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Ziyi Li · SciRah

Researcher profile · Semantic Scholar

Ziyi Li

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Ziyi Li — researcher profile on SciRah

h-index: 18
Works: 36
Citations: 11K

Most-cited papers

Signatures of T cell dysfunction and exclusion predict cancer immunotherapy response
Peng Jiang, Sheng-Qing Gu, D. Pan, Jing-Xin Fu +11 more
2018Nature Medicine4,427 citations Open access
Semantic Scholar
A pan-cancer single-cell transcriptional atlas of tumor infiltrating myeloid cells.
Si Cheng, Ziyi Li, Ran-Ran Gao, B. Xing +16 more
2021Cell1,374 citations Open access
Semantic Scholar
Single-Cell Analyses Inform Mechanisms of Myeloid-Targeted Therapies in Colon Cancer.
Lei Zhang, Ziyi Li, Katarzyna M. Skrzypczynska, Qiao Fang +25 more
2020Cell1,362 citations Open access
Semantic Scholar
TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment
Dong-Qing Sun, Jin Wang, Ya Han, Xin Dong +12 more
2020bioRxiv924 citations Open access
Semantic Scholar
Single-cell and spatial analysis reveal interaction of FAP+ fibroblasts and SPP1+ macrophages in colorectal cancer
Jingjing Qi, Hongxiang Sun, Yao Zhang, Zheng-Ting Wang +17 more
2022Nature Communications863 citations Open access
Semantic Scholar
Integrative analysis of pooled CRISPR genetic screens using MAGeCKFlute
Bin-Bin Wang, Mei Wang, Wubing Zhang, T. Xiao +15 more
2019Nature Protocols413 citations Open access
Semantic Scholar
Single-Cell Sequencing of Peripheral Mononuclear Cells Reveals Distinct Immune Response Landscapes of COVID-19 and Influenza Patients
Linnan Zhu, Peng-Hui Yang, Yingze Zhao, Zhen-Kun Zhuang +40 more
2020Immunity354 citations Open access
Semantic Scholar
Insights Gained from Single-Cell Analysis of Immune Cells in the Tumor Microenvironment.
Xian-Wen Ren, Lei Zhang, Yuan-Yuan Zhang, Ziyi Li +2 more
2021Annual Review of Immunology313 citations
Semantic Scholar
Understanding the Multifaceted Role of Neutrophils in Cancer and Autoimmune Diseases
Xu Wang, Lin Qiu, Ziyi Li, Xiang-Yang Wang +1 more
2018Frontiers in Immunology206 citations Open access
Semantic Scholar
Therapeutically increasing MHC-I expression potentiates immune checkpoint blockade
S. Gu, Wubing Zhang, Xiao-Qing Wang, Peng Jiang +29 more
2021Cancer Discovery193 citations Open access
Semantic Scholar
An entropy-based metric for assessing the purity of single cell populations
Baolin Liu, Chenwei Li, Ziyi Li, Dongfang Wang +2 more
2020Nature Communications185 citations Open access
Semantic Scholar
In Vivo CRISPR Screens Identify E3 Ligase Cop1 as a Modulator of Macrophage Infiltration and Cancer Immunotherapy Target
Xiao-Qing Wang, C. Tokheim, S. Gu, Binbin Wang +18 more
2021Cell180 citations Open access
Semantic Scholar
Integrative analyses of single-cell transcriptome and regulome using MAESTRO
Chenfei Wang, Dong-Qing Sun, Xin Huang, Chang-Xin Wan +12 more
2020Genome Biology180 citations Open access
Semantic Scholar
Single-cell analyses implicate ascites in remodeling the ecosystems of primary and metastatic tumors in ovarian cancer
Xiao-Cui Zheng, Xinjing Wang, Xi Cheng, Zhao-Yuan Liu +9 more
2023Nature Cancer156 citations Open access
Semantic Scholar
Systematic comparative analysis of single-nucleotide variant detection methods from single-cell RNA sequencing data
Fenglin Liu, Yuan-Yuan Zhang, Lei Zhang, Ziyi Li +3 more
2019Genome Biology97 citations Open access
Semantic Scholar
Inhibition of MAN2A1 Enhances the Immune Response to Anti–PD-L1 in Human Tumors
Sailing Shi, Sheng-Qing Gu, T. Han, Wubing Zhang +10 more
2020Clinical Cancer Research48 citations Open access
Semantic Scholar
Tumor stemness score to estimate epithelial-to-mesenchymal transition (EMT) and cancer stem cells (CSCs) characterization and to predict the prognosis and immunotherapy response in bladder urothelial carcinoma
Yanlong Zhang, Xin Zhang, Xue-Feng Huang, Xiaomeng Tang +6 more
2023Stem cell research & therapeutics25 citations Open access
Semantic Scholar
Clonal tracing reveals diverse patterns of response to immune checkpoint blockade
