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Jing Tang · SciRah

Researcher profile · Semantic Scholar

Jing Tang

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Jing Tang — researcher profile on SciRah

h-index: 36
Works: 82
Citations: 6,549

Most-cited papers

Making Sense of Large-Scale Kinase Inhibitor Bioactivity Data Sets: A Comparative and Integrative Analysis
Jing Tang, Agnieszka Szwajda, S. Shakyawar, Tao Xu +3 more
2014Journal of Chemical Information and Modeling657 citations
Semantic Scholar
SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug Combination Screening Datasets
Shuyu Zheng, Wenyu Wang, Jehad Aldahdooh, A. Malyutina +4 more
2022Genomics, Proteomics & Bioinformatics640 citations Open access
Semantic Scholar
SynergyFinder: a web application for analyzing drug combination dose–response matrix data
A. Ianevski, Li-Ye He, T. Aittokallio, Jing Tang
2017Bioinform.518 citations Open access
Semantic Scholar
Network pharmacology applications to map the unexplored target space and therapeutic potential of natural products.
M. Kibble, N. Saarinen, Jing Tang, K. Wennerberg +2 more
2015Natural product reports (Print)403 citations
Semantic Scholar
Chloroplot: An Online Program for the Versatile Plotting of Organelle Genomes
Shuyu Zheng, P. Poczai, J. Hyvönen, Jing Tang +1 more
2020Frontiers in Genetics334 citations Open access
Semantic Scholar
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
M. Menden, Dennis Wang, M. Mason, B. Szalai +350 more
2019Nature Communications321 citations Open access
Semantic Scholar
Corrigendum to “Searching for drug synergy in complex dose–response landscapes using an interaction potency model” [Comput. Struct. Biotechnol. J. 13 (2015) 504–513]
B. Yadav, K. Wennerberg, T. Aittokallio, Jing Tang
2017Computational and Structural Biotechnology Journal287 citations Open access
Semantic Scholar
Bayesian analysis of population structure based on linked molecular information.
J. Corander, Jing Tang
2007Mathematical Biosciences251 citations
Semantic Scholar
What is synergy? The Saariselkä agreement revisited
Jing Tang, K. Wennerberg, T. Aittokallio
2015Frontiers in Pharmacology213 citations Open access
Semantic Scholar
Drug combination sensitivity scoring facilitates the discovery of synergistic and efficacious drug combinations in cancer
A. Malyutina, M. Majumder, Wenyu Wang, A. Pessia +2 more
2019bioRxiv185 citations Open access
Semantic Scholar
Network Pharmacology Strategies Toward Multi-Target Anticancer Therapies: From Computational Models to Experimental Design Principles
Jing Tang, T. Aittokallio
2014Current pharmaceutical design173 citations Open access
Semantic Scholar
DrugComb: an integrative cancer drug combination data portal
B. Zagidullin, Jehad Aldahdooh, Shuyu Zheng, Wenyu Wang +7 more
2019Nucleic Acids Res.171 citations Open access
Semantic Scholar
Drug Target Commons: A Community Effort to Build a Consensus Knowledge Base for Drug-Target Interactions
Jing Tang, Ziaurrehman Tanoli, Balaguru Ravikumar, Zaid Alam +22 more
2017Cell Chemical Biology146 citations Open access
Semantic Scholar
Network-based modeling of herb combinations in traditional Chinese medicine
Yin-Ying Wang, Hongbin Yang, Linxiao Chen, Mohieddin Jafari +1 more
2021bioRxiv137 citations Open access
Semantic Scholar
JAK1/2 and BCL2 inhibitors synergize to counteract bone marrow stromal cell-induced protection of AML.
R. Karjalainen, T. Pemovska, M. Popa, Minxia Liu +18 more
2015Blood129 citations Open access
Semantic Scholar
Identifying Currents in the Gene Pool for Bacterial Populations Using an Integrative Approach
Jing Tang, W. Hanage, C. Fraser, J. Corander
2009PLoS Comput. Biol.117 citations Open access
Semantic Scholar
DrugComb update: a more comprehensive drug sensitivity data repository and analysis portal
