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D. Neale · SciRah

Researcher profile · Semantic Scholar

D. Neale

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D. Neale — researcher profile on SciRah

h-index: 63
Works: 272
Citations: 13K

Most-cited papers

The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols.
P. Martínez-García, M. Crepeau, D. Puiu, D. Gonzalez-Ibeas +20 more
2016The Plant Journal223 citations
Semantic Scholar
Sequence of the Sugar Pine Megagenome
Kristian Stevens, J. Wegrzyn, A. Zimin, D. Puiu +19 more
2016Genetics176 citations Open access
Semantic Scholar
An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing
A. Zimin, Kristian Stevens, M. Crepeau, D. Puiu +5 more
2017GigaScience123 citations Open access
Semantic Scholar
High-quality chromosome-scale assembly of the walnut (Juglans regia L.) reference genome
A. Marrano, Monica Britton, P. A. Zaini, A. Zimin +12 more
2019bioRxiv119 citations Open access
Semantic Scholar
Pseudo-chromosome–length genome assembly of a double haploid “Bartlett” pear (Pyrus communis L.)
G. Linsmith, S. Rombauts, S. Montanari, C. Deng +18 more
2019bioRxiv110 citations Open access
Semantic Scholar
The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae
D. Neale, P. McGuire, Nicholas C. Wheeler, Kristian Stevens +18 more
2017G3: Genes, Genomes, Genetics101 citations Open access
Semantic Scholar
Novel Insights into Tree Biology and Genome Evolution as Revealed Through Genomics.
D. Neale, P. Martínez-García, A. De la Torre, S. Montanari +1 more
2017Annual Review of Plant Biology76 citations Open access
Semantic Scholar
A new genomic tool for walnut (Juglans regia L.): development and validation of the high‐density Axiom™ J. regia 700K SNP genotyping array
A. Marrano, P. Martínez-García, L. Bianco, G. Sideli +7 more
2018Plant Biotechnology Journal75 citations Open access
Semantic Scholar
A Reference Genome Sequence for the European Silver Fir (Abies alba Mill.): A Community-Generated Genomic Resource
E. Mosca, F. Cruz, J. Gómez-Garrido, L. Bianco +28 more
2019G3: Genes, Genomes, Genetics73 citations Open access
Semantic Scholar
Genome-wide patterns of population structure and association mapping of nut-related traits in Persian walnut populations from Iran using the Axiom J. regia 700K SNP array
M. Arab, A. Marrano, R. Abdollahi-Arpanahi, C. Leslie +3 more
2019Scientific Reports73 citations Open access
Semantic Scholar
A Reference Genome Sequence for Giant Sequoia
A. Scott, A. Zimin, D. Puiu, Rachael E. Workman +10 more
2020G372 citations Open access
Semantic Scholar
Water availability drives signatures of local adaptation in whitebark pine (Pinus albicaulis Englm.) across fine spatial scales of the Lake Tahoe Basin, USA
Brandon M. Lind, C. Friedline, J. Wegrzyn, P. Maloney +3 more
2016bioRxiv67 citations Open access
Semantic Scholar
Analysis of the genetic variation in growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa provenances
F. Guerra, J. Richards, O. Fiehn, R. Famula +5 more
2016Tree Genetics & Genomes66 citations
Semantic Scholar
Genomic Variation Among and Within Six Juglans Species
Kristian Stevens, K. Woeste, S. Chakraborty, M. Crepeau +10 more
2018G3: Genes, Genomes, Genetics64 citations Open access
Semantic Scholar
Combining phenotype, genotype and environment to uncover genetic components underlying water use efficiency in Persian walnut.
M. Arab, A. Marrano, R. Abdollahi-Arpanahi, C. Leslie +3 more
2019Journal of Experimental Botany61 citations Open access
Semantic Scholar
Local adaptation at fine spatial scales: an example from sugar pine (Pinus lambertiana, Pinaceae)
A. Eckert, P. Maloney, D. Vogler, C. Jensen +2 more
2015Tree Genetics & Genomes58 citations
Semantic Scholar
Genomic architecture of complex traits in loblolly pine.
