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A. Jakobi · SciRah

Researcher profile · Semantic Scholar

A. Jakobi

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A. Jakobi — researcher profile on SciRah

h-index: 21
Works: 95
Citations: 5,895

Most-cited papers

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1
D. Klionsky, Amal Kamal Abdel-Aziz, Sara Abdelfatah, M. Abdellatif +496 more
2021Autophagy4,016 citations Open access
Semantic Scholar
An atomic model of HIV-1 capsid-SP1 reveals structures regulating assembly and maturation
F. Schur, M. Obr, W. Hagen, W. Wan +5 more
2016Science399 citations
Semantic Scholar
Model-based local density sharpening of cryo-EM maps
A. Jakobi, M. Wilmanns, C. Sachse
2017eLife206 citations Open access
Semantic Scholar
Molecular structures of unbound and transcribing RNA polymerase III
N. Hoffmann, A. Jakobi, M. Moreno-Morcillo, S. Glatt +4 more
2015Nature179 citations Open access
Semantic Scholar
Structural basis of p62/SQSTM1 helical filaments and their role in cellular cargo uptake
A. Jakobi, S. Huber, S. A. Mortensen, S. Schultz +9 more
2020Nature Communications120 citations Open access
Semantic Scholar
Calcium modulates force sensing by the von Willebrand factor A2 domain
A. Jakobi, Alireza Mashaghi, S. Tans, E. Huizinga
2011Nature Communications106 citations Open access
Semantic Scholar
Molecular Structures of Transcribing RNA Polymerase I
L. Tafur, Y. Sadian, N. Hoffmann, A. Jakobi +4 more
2016Molecules and Cells93 citations Open access
Semantic Scholar
Seeing tobacco mosaic virus through direct electron detectors
S. Fromm, T. Bharat, A. Jakobi, W. Hagen +1 more
2015Journal of Structural Biology86 citations Open access
Semantic Scholar
An organized co-assembly of clathrin adaptors is essential for endocytosis.
M. Skruzny, A. Desfosses, S. Prinz, S. Dodonova +11 more
2015Developmental Cell84 citations
Semantic Scholar
Structural insights into transcription initiation by yeast RNA polymerase I
Y. Sadian, L. Tafur, J. Kosiński, A. Jakobi +6 more
2017EMBO Journal63 citations Open access
Semantic Scholar
Characterization of Atg38 and NRBF2, a fifth subunit of the autophagic Vps34/PIK3C3 complex
Y. Ohashi, N. Soler, Miguel García Ortegón, Lu-Fei Zhang +11 more
2016Autophagy63 citations Open access
Semantic Scholar
Cryo-EM structure of gas vesicles for buoyancy-controlled motility
S. Huber, Dion Terwiel, W. Evers, D. Maresca +1 more
2022bioRxiv62 citations Open access
Semantic Scholar
Thresholding of cryo-EM density maps by false discovery rate control
Maximilian Beckers, A. Jakobi, C. Sachse
2018bioRxiv40 citations Open access
Semantic Scholar
Multivalent interactions facilitate motor-dependent protein accumulation at growing microtubule plus-ends
Renu Maan, Louis Reese, Vladimir A. Volkov, Matthew R. King +5 more
2021bioRxiv38 citations Open access
Semantic Scholar
A cryogenic, coincident fluorescence, electron, and ion beam microscope
Daan B. Boltje, J. Hoogenboom, A. Jakobi, G. Jensen +12 more
2022bioRxiv36 citations Open access
Semantic Scholar
Comparing Cryo-EM Reconstructions and Validating Atomic Model Fit Using Difference Maps
A. Joseph, Ingvar C. Lagerstedt, A. Jakobi, T. Burnley +3 more
2020Journal of Chemical Information and Modeling30 citations Open access
Semantic Scholar
Higher‐order assemblies of oligomeric cargo receptor complexes form the membrane scaffold of the Cvt vesicle
C. Bertipaglia, S. Schneider, A. Jakobi, A. Tarafder +10 more
2016EMBO Reports26 citations Open access
Semantic Scholar
Transcribing RNA polymerase III observed by electron cryomicroscopy
N. Hoffmann, A. Jakobi, Matthias K. Vorländer, C. Sachse +1 more
2016The FEBS Journal24 citations Open access
Semantic Scholar
