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Robert J. Allaway · SciRah

Researcher profile · Semantic Scholar

Robert J. Allaway

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Robert J. Allaway — researcher profile on SciRah

h-index: 13
Works: 42
Citations: 647

Most-cited papers

Machine learning in rare disease
Jineta Banerjee, Jaclyn N. Taroni, Robert J. Allaway, D. V. Prasad +2 more
2023Nature Methods122 citations Open access
Semantic Scholar
Spatiotemporal loss of NF1 in Schwann cell lineage leads to different types of cutaneous neurofibroma susceptible to modification by the Hippo pathway
Zhiguo Chen, Juan Mo, J. Brosseau, T. Shipman +8 more
2018Cancer Discovery77 citations Open access
Semantic Scholar
Crowdsourced mapping of unexplored target space of kinase inhibitors
A. Cichońska, Balaguru Ravikumar, Robert J. Allaway, Fangping Wan +83 more
2020Nature Communications75 citations Open access
Semantic Scholar
A Community Challenge for Pancancer Drug Mechanism of Action Inference from Perturbational Profile Data
Eugene Douglass, Robert J. Allaway, B. Szalai, Wenyu Wang +24 more
2020bioRxiv54 citations Open access
Semantic Scholar
Cutaneous neurofibromas in the genomics era: current understanding and open questions
Robert J. Allaway, Sara J. C. Gosline, S. La Rosa, P. Knight +3 more
2018British Journal of Cancer42 citations Open access
Semantic Scholar
Genomic characterization of patient-derived xenograft models established from fine needle aspirate biopsies of a primary pancreatic ductal adenocarcinoma and from patient-matched metastatic sites
Robert J. Allaway, Dawn A. Fischer, F. B. de Abreu, T. Gardner +18 more
2016OncoTarget42 citations Open access
Semantic Scholar
A clinically and genomically annotated nerve sheath tumor biospecimen repository
K. Pollard, Jineta Banerjee, Xengie Doan, Jia-Wan Wang +13 more
2019Scientific Data33 citations Open access
Semantic Scholar
A machine learning classifier trained on cancer transcriptomes detects NF1 inactivation signal in glioblastoma
G. Way, Robert J. Allaway, S. Bouley, C. Fadul +2 more
2016BMC Genomics33 citations Open access
Semantic Scholar
Traditional and systems biology based drug discovery for the rare tumor syndrome neurofibromatosis type 2
Robert J. Allaway, Steven P. Angus, R. Beauchamp, J. Blakeley +27 more
2018PLoS ONE28 citations Open access
Semantic Scholar
A Crowdsourcing Approach to Develop Machine Learning Models to Quantify Radiographic Joint Damage in Rheumatoid Arthritis
Dong-Mei Sun, T. Nguyen, Robert J. Allaway, Jelai Wang +17 more
2021medRxiv26 citations Open access
Semantic Scholar
Integrative Analysis Identifies Candidate Tumor Microenvironment and Intracellular Signaling Pathways that Define Tumor Heterogeneity in NF1
Jineta Banerjee, Robert J. Allaway, Jaclyn N. Taroni, Aaron Baker +8 more
2020bioRxiv20 citations Open access
Semantic Scholar
Engaging a community to enable disease-centric data sharing with the NF Data Portal
Robert J. Allaway, S. La Rosa, S. Verma, L. Mangravite +4 more
2019Scientific Data16 citations Open access
Semantic Scholar
Gold nanoparticle trafficking of typically excluded compounds across the cell membrane in JB6 Cl 41-5a cells causes assay interference
Athena M. Keene, Robert J. Allaway, N. Sadrieh, Katherine M. Tyner
2011Nanotoxicology15 citations
Semantic Scholar
Crowdsourced identification of multi-target kinase inhibitors for RET- and TAU- based disease: The Multi-Targeting Drug DREAM Challenge
Zhaoping Xiong, Minji Jeon, Robert J. Allaway, Jaewoo Kang +17 more
2021bioRxiv13 citations Open access
Semantic Scholar
Probing the chemical–biological relationship space with the Drug Target Explorer
Robert J. Allaway, S. La Rosa, J. Guinney, Sara J. C. Gosline
2018bioRxiv11 citations Open access
Semantic Scholar
Exploiting mitochondrial and metabolic homeostasis as a vulnerability in NF1 deficient cells
Robert J. Allaway, M. Wood, Sondra L. Downey, S. Bouley +8 more
2017OncoTarget9 citations Open access
Semantic Scholar
Integrated genomic analysis of NF1-associated peripheral nerve sheath tumors: an updated biorepository dataset
Jineta Banerjee, Yang Lyu, Stavriani C. Makri, Alexandra J. Scott +14 more
2025Scientific Data5 citations Open access
Semantic Scholar
Chemical genetic screens reveal defective lysosomal trafficking as synthetic lethal with NF1 loss
S. Bouley, A. Grassetti, Robert J. Allaway, Matthew D. Wood +8 more
2024Journal of Cell Science5 citations Open access
Semantic Scholar
A community challenge for a pancancer drug mechanism of action inference from perturbational profile data
Eugene F. Douglass, Robert J. Allaway, B. Szalai, Wenyu Wang +24 more
2022Cell Reports Medicine5 citations Open access