A. De la Torre, D. Puiu, M. Crepeau, Kristian Stevens +3 more
2018New Phytologist57 citations
Semantic Scholar
Environmental Genome-Wide Association Reveals Climate Adaptation Is Shaped by Subtle to Moderate Allele Frequency Shifts in Loblolly Pine
A. De la Torre, B. Wilhite, D. Neale
2019Genome Biology and Evolution56 citations Open access
Semantic Scholar
Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization
S. Montanari, L. Bianco, B. Allen, P. Martínez-García +12 more
2019BMC Genomics52 citations Open access
Semantic Scholar
Genomic signatures of different adaptations to environmental stimuli between wild and cultivated Vitis vinifera L
A. Marrano, D. Micheletti, S. Lorenzi, D. Neale +1 more
2018Horticulture Research51 citations Open access
Semantic Scholar
Association and linkage mapping to unravel genetic architecture of phenological traits and lateral bearing in Persian walnut (Juglans regia L.)
A. Bernard, A. Marrano, A. Donkpegan, P. Brown +4 more
2020BMC Genomics49 citations Open access
Semantic Scholar
The Evolution of Forest Genetics and Tree Improvement Research in the United States
N. Wheeler, K. Steiner, S. Schlarbaum, D. Neale
201548 citations
Semantic Scholar
Genome-wide association analysis and pathway enrichment provide insights into the genetic basis of photosynthetic responses to drought stress in Persian walnut
M. Arab, P. Brown, R. Abdollahi-Arpanahi, Seyed Sajad Sohrabi +8 more
2022Horticulture Research46 citations Open access
Semantic Scholar
The Conifers: Genomes, Variation and Evolution
D. Neale, N. Wheeler
2019Cambridge International Law Journal45 citations
Semantic Scholar
Deciphering of the Genetic Control of Phenology, Yield, and Pellicle Color in Persian Walnut (Juglans regia L.)
A. Marrano, G. Sideli, C. Leslie, Hao Cheng +1 more
2019Frontiers in Plant Science44 citations Open access
Semantic Scholar
Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana)
D. Gonzalez-Ibeas, P. Martínez-García, R. Famula, A. Delfino-Mix +5 more
2016G3: Genes, Genomes, Genetics42 citations Open access
Semantic Scholar
Assembled and annotated 26.5 Gbp coast redwood genome: a resource for estimating evolutionary adaptive potential and investigating hexaploid origin
D. Neale, A. Zimin, S. Zaman, A. Scott +12 more
2021G341 citations Open access
Semantic Scholar
Recent landscape genomics studies in forest trees—what can we believe?
Irina Ćalić, F. Bussotti, P. Martínez-García, D. Neale
2016Tree Genetics & Genomes35 citations Open access
Semantic Scholar
Genomic basis of white pine blister rust quantitative disease resistance and its relationship with qualitative resistance
M. Weiss, R. Sniezko, D. Puiu, M. Crepeau +5 more
2020The Plant Journal33 citations Open access
Semantic Scholar
Expression profiling in Pinus radiata infected with Fusarium circinatum
Ángela Carrasco, J. Wegrzyn, Ricardo Durán, Marta Férnandez +4 more
2017Tree Genetics & Genomes33 citations
Semantic Scholar
Climate-related adaptive genetic variation and population structure in natural stands of Norway spruce in the South-Eastern Alps
E. D. Di Pierro, E. Mosca, D. Rocchini, G. Binelli +2 more
2016Tree Genetics & Genomes33 citations
Semantic Scholar
Signatures of local adaptation to climate in natural populations of sweet chestnut (Castanea sativa Mill.) from southern Europe
Simone Castellana, M. A. Martín, A. Solla, F. Alcaide +4 more
2021Annals of Forest Science32 citations Open access
Semantic Scholar
Reconstruction of the Largest Pedigree Network for Pear Cultivars and Evaluation of the Genetic Diversity of the USDA-ARS National Pyrus Collection
S. Montanari, J. Postman, N. Bassil, D. Neale
2020G331 citations Open access
Semantic Scholar
Comparative Genomics of Six Juglans Species Reveals Disease-associated Gene Family Contractions.
