Skip to content

Home Search Authors Pakistan News Saved

SciRah

SciRah does not host or store research papers. Results come live from free, official scholarly APIs, and every paper links back to its original source.

Data sources

OpenAlex
Semantic Scholar
Crossref
CORE
arXiv
PubMed

Privacy policy Terms of service

E. Denisenko · SciRah

Researcher profile · Semantic Scholar

E. Denisenko

Share profile

E. Denisenko — researcher profile on SciRah

h-index: 12
Works: 24
Citations: 2,285

Most-cited papers

An atlas of human long non-coding RNAs with accurate 5′ ends
C. Hon, Jordan A. Ramilowski, J. Harshbarger, N. Bertin +35 more
2017Nature951 citations Open access
Semantic Scholar
Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows
E. Denisenko, Belinda B. Guo, Matthew G. Jones, Rui Hou +7 more
2020Genome Biology590 citations Open access
Semantic Scholar
Predicting cell-to-cell communication networks using NATMI
Rui Hou, E. Denisenko, Ting-Ong Huan, Jordan A. Ramilowski +1 more
2020Nature Communications281 citations Open access
Semantic Scholar
Spatial transcriptomics reveals discrete tumour microenvironments and autocrine loops within ovarian cancer subclones
E. Denisenko, L. de Kock, Adeline Tan, A. Beasley +18 more
2024Nature Communications145 citations Open access
Semantic Scholar
scMatch: a single-cell gene expression profile annotation tool using reference datasets
Rui Hou, E. Denisenko, A. Forrest
2019Bioinform.108 citations Open access
Semantic Scholar
Single-nucleus RNA sequencing of pre-malignant liver reveals disease-associated hepatocyte state with HCC prognostic potential
R. Carlessi, E. Denisenko, Ebru Boslem, Julia Köhn-Gaone +21 more
2022bioRxiv45 citations Open access
Semantic Scholar
Therapeutic blockade of ER stress and inflammation prevents NASH and progression to HCC
Ebru Boslem, Saskia Reibe, R. Carlessi, B. Smeuninx +19 more
2023Science Advances39 citations Open access
Semantic Scholar
Genome-wide profiling of transcribed enhancers during macrophage activation
E. Denisenko, R. Guler, M. Mhlanga, Harukazu Suzuki +2 more
2017Epigenetics & Chromatin26 citations Open access
Semantic Scholar
Intra- and intertumoral heterogeneity of liver metastases in a patient with uveal melanoma revealed by single-cell RNA sequencing
Wei-Tao Lin, A. Beasley, N. Ardakani, E. Denisenko +6 more
2021Cold Spring Harbor molecular case studies25 citations Open access
Semantic Scholar
Transcriptionally induced enhancers in the macrophage immune response to Mycobacterium tuberculosis infection
E. Denisenko, R. Guler, M. Mhlanga, Harukazu Suzuki +2 more
2018BMC Genomics24 citations Open access
Semantic Scholar
Characterization of the humanized FRG mouse model and development of an AAV-LK03 variant with improved liver lobular biodistribution
Marti Cabanes-Creus, R. G. Navarro, S. H. Liao, S. Scott +11 more
2023Molecular Therapy: Methods & Clinical Development15 citations Open access
Semantic Scholar
IRNdb: the database of immunologically relevant non-coding RNAs
E. Denisenko, D. Ho, O. Tamgue, M. Ozturk +4 more
2016bioRxiv14 citations Open access
Semantic Scholar
Systematic bias assessment in solid tissue 10x scRNA-seq workflows
E. Denisenko, Belinda B. Guo, Matthew G. Jones, Rui Hou +7 more
2019bioRxiv12 citations Open access
Semantic Scholar
Spatial transcriptomics reveals ovarian cancer subclones with distinct tumour microenvironments
E. Denisenko, L. de Kock, Adeline Tan, A. Beasley +14 more
2022bioRxiv8 citations Open access
Semantic Scholar
An Evaluation of Function of Multicopy Noncoding RNAs in Mammals Using ENCODE/FANTOM Data and Comparative Genomics
M. Hoeppner, E. Denisenko, P. Gardner, S. Schmeier +1 more
2018Molecular biology and evolution8 citations Open access
Semantic Scholar
swcarpentry/shell-novice: Software Carpentry: the UNIX shell, June 2019
G. Wilson, G. Capes, Gabriel A. Devenyi, Christina Koch +156 more
20194 citations
Semantic Scholar
Study of the Inhibitory Effect of Antibodies Against C3 Complement Component in a Rat Model of Traumatic Brain Injury
N. Gorbunov, A. Ischenko, A. Zhakhov, A. Trofimov +3 more
2018Российский иммунологический журнал2 citations Open access
Semantic Scholar
Spatial transcriptomics reveals tumour cell-intrinsic and microenvironmental features associated with survival in high-grade serous ovarian carcinoma
Kamran Khan, Wei-Tao Lin, E. Denisenko, Rui Hou +6 more
2026bioRxiv0 citations Open access
Semantic Scholar
Author Correction: Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network
Mathys Grapotte, Manu Saraswat, Chloé Bessière, Christophe Menichelli +485 more
2022Nature Communications0 citations Open access
Semantic Scholar
Some Features Of Russian And Polish Language Picture Of The World
E. Denisenko
20200 citations Open access
Semantic Scholar
Transcriptional regulation in mouse macrophages : the role of enhancers in macrophage activation and infection
E. Denisenko
20180 citations
Semantic Scholar
Development of Immunoadsorbent for C5а Anaphylatoxin Elimination from Blood Plasma of Patients with Complement Hyperactivation-associated Pathologies
E. Denisenko, A. Zhakhov, N. Gorbunov, A. Trofimov +1 more
2018Российский иммунологический журнал0 citations Open access
Semantic Scholar
Genome-wide identification and analysis of transcribed enhancers during macrophage polarization
E. Denisenko, R. Guler, M. Mhlanga, Harukazu Suzuki +2 more
20170 citations Open access
Semantic Scholar
Single-nucleus RNA sequencing of pre-malignant liver reveals Single-nucleus RNA sequencing of pre-malignant liver reveals disease-associated hepatocyte state with HCC prognostic disease-associated hepatocyte state with HCC prognostic potential potential
R. Carlessi, E. Denisenko, Ebru Boslem, Julia Köhn-Gaone +23 more
0 citations
Semantic Scholar

Frequent co-authors

Invite them to SciRah by sharing their profile.

A. Forrest×10
Invite
A. Forrest — researcher profile on SciRah
S. Schmeier×7
Invite
S. Schmeier — researcher profile on SciRah
Rui Hou×7
Invite
Rui Hou — researcher profile on SciRah
Harukazu Suzuki×6
Invite
Harukazu Suzuki — researcher profile on SciRah

×5

Invite

A. Beasley — researcher profile on SciRah

Invite

R. Guler — researcher profile on SciRah

Jordan A. Ramilowski×4

Invite

Jordan A. Ramilowski — researcher profile on SciRah

Invite

T. Lassmann — researcher profile on SciRah

Matthew G. Jones×4

Invite

Matthew G. Jones — researcher profile on SciRah

Invite

L. de Kock — researcher profile on SciRah

Daniel Poppe×4

Invite

Daniel Poppe — researcher profile on SciRah

Alistair R. R. Forrest×4

Invite

Alistair R. R. Forrest — researcher profile on SciRah