Semantic Scholar
Integrated genomic analysis of NF1-associated peripheral nerve sheath tumors: an updated biorepository dataset
Jineta Banerjee, Yang Lyu, Stavriani C. Makri, Alexandra J. Scott +13 more
2024bioRxiv4 citations Open access
Semantic Scholar
Immortalization and characterization of Schwann cell lines derived from NF1-associated cutaneous neurofibromas
Hua Li, A. Pemov, Robert J. Allaway, D. Muir +17 more
2025bioRxiv3 citations Open access
Semantic Scholar
BET proteins mediate survival mechanisms in human schwannoma model cells challenged with trametinib but not brigatinib
Haley M. Hardin, Ethan W. Hass, Robert J. Allaway, Helen Morrison +1 more
2025Oncogene3 citations
Semantic Scholar
Translating multi-omics into healthcare: requisites for scalable and equitable implementation
Birutė Tumienė, David R. Adams, Robert J. Allaway, M. J. Barrero +17 more
2026Human Genomics2 citations Open access
Semantic Scholar
Abstract 1: Synapse.org as a foundational platform supporting multicenter cancer data coordination, benchmarking, and broad community reuse.
Adam Taylor, Gaia Andreoletti, Robert J. Allaway, Jineta Banerjee +20 more
2026Cancer Research2 citations
Semantic Scholar
COVID-19 in people with neurofibromatosis 1, neurofibromatosis 2, or schwannomatosis
Jineta Banerjee, J. Friedman, L. Klesse, K. Yohay +4 more
2022medRxiv2 citations Open access
Semantic Scholar
Centralizing neurofibromatosis experimental tool knowledge with the NF Research Tools Database
Ashley Clayton, Mialy M. DeFelice, Brynn Zalmanek, J. Hodgson +14 more
2022Database J. Biol. Databases Curation2 citations Open access
Semantic Scholar
Data and analytical code for in vitro and PDX analysis
C. Greene, B. Kacsoh, Robert J. Allaway
20151 citations
Semantic Scholar
mafsmith: a Rust reimplementation of vcf2maf
Robert J. Allaway
2026bioRxiv0 citations Open access
Semantic Scholar
Ex Vivo Characterization Studies Identify Candidate Therapies for the Individualized Care of NF2-Related Schwannomatosis
Ethan W. Hass, Anna Nagel, Alexandra J. Scott, Robert J. Allaway +13 more
2026Cancers0 citations
Semantic Scholar
Correction: Immortalization and characterization of Schwann cell lines derived from NF1-associated cutaneous neurofibromas
Hua Li, A. Pemov, Robert J. Allaway, D. Muir +17 more
2026PLoS ONE0 citations Open access
Semantic Scholar
Leveraging AI Agents for Efficient Data Annotation
Chang I. Moon, Anh Vu, Alexander Verbitsky, Brian M. Dennis +12 more
2025SWAT4HCLS0 citations
Semantic Scholar
The NIH just released the Draft 2023-2028 Strategic Plan for Data Science. Here are the Benefits, Gaps and Opportunities
Robert J. Allaway, Adam J. Taylor, Anna Greenwood, Jineta Banerjee +4 more
2024Sage Bionetworks0 citations Open access
Semantic Scholar
Abstract LB056: Crowdsourcing rare cancer research in the Hack4NF GENIE-NF tumor identification and classification challenge
Robert J. Allaway, S. Scott, Gabriel Altay, Hariprasad Donthi +8 more
2023Cancer Research0 citations
Semantic Scholar
Extracting insights from scientific publications using large language models
Robert J. Allaway, Julie Bletz
2023Sage Bionetworks0 citations Open access
Semantic Scholar
Abstract 1675: NF Research Tools Database: A knowledge base of experimental research tools for neurofibromatosis
Brynn Zalmanek, J. Goss, Mialy M. DeFelice, Jay Hodgson +13 more
2022Cancer Research0 citations
Semantic Scholar
Three years later: the NF Data Portal in 2021
Robert J. Allaway, Jineta Banerjee, K. Throgmorton, J. Guinney
20210 citations
Semantic Scholar
NF Research Tools Database: An experimental resource database for the neurofibromatosis community
Brynn Zalmanek, Robert J. Allaway, J. Goss, Ashley Clayton +7 more
20210 citations
Semantic Scholar
Abstract B23: A novel model of neurofibroma that deciphers its developmental origin and susceptibility to modification by the Hippo pathway
Zhiguo Chen, Juan Mo, J. Brosseau, T. Shipman +8 more
2020Poster Presentations - Proffered Abstracts0 citations
Semantic Scholar
Walter Brueggemann, A Glad Obedience:
Sue Haslehurst, Robert J. Allaway
20200 citations
Semantic Scholar
DTEN: a network-based workflow to identify drug target networks from gene expression data in rare disease
Sara J. C. Gosline, Robert J. Allaway, J. Guinney
20190 citations Open access
Semantic Scholar
Abstract 4643: Drug-Target Explorer: An interactive tool for examining chemical-biological interactions
Robert J. Allaway, Sara J. C. Gosline, M. Nievo, S. La Rosa +2 more
2018Cancer Chemistry0 citations
Semantic Scholar
2018 AACR Drug Target Explorer
Robert J. Allaway, Sara J. C. Gosline, M. Nievo, S. La Rosa +2 more
20180 citations
Semantic Scholar

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