Alexander Trouern-Trend, T. Falk, S. Zaman, Madison Caballero +5 more
2019The Plant Journal31 citations Open access
Semantic Scholar
Adaptive variation in natural Alpine populations of Norway spruce (Picea abies [L.] Karst) at regional scale: Landscape features and altitudinal gradient effects
E. D. Di Pierro, E. Mosca, S. González-Martínez, G. Binelli +2 more
201731 citations
Semantic Scholar
Dissecting the Polygenic Basis of Cold Adaptation Using Genome-Wide Association of Traits and Environmental Data in Douglas-fir
A. De la Torre, B. Wilhite, D. Puiu, J. S. St Clair +5 more
2021Genes30 citations Open access
Semantic Scholar
Association genetics of carbon isotope discrimination and leaf morphology in a breeding population of Juglans regia L.
R. Famula, J. Richards, T. Famula, D. Neale
2018Tree Genetics & Genomes30 citations Open access
Semantic Scholar
A new SSR fingerprinting set and its comparison to existing SSR- and SNP-based genotyping platforms to manage Pyrus germplasm resources
Jason D. Zurn, A. Nyberg, S. Montanari, J. Postman +2 more
2020Tree Genetics & Genomes29 citations
Semantic Scholar
Genome-wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia
A. De la Torre, Manoj K. Sekhwal, D. Puiu, S. Salzberg +5 more
2021bioRxiv28 citations Open access
Semantic Scholar
Comparative Transcriptomics Among Four White Pine Species
E. Baker, J. Wegrzyn, U. Sezen, T. Falk +15 more
2018G3: Genes, Genomes, Genetics28 citations Open access
Semantic Scholar
Signatures of natural selection on Pinus cembra and P. mugo along elevational gradients in the Alps
E. Mosca, F. Gugerli, A. Eckert, D. Neale
2016Tree Genetics & Genomes27 citations
Semantic Scholar
Exome resequencing and GWAS for growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa
F. Guerra, H. Suren, J. Holliday, J. Richards +7 more
2019BMC Genomics24 citations Open access
Semantic Scholar
Linking phenotype, genotype and environment to unravel genetic components underlying cold hardiness in coastal Douglas-fir (Pseudotsuga menziesii var. menziesii)
C. Vangestel, A. Eckert, J. Wegrzyn, J. S. St Clair +1 more
2018Tree Genetics & Genomes24 citations
Semantic Scholar
YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut
S. Chakraborty, Monica Britton, J. Wegrzyn, Timothy S. Butterfield +8 more
2015F1000Research24 citations Open access
Semantic Scholar
Quantitative phenotyping of shell suture strength in walnut (Juglans regia L.) enhances precision for detection of QTL and genome-wide association mapping
G. Sideli, A. Marrano, S. Montanari, C. Leslie +4 more
2020PLoS ONE23 citations Open access
Semantic Scholar
Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.)
Irina Ćalić, J. Koch, D. Carey, Charles Addo-Quaye +2 more
2017BMC Genomics23 citations Open access
Semantic Scholar
High rate of adaptive evolution in two widespread European pines
D. Grivet, Komlan Avia, Aleksia Vaattovaara, A. Eckert +3 more
2017Molecular Ecology23 citations Open access
Semantic Scholar
Patterns of neutral and adaptive genetic diversity across the natural range of sugar pine (Pinus lambertiana Dougl.)
C. Vangestel, Alejandra Vázquez-Lobo, P. Martínez-García, Irina Ćalić +2 more
2016Tree Genetics & Genomes20 citations
Semantic Scholar
Environmental effects on fine‐scale spatial genetic structure in four Alpine keystone forest tree species
E. Mosca, E. D. Di Pierro, K. Budde, D. Neale +1 more
2018Molecular Ecology19 citations
Semantic Scholar
Predicting breeding values and genetic components using generalized linear mixed models for categorical and continuous traits in walnut (Juglans regia)
P. Martínez-García, R. Famula, C. Leslie, G. Mcgranahan +2 more
2017Tree Genetics & Genomes18 citations
Semantic Scholar

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