding proteins
Louis-Philip Benoit-Bouvrette, Xiao-feng Wang, J. Boulais, Jian Kong +13 more
2022Nucleic Acids Res.9 citations Open access
Semantic Scholar
Discovery and functional interrogation of SARS-CoV-2 protein-RNA interactions
Joy S. Xiang, Jasmine R. Mueller, E. Luo, Brian A. Yee +25 more
2022bioRxiv4 citations Open access
Semantic Scholar
RNA-binding protein A1CF modulates plasma triglyceride levels through posttranscriptional regulation of stress-induced VLDL secretion
Jennie Lin, D. Conlon, Xiao Wang, Eric L. Van Nostrand +8 more
2018bioRxiv4 citations Open access
Semantic Scholar
Open Problems in Extracellular RNA Data Analysis: Insights From an ERCC Online Workshop
Roger P. Alexander, R. Kitchen, J. Tosar, M. Roth +15 more
2022Frontiers in Genetics3 citations Open access
Semantic Scholar
The cohesin loader NIPBL interacts with pre-ribosomal RNA and treacle to regulate ribosomal RNA synthesis
Xiang-Duo Kong, Yen-yun Chen, Jianhuang Lin, Ebony Flowers +17 more
2019bioRxiv3 citations Open access
Semantic Scholar
Short 5’ UTRs serve as a marker for viral mRNA translation inhibition by the IFIT2-IFIT3 antiviral complex
Dustin R. Glasner, Candace Todd, Brian D. Cook, Agustina D'Urso +18 more
2025bioRxiv2 citations Open access
Semantic Scholar
Discovery and Functional Interrogation of the Virus and Host RNA Interactome of SARS-Cov-2 Proteins
Joy S. Xiang, Jasmine R. Mueller, E. Luo, Brian A. Yee +22 more
2021Social Science Research Network2 citations Open access
Semantic Scholar
Unbiased identification of nanoparticle cell uptake mechanism via a genome-wide CRISPR/Cas9 knockout screen
Eric L. Van Nostrand, Sarah A. Barnhill, Alexander A. Shishkin, David A. Nelles +5 more
2020bioRxiv2 citations Open access
Semantic Scholar
Progress and challenges in profiling protein–RNA and protein-associated RNA–RNA interactions
Zhuo-Yi Song, Eric L. Van Nostrand
2026RNA: A publication of the RNA Society1 citations Open access
Semantic Scholar
Primate lineage specification requires suppression of Alu hyperediting
Emily J. Park, Yingzhi Cui, Florencia Levin-Ferreyra, Víctor López Soriano +16 more
2026bioRxiv1 citations Open access
Semantic Scholar
Multiple Quality Control Checkpoints Safeguard Small Nuclear RNA Biogenesis and Prevent Assembly of Aberrant Spliceosomes
Tiantai Ma, C. Huntington, Zhuo-Yi Song, Rea M. Lardelli +2 more
2025bioRxiv1 citations
Semantic Scholar

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