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R. Cronn · SciRah

Researcher profile · Semantic Scholar

R. Cronn

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R. Cronn — researcher profile on SciRah

h-index: 50
Works: 134
Citations: 11K

Most-cited papers

Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics.
S. Straub, M. Parks, K. Weitemier, M. Fishbein +2 more
2012American-Eurasian journal of botany629 citations Open access
Semantic Scholar
Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology
R. Cronn, A. Liston, M. Parks, D. Gernandt +2 more
2008Nucleic Acids Research506 citations Open access
Semantic Scholar
L. A. S. JOHNSON REVIEW No. 2 Use of nuclear genes for phylogeny reconstruction in plants
R. Small, R. Cronn, J. Wendel
2004470 citations
Semantic Scholar
Hyb-Seq: Combining target enrichment and genome skimming for plant phylogenomics
K. Weitemier, S. Straub, R. Cronn, M. Fishbein +3 more
2014Applications in Plant Sciences418 citations Open access
Semantic Scholar
Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
M. Parks, R. Cronn, A. Liston
2009BMC Biology356 citations Open access
Semantic Scholar
Targeted enrichment strategies for next-generation plant biology.
R. Cronn, B. Knaus, A. Liston, P. J. Maughan +3 more
2012American-Eurasian journal of botany219 citations Open access
Semantic Scholar
Fossil calibration of molecular divergence infers a moderate mutation rate and recent radiations for pinus.
A. Willyard, J. Syring, D. Gernandt, A. Liston +1 more
2006Molecular biology and evolution208 citations Open access
Semantic Scholar
Evolution and natural history of the cotton genus.
J. Wendel, C. Brubaker, I. Álvarez, R. Cronn +1 more
2009197 citations
Semantic Scholar
Fragaria: a genus with deep historical roots and ripe for evolutionary and ecological insights.
A. Liston, R. Cronn, T. Ashman
2014American-Eurasian journal of botany177 citations Open access
Semantic Scholar
Widespread genealogical nonmonophyly in species of Pinus subgenus Strobus.
J. Syring, K. Farrell, R. Businský, R. Cronn +1 more
2007Systematic Biology172 citations
Semantic Scholar
Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing.
W. Njuguna, A. Liston, R. Cronn, T. Ashman +1 more
2013Molecular Phylogenetics and Evolution151 citations
Semantic Scholar
Horizontal Transfer of DNA from the Mitochondrial to the Plastid Genome and Its Subsequent Evolution in Milkweeds (Apocynaceae)
S. Straub, R. Cronn, Christopher A. Edwards, M. Fishbein +1 more
2013Genome Biology and Evolution143 citations Open access
Semantic Scholar
Pacific Northwest Forest Tree Seed Zones: A Template for Native Plants?
Randy G. Randy Johnson, F. Sorensen, J. S. St Clair, R. Cronn
2004137 citations Open access
Semantic Scholar
What are the best seed sources for ecosystem restoration on BLM and USFS lands?
Randy Johnson, L. Stritch, P. Olwell, S. Lambert +2 more
2010136 citations
Semantic Scholar
Reticulate evolution and incomplete lineage sorting among the ponderosa pines.
A. Willyard, R. Cronn, A. Liston
2009Molecular Phylogenetics and Evolution133 citations
Semantic Scholar
Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing
S. Straub, M. Fishbein, T. Livshultz, Z. Foster +4 more
2011BMC Genomics127 citations Open access
Semantic Scholar
Functional trait divergence and trait plasticity confer polyploid advantage in heterogeneous environments
Na Wei, R. Cronn, A. Liston, T. Ashman
2018New Phytologist106 citations Open access
Semantic Scholar
Evolutionary relationships among Pinus (Pinaceae) subsections inferred from multiple low-copy nuclear loci.
J. Syring, A. Willyard, R. Cronn, A. Liston
2005American-Eurasian journal of botany103 citations
Semantic Scholar
The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae
D. Neale, P. McGuire, Nicholas C. Wheeler, Kristian Stevens +18 more
2017G3: Genes, Genomes, Genetics101 citations Open access
Semantic Scholar
Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)
M. Parks, R. Cronn, A. Liston
2012BMC Evolutionary Biology101 citations Open access
Semantic Scholar
Finding a (pine) needle in a haystack: chloroplast genome sequence divergence in rare and widespread pines
J. Whittall, J. Syring, M. Parks, Jason D. Buenrostro +3 more
2010Molecular Ecology96 citations Open access
Semantic Scholar
Mitochondrial genome sequences illuminate maternal lineages of conservation concern in a rare carnivore
B. Knaus, R. Cronn, A. Liston, K. Pilgrim +1 more
2011BMC Ecology95 citations Open access
Semantic Scholar
eDNA as a tool for identifying freshwater species in sustainable forestry: A critical review and potential future applications.
A. Coble, C. Flinders, Jessica A. Homyack, Brooke E. Penaluna +2 more
2019Science of the Total Environment92 citations
Semantic Scholar
Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae)
R. Schmickl, A. Liston, Vojtěch Zeisek, K. Oberlander +5 more
2016Molecular Ecology Resources84 citations
Semantic Scholar
A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny.
K. Pham, A. Hipp, P. Manos, R. Cronn
2017Genome77 citations Open access
Semantic Scholar
Interspecific phylogenetic analysis enhances intraspecific phylogeographical inference: a case study in Pinus lambertiana