S. Gu, Xiao-Qing Wang, Xi-Hao Hu, Peng Jiang +22 more
2020Genome Biology23 citations Open access
Semantic Scholar
Tertiary lymphoid structure and decreased CD8+ T cell infiltration in minimally invasive adenocarcinoma
Jin Wang, Dong-Bo Jiang, Xiao-Qi Zheng, Wang Li +13 more
2022iScience16 citations Open access
Semantic Scholar
CRISPR Screens Identify Essential Cell Growth Mediators in BRAF Inhibitor-resistant Melanoma
Ziyi Li, Bin-Bin Wang, S. Gu, Peng Jiang +13 more
2020Genomics, Proteomics & Bioinformatics15 citations Open access
Semantic Scholar
Single-Cell Transcriptomics Reveals Killing Mechanisms of Antitumor Cytotoxic CD4+ TCR-T Cells
Yanling Liang, Qumiao Xu, Songming Liu, Jie Li +8 more
2022Frontiers in Immunology14 citations Open access
Semantic Scholar
Integrative analyses of single-cell transcriptome and regulome using MAESTRO
Chenfei Wang, Dong-Qing Sun, Xin Huang, Chang-Xin Wan +12 more
2020Genome Biology10 citations Open access
Semantic Scholar
Abstract B077: Signatures of T-cell dysfunction and exclusion predict cancer immunotherapy response
Peng Jiang, Sheng-Qing Gu, D. Pan, Jing-Xin Fu +11 more
2019Mutational Analysis and Predicting Response to Immunotherapy10 citations
Semantic Scholar
CRISPR Screens Identify Essential Cell Growth Mediators in BRAF-inhibitor Resistant Melanoma
Ziyi Li, Bin-Bin Wang, S. Gu, Peng Jiang +13 more
2019bioRxiv8 citations Open access
Semantic Scholar
Cancer Cell Resistance to IFNγ Can Occur via Enhanced Double-Strand Break Repair Pathway Activity.
T. Han, Xu-Jun Wang, Sailing Shi, Wubing Zhang +9 more
2023Cancer immunology research7 citations Open access
Semantic Scholar
A single-cell approach to engineer CD8+ T cells targeting cytomegalovirus
Fei Wang, Qumiao Xu, Zhen-Kun Zhuang, Ziyi Li +6 more
2020Cellular & Molecular Immunology7 citations Open access
Semantic Scholar
ROGUE: an entropy-based universal metric for assessing the purity of single cell population
Baolin Liu, Chenwei Li, Ziyi Li, Xian-Wen Ren +1 more
2019bioRxiv3 citations Open access
Semantic Scholar
MAESTRO (Model-based AnalysEs of Single-cell Transcriptome and RegulOme)
Chenfei Wang, Dong-Qing Sun, Xin Huang, Chang-Xin Wan +12 more
20202 citations
Semantic Scholar
Single-cell Approach to Generate Functional TCR-Ts: A Potential Accelerator of TCR-T Cell Therapy for Infectious Diseases
Qumiao Xu, Ziyi Li, Fei Wang, Zhen-Kun Zhuang +4 more
2020Journal of cellular immunology1 citations Open access
Semantic Scholar
Clonal tracing reveals diverse patterns of response to immune checkpoint blockade
S. Gu, Xiao-Qing Wang, Xi-Hao Hu, Peng Jiang +22 more
2020Genome Biology1 citations Open access
Semantic Scholar
Tertiary Lymphoid Structure and CD8 T Cell Exclusion in Minimally Invasive Adenocarcinoma
Jin Wang, Dong-Bo Jiang, Xi-Hao Hu, Xiao-Qi Zheng +14 more
2020medRxiv1 citations Open access
Semantic Scholar
Abstract 65: Therapeutically increasing MHC-I expression potentiates immune checkpoint blockade
S. Gu, Wubing Zhang, Xiao-Qing Wang, Peng Jiang +29 more
2021Immunology0 citations
Semantic Scholar
Abstract 6600: Rapid generation of TCR-engineered T lymphocytes by linking the single cell transcriptome to its corresponding T cell receptor in antigen specific T cells
Linnan Zhu, Fei Wang, Qumiao Xu, Haixi Sun +5 more
2020Immunology0 citations
Semantic Scholar
Abstract 3779: Clonal tracing reveals different mechanisms of resistance to immune checkpoint blockade
Sheng-Qing Gu, Xi-Hao Hu, Xiao-Qing Wang, Peng Jiang +7 more
2019Tumor Biology0 citations Open access
Semantic Scholar
Abstract A077: Microenvironmental factors shape resistance patterns to immune checkpoint blockade
Sheng Gu, Xi-Hao Hu, Xiao-Qing Wang, Ziyi Li +6 more
2019Tackling the Tumor Microenvironment: Beyond T-cells0 citations
Semantic Scholar
Abstract A12: Identification of resistance to immune checkpoint blockade
Sheng-Qing Gu, Ziyi Li, Xia Bu, Xiao-Fang Xing +3 more
2018Checkpoints and Immunomodulation0 citations
Semantic Scholar

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