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M. Parks · SciRah

Researcher profile · Semantic Scholar

M. Parks

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M. Parks — researcher profile on SciRah

h-index: 16
Works: 28
Citations: 2,422

Most-cited papers

Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics.
S. Straub, M. Parks, K. Weitemier, M. Fishbein +2 more
2012American-Eurasian journal of botany629 citations Open access
Semantic Scholar
Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology
R. Cronn, A. Liston, M. Parks, D. Gernandt +2 more
2008Nucleic Acids Research506 citations Open access
Semantic Scholar
Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
M. Parks, R. Cronn, A. Liston
2009BMC Biology356 citations Open access
Semantic Scholar
Targeted enrichment strategies for next-generation plant biology.
R. Cronn, B. Knaus, A. Liston, P. J. Maughan +3 more
2012American-Eurasian journal of botany219 citations Open access
Semantic Scholar
Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing
S. Straub, M. Fishbein, T. Livshultz, Z. Foster +4 more
2011BMC Genomics127 citations Open access
Semantic Scholar
Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)
M. Parks, R. Cronn, A. Liston
2012BMC Evolutionary Biology101 citations Open access
Semantic Scholar
Finding a (pine) needle in a haystack: chloroplast genome sequence divergence in rare and widespread pines
J. Whittall, J. Syring, M. Parks, Jason D. Buenrostro +3 more
2010Molecular Ecology96 citations Open access
Semantic Scholar
Comparison of nuclear, plastid, and mitochondrial phylogenies and the origin of wild octoploid strawberry species.
R. Govindarajulu, M. Parks, J. Tennessen, A. Liston +1 more
2015American-Eurasian journal of botany55 citations Open access
Semantic Scholar
Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta)
M. Parks, Teofil Nakov, E. Ruck, N. Wickett +1 more
2017bioRxiv53 citations Open access
Semantic Scholar
Signal, Uncertainty, and Conflict in Phylogenomic Data for a Diverse Lineage of Microbial Eukaryotes (Diatoms, Bacillariophyta)
M. Parks, N. Wickett, Andrew J. Alverson
2017Molecular biology and evolution47 citations Open access
Semantic Scholar
Low Diversity in the Mitogenome of Sperm Whales Revealed by Next-Generation Sequencing
A. Alexander, D. Steel, B. Slikas, K. Hoekzema +4 more
2012Genome Biology and Evolution46 citations Open access
Semantic Scholar
Bioclimatic, ecological, and phenotypic intermediacy and high genetic admixture in a natural hybrid of octoploid strawberries.
Isabella Salamone, R. Govindarajulu, S. Falk, M. Parks +2 more
2013American-Eurasian journal of botany36 citations Open access
Semantic Scholar
Impacts of low coverage depths and post-mortem DNA damage on variant calling: a simulation study
M. Parks, David M. Lambert
2015BMC Genomics34 citations Open access
Semantic Scholar
Use of the chloroplast gene ycf1 for the genetic differentiation of pine nuts obtained from consumers experiencing dysgeusia.
Sara M. Handy, M. Parks, J. Deeds, A. Liston +7 more
2011Journal of Agricultural and Food Chemistry26 citations
Semantic Scholar
Phylogenetics of extant and fossil Pinaceae: methods for increasing topological stability1
D. Gernandt, Garth Holman, C. Campbell, M. Parks +5 more
201625 citations Open access
Semantic Scholar
Recurrent Loss, Horizontal Transfer, and the Obscure Origins of Mitochondrial Introns in Diatoms (Bacillariophyta)
Wilson X. Guillory, Anastasiia Onyshchenko, E. Ruck, M. Parks +3 more
2018Genome Biology and Evolution23 citations Open access
Semantic Scholar
Newly developed primers for complete ycf1 amplification in Pinus (Pinaceae) chloroplasts with possible family-wide utility.
M. Parks, A. Liston, R. Cronn
2011American-Eurasian journal of botany13 citations Open access
Semantic Scholar
Consistent patterns in 16S and 18S microbial diversity from the shells of the common and widespread red-eared slider turtle (Trachemys scripta)
M. Parks, Cameron Kedy, Casey Skalla
2020PLoS ONE10 citations Open access
Semantic Scholar
Ancient and Modern Genomes Reveal Microsatellites Maintain a Dynamic Equilibrium Through Deep Time
Bennet J. McComish, M. Charleston, M. Parks, C. Baroni +6 more
2020bioRxiv8 citations Open access
Semantic Scholar
The Study of Stream Litter Accumulation as a Model for Cross-Disciplinary, Transformative, Affordable, and Scalable Undergraduate Research Experiences in STEM
M. Parks, Emily P. Hendryx, Andrew T. Taylor
2021Interdisciplinary Journal of Environmental and Science Education7 citations Open access
Semantic Scholar
Draft Genome Assembly of Filamentous Brackish Cyanobacterium Limnoraphis robusta Strain CS-951
A. Willis, M. Parks, M. Burford
2015Genome Announcements5 citations Open access
Semantic Scholar
Plastome phylogenomics in the genus Pinus using massively parallel sequencing technology
M. Parks
20115 citations
Semantic Scholar
Meeting the challenges of non-referenced genome assembly from short-read sequence data.
M. Parks, A. Liston, R. Cronn
20103 citations
Semantic Scholar
Peer Review #2 of "The complete chloroplast genome of Microcycas calocoma (Miq.) A. DC. (Zamiaceae, Cycadales) and evolution in Cycadales (v0.2)"
Aimee Caye, G. Chang, Qiang Lai, Tao Chen +289 more
20200 citations Open access
Semantic Scholar
Peer Review #1 of "Multi-gene incongruence consistent with hybridisation in Cladocopium (Symbiodiniaceae), an ecologically important genus of coral reef symbionts (v0.1)"
J. Brian, S. Davy, S. Wilkinson, B. Baillie +243 more
20190 citations Open access
Semantic Scholar
Peer Review #1 of "A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae (v0.1)"
K. Weitemier, S. Straub, M. Fishbein, Donovan Bailey +496 more
20190 citations Open access
Semantic Scholar
Peer Review #2 of "The use of chloroplast genome sequences to solve phylogenetic incongruences in Polystachya Hook (Orchidaceae Juss) (v0.1)"
Narjara Lopes de Abreu, Ruy Jos, Vlka Alves, Srgio Ricardo +218 more
20180 citations Open access
Semantic Scholar

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