A. Liston, Mariah Parker-Defeniks, J. Syring, A. Willyard +1 more
2007Molecular Ecology75 citations
Semantic Scholar
Multiplexed microsatellite recovery using massively parallel sequencing
T. Jennings, B. Knaus, T. D. Mullins, S. Haig +1 more
2011Molecular Ecology Resources73 citations
Semantic Scholar
A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation
G. Howe, Jian-Bin Yu, B. Knaus, R. Cronn +4 more
2013BMC Genomics71 citations Open access
Semantic Scholar
Estimating the genetic diversity of Pacific salmon and trout using multigene eDNA metabarcoding
K. Weitemier, Brooke E. Penaluna, L. Hauck, Lucas Longway +2 more
2021Molecular Ecology61 citations Open access
Semantic Scholar
Adventures in the Enormous: A 1.8 Million Clone BAC Library for the 21.7 Gb Genome of Loblolly Pine
Z. Magbanua, Seval Ozkan, B. Bartlett, P. Chouvarine +5 more
2011PLoS ONE60 citations Open access
Semantic Scholar
Transcriptome characterization and polymorphism detection between subspecies of big sagebrush (Artemisia tridentata)
P. Bajgain, B. Richardson, J. C. Price, R. Cronn +1 more
2011BMC Genomics57 citations Open access
Semantic Scholar
Dual RNA-seq of the plant pathogen Phytophthora ramorum and its tanoak host
K. Hayden, M. Garbelotto, B. Knaus, R. Cronn +2 more
2014Tree Genetics & Genomes52 citations Open access
Semantic Scholar
PacBio-Based Mitochondrial Genome Assembly of Leucaena trichandra (Leguminosae) and an Intrageneric Assessment of Mitochondrial RNA Editing
L. Kovar, M. Nageswara-Rao, Sealtiel Ortega-Rodriguez, Diana V. Dugas +9 more
2018Genome Biology and Evolution49 citations Open access
Semantic Scholar
Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)
H. Schroeder, R. Cronn, Y. Yanbaev, T. Jennings +3 more
2016bioRxiv47 citations Open access
Semantic Scholar
Low Diversity in the Mitogenome of Sperm Whales Revealed by Next-Generation Sequencing
A. Alexander, D. Steel, B. Slikas, K. Hoekzema +4 more
2012Genome Biology and Evolution46 citations Open access
Semantic Scholar
Transcriptome of an Armillaria root disease pathogen reveals candidate genes involved in host substrate utilization at the host–pathogen interface
A. Ross-Davis, J. Stewart, J. Hanna, Mee-Sook Kim +6 more
201342 citations
Semantic Scholar
Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles
R. Cronn, Peter C. Dolan, S. Jogdeo, J. Wegrzyn +3 more
2017BMC Genomics40 citations Open access
Semantic Scholar
Source identification of western Oregon Douglas-fir wood cores using mass spectrometry and random forest classification
Kristen N. Finch, E. Espinoza, F. A. Jones, R. Cronn
2017Applications in Plant Sciences40 citations Open access
Semantic Scholar
Phylogeny of the New World diploid cottons (Gossypium L., Malvaceae) based on sequences of three low-copy nuclear genes
Inés Álvarez, R. Cronn, Jonathan F. Wendel
2005Plant Systematics and Evolution39 citations
Semantic Scholar
Targeted Capture Sequencing in Whitebark Pine Reveals Range-Wide Demographic and Adaptive Patterns Despite Challenges of a Large, Repetitive Genome
J. Syring, J. Tennessen, T. Jennings, J. Wegrzyn +2 more
2016Frontiers in Plant Science36 citations Open access
Semantic Scholar
Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing
M. Staton, Teodora Best, Sudhir Khodwekar, Sandra A. Owusu +11 more
2015PLoS ONE33 citations Open access
Semantic Scholar
An Axiom SNP genotyping array for Douglas-fir
G. Howe, K. Jayawickrama, Scott E. Kolpak, J. Kling +7 more
2020BMC Genomics32 citations Open access
Semantic Scholar
Evolution at the tips: Asclepias phylogenomics and new perspectives on leaf surfaces.
M. Fishbein, S. Straub, J. Boutte, K. Hansen +2 more
2018American-Eurasian journal of botany31 citations Open access
Semantic Scholar
Comparative Transcriptomics Among Four White Pine Species
E. Baker, J. Wegrzyn, U. Sezen, T. Falk +15 more
2018G3: Genes, Genomes, Genetics28 citations Open access
Semantic Scholar
Tangled trios?: Characterizing a hybrid zone in Castilleja (Orobanchaceae).
E. Hersch-Green, R. Cronn
2009American-Eurasian journal of botany28 citations
Semantic Scholar
Plastome Structural Evolution and Homoplastic Inversions in Neo-Astragalus (Fabaceae)
J. Charboneau, R. Cronn, A. Liston, M. Wojciechowski +1 more
2021Genome Biology and Evolution26 citations Open access
Semantic Scholar
Predicting the geographic origin of Spanish Cedar (Cedrela odorata L.) based on DNA variation
Kristen N. Finch, R. Cronn, Marianella C. Ayala Richter, C. Blanc-Jolivet +7 more
2019Conservation Genetics25 citations Open access
Semantic Scholar
Creating, curating and evaluating a mitogenomic reference database to improve regional species identification using environmental DNA
Emily Dziedzic, B. Sidlauskas, R. Cronn, James Anthony +6 more
2023Molecular Ecology Resources24 citations Open access
Semantic Scholar
A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae
K. Weitemier, S. Straub, M. Fishbein, C. Bailey +2 more
2019PeerJ24 citations Open access
Semantic Scholar
An empirical evaluation of two-stage species tree inference strategies using a multilocus dataset from North American pines
M. DeGiorgio, J. Syring, A. Eckert, A. Liston +3 more
2014BMC Evolutionary Biology22 citations Open access
Semantic Scholar

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