Shuyu Zheng, Jehad Aldahdooh, T. Shadbahr, Yin-Yin Wang +4 more
2021bioRxiv113 citations Open access
Semantic Scholar
Prediction of human population responses to toxic compounds by a collaborative competition
F. Eduati, L. Mangravite, Tao Wang, Hao Tang +120 more
2015Nature Biotechnology112 citations Open access
Semantic Scholar
DrugComb - an integrative cancer drug combination data portal
B. Zagidullin, Jehad Aldahdooh, Shuyu Zheng, Wenyu Wang +5 more
2019bioRxiv106 citations Open access
Semantic Scholar
Exploration of databases and methods supporting drug repurposing: a comprehensive survey
Ziaurrehman Tanoli, Umair Seemab, A. Scherer, K. Wennerberg +2 more
2020Briefings Bioinform.105 citations Open access
Semantic Scholar
Target Inhibition Networks: Predicting Selective Combinations of Druggable Targets to Block Cancer Survival Pathways
Jing Tang, Leena Karhinen, Tao Xu, Agnieszka Szwajda +3 more
2013PLoS Comput. Biol.94 citations Open access
Semantic Scholar
Drug synergy of combinatory treatment with remdesivir and the repurposed drugs fluoxetine and itraconazole effectively impairs SARS‐CoV‐2 infection in vitro
S. Schloer, Linda Brunotte, A. Mecate-Zambrano, Shuyu Zheng +3 more
2021British Journal of Pharmacology84 citations Open access
Semantic Scholar
RNA atlas of human bacterial pathogens uncovers stress dynamics linked to infection
K. Avican, Jehad Aldahdooh, Matteo Togninalli, A. K. M. Firoj Mahmud +4 more
2020Nature Communications78 citations Open access
Semantic Scholar
GraphscoreDTA: optimized graph neural network for protein–ligand binding affinity prediction
Kai-Li Wang, Ren-Yi Zhou, Jing Tang, Min Li
2023Bioinform.75 citations Open access
Semantic Scholar
Drug repurposing for COVID-19 using graph neural network and harmonizing multiple evidence
K. Hsieh, Yin-Yin Wang, Luyao Chen, Zhong-Ming Zhao +4 more
2020Scientific Reports74 citations Open access
Semantic Scholar
Drug Target Commons 2.0: a community platform for systematic analysis of drug–target interaction profiles
Ziaurrehman Tanoli, Zaid Alam, M. Vähä-Koskela, Balaguru Ravikumar +5 more
2018Database J. Biol. Databases Curation66 citations Open access
Semantic Scholar
Patient-Customized Drug Combination Prediction and Testing for T-cell Prolymphocytic Leukemia Patients.
Li-Ye He, Jing Tang, E. Andersson, S. Timonen +4 more
2018Cancer Research65 citations Open access
Semantic Scholar
Making Sense of the Epigenome Using Data Integration Approaches
E. Cazaly, J. Saad, Wenyu Wang, C. Heckman +2 more
2019Frontiers in Pharmacology57 citations Open access
Semantic Scholar
Predicting Meridian in Chinese traditional medicine using machine learning approaches
Yin-Yin Wang, Mohieddin Jafari, Yun Tang, Jing Tang
2019bioRxiv55 citations Open access
Semantic Scholar
A Community Challenge for Pancancer Drug Mechanism of Action Inference from Perturbational Profile Data
Eugene Douglass, Robert J. Allaway, B. Szalai, Wenyu Wang +24 more
2020bioRxiv54 citations Open access
Semantic Scholar
Unsupervised Learning and Multipartite Network Models: A Promising Approach for Understanding Traditional Medicine
Mohieddin Jafari, Yin-Yin Wang, A. Amiryousefi, Jing Tang
2020Frontiers in Pharmacology44 citations Open access
Semantic Scholar
Combination Therapy with Fluoxetine and the Nucleoside Analog GS-441524 Exerts Synergistic Antiviral Effects against Different SARS-CoV-2 Variants In Vitro
Linda Brunotte, Shuyu Zheng, A. Mecate-Zambrano, Jing Tang +3 more
2021Pharmaceutics43 citations Open access
Semantic Scholar
DrugRepo: a novel approach to repurposing drugs based on chemical and genomic features
Yin-Yin Wang, Jehad Aldahdooh, Yingying Hu, Hongbin Yang +3 more
2022Scientific Reports41 citations Open access
Semantic Scholar
Determining the Balance Between Drug Efficacy and Safety by the Network and Biological System Profile of Its Therapeutic Target
Xiao-Xu Li, Jia-Yi Yin, Jing Tang, Yinghong Li +8 more
2018Frontiers in Pharmacology39 citations Open access
Semantic Scholar
Drug synergy of combinatory treatment with remdesivir and the repurposed drugs fluoxetine and itraconazole effectively impairs SARS-CoV-2 infection in vitro
S. Schloer, Linda Brunotte, A. Mecate-Zambrano, Shuyu Zheng +3 more
2020bioRxiv38 citations Open access
Semantic Scholar
Loss-of-function mutations with circadian rhythm regulator Per1/Per2 lead to premature ovarian insufficiency
Yating Zheng, Chao Liu, Yan Li, Hai-Juan Jiang +5 more
2018Biology of Reproduction38 citations Open access
Semantic Scholar
Using BERT to identify drug-target interactions from whole PubMed
Jehad Aldahdooh, M. Vähä-Koskela, Jing Tang, Ziaurrehman Tanoli
2021BMC Bioinformatics34 citations Open access
Semantic Scholar
Drug Repurposing for COVID-19 using Graph Neural Network with Genetic, Mechanistic, and Epidemiological Validation
K. Hsieh, Yin-Yin Wang, Luyao Chen, Zhong-Ming Zhao +4 more
2020Research Square33 citations Open access
Semantic Scholar
SynergyFinder: a web application for analyzing drug combination dose–response matrix data
A. Ianevski, Li-Ye He, T. Aittokallio, Jing Tang
2020Bioinform.30 citations Open access
Semantic Scholar
Network pharmacology modeling identifies synergistic Aurora B and ZAK interaction in triple-negative breast cancer
Jing Tang, Prson Gautam, Abhishekh Gupta, Li-Ye He +12 more
2019npj Systems Biology and Applications30 citations Open access
Semantic Scholar
Bipartite network models to design combination therapies in acute myeloid leukaemia
Mohieddin Jafari, M. Mirzaie, Jie Bao, F. Barneh +4 more
2022Nature Communications28 citations Open access
Semantic Scholar
Anti-cancer Drug Synergy Prediction in Understudied Tissues using Transfer Learning
Yejin Kim, Shuyu Zheng, Jing Tang, Wenjin Jim Zheng +2 more
2020bioRxiv26 citations Open access
Semantic Scholar
Multi-parametric single cell evaluation defines distinct drug responses in healthy hematologic cells that are retained in corresponding malignant cell types
M. Majumder, Aino-Maija Leppä, M. Hellesøy, P. Dowling +13 more
2019Haematologica24 citations Open access
Semantic Scholar
Informatics Approaches for Predicting, Understanding, and Testing Cancer Drug Combinations
Jing Tang
2017Methods in molecular biology24 citations
Semantic Scholar
Systematic Mapping of Kinase Addiction Combinations in Breast Cancer Cells by Integrating Drug Sensitivity and Selectivity Profiles.
Agnieszka Szwajda, Prson Gautam, Leena Karhinen, Sawan Kumar Jha +7 more
2015Chemistry and Biology24 citations Open access
Semantic Scholar
Combined gene essentiality scoring improves the prediction of cancer dependency maps
Wenyu Wang, A. Malyutina, A. Pessia, J. Saarela +2 more
2019EBioMedicine21 citations Open access
Semantic Scholar
Landscapes Using an Interaction Potency Model
B. Yadav, K. Wennerberg, T. Aittokallio, Jing Tang
21 citations
Semantic Scholar
A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines
M. Gönen, B. Weir, G. Cowley, F. Vazquez +81 more
2017Cell Systems20 citations Open access
Semantic Scholar
Identification of Celecoxib-Targeted Proteins Using Label-Free Thermal Proteome Profiling on Rat Hippocampus
Elham Gholizadeh, R. Karbalaei, A. Khaleghian, M. Salimi +7 more
2020Molecular Pharmacology19 citations
Semantic Scholar
Network-guided identification of cancer-selective combinatorial therapies in ovarian cancer
Li-Ye He, Daria R Bulanova, J. Oikkonen, Antti Häkkinen +14 more
2021Briefings Bioinform.17 citations Open access
Semantic Scholar

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