Characterization of the Mycobacterial Acyl-CoA Carboxylase Holo Complexes Reveals Their Functional Expansion into Amino Acid Catabolism
M. Ehebauer, Michael Zimmermann, A. Jakobi, Elke E. E. Noens +9 more
2015PLoS Pathogens24 citations Open access
Semantic Scholar
In cellulo serial crystallography of alcohol oxidase crystals inside yeast cells
A. Jakobi, D. Passon, K. Knoops, F. Stellato +6 more
2016IUCrJ23 citations Open access
Semantic Scholar
Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
S. Spizzichino, Federica Di Fonzo, Chiara Marabelli, A. Tramonti +23 more
2024Molecules and Cells21 citations Open access
Semantic Scholar
Nanofluidic chips for cryo-EM structure determination from picoliter sample volumes
S. Huber, E. Sarajlic, R. Huijink, F. Weis +2 more
2021bioRxiv19 citations Open access
Semantic Scholar
ParaFrag—an approach for surface-based similarity comparison of molecular fragments
A. Jakobi, H. Mauser, T. Clark
2008Journal of Molecular Modeling19 citations
Semantic Scholar
Structural basis of antimicrobial membrane coat assembly by human GBP1
Tanja Kuhm, Clémence Taisne, C. de Agrela Pinto, Luca Gross +6 more
2024Nature Structural & Molecular Biology14 citations Open access
Semantic Scholar
Particle fusion of super-resolution data reveals the unit structure of Nup96 in Nuclear Pore Complex
Wen-Xiu Wang, A. Jakobi, Yu-Le Wu, J. Ries +2 more
2023Scientific Reports13 citations Open access
Semantic Scholar
Electron scattering properties of biological macromolecules and their use for cryo-EM map sharpening
Alok Bharadwaj, A. Jakobi
2022Faraday discussions12 citations Open access
Semantic Scholar
Confidence-guided cryo-EM map optimisation with LocScale-2.0
Alok Bharadwaj, Reinier de Bruin, A. Jakobi
2025bioRxiv9 citations Open access
Semantic Scholar
Robust Local Thickness Estimation of Sub‐Micrometer Specimen by 4D‐STEM
R. Skoupý, Daan B. Boltje, Miroslav Slouf, K. Mrázová +5 more
2023Small Methods9 citations Open access
Semantic Scholar
An integrated fragment based screening approach for the discovery of small molecule modulators of the VWF-GPIbα interaction.
R. Jose, A. Voet, Katleen Broos, A. Jakobi +6 more
2012Chemical Communications8 citations
Semantic Scholar
Enterovirus-like particles encapsidate RNA and exhibit decreased stability due to lack of maturation
Louis Kuijpers, E. Giannopoulou, Yuzhen Feng, Wouter van den Braak +8 more
2025PLoS Pathogens6 citations Open access
Semantic Scholar
Snapshots of Pseudomonas aeruginosa SOS response reveal structural requisites for LexA autoproteolysis
Filippo Vascon, Sofia De Felice, Matteo Gasparotto, Stefan T. Huber +8 more
2025iScience6 citations Open access
Semantic Scholar
Roodmus: a toolkit for benchmarking heterogeneous electron cryo-microscopy reconstructions
Maarten Joosten, Joel Greer, James Parkhurst, T. Burnley +1 more
2024bioRxiv5 citations Open access
Semantic Scholar
A Rapid Cloning Method Employing Orthogonal End Protection
A. Jakobi, E. Huizinga
2012PLoS ONE5 citations Open access
Semantic Scholar
Structural biology of microbial gas vesicles: historical milestones and current knowledge
Stefan T. Huber, A. Jakobi
2024Biochemical Society Transactions4 citations Open access
Semantic Scholar
The guanylate-binding protein GBP1 forms a protein coat that enwraps cytosol-invasive bacteria
A. Jakobi
2024Nature Structural & Molecular Biology4 citations
Semantic Scholar
Thickness and quality controlled fabrication of fluorescence-targeted frozen-hydrated lamellae
Daan B. Boltje, R. Skoupý, Clémence Taisne, Wiel H. Evers +2 more
2024bioRxiv4 citations Open access
Semantic Scholar
Structural basis of membrane targeting and coatomer assembly by human GBP1
Tanja Kuhm, C. de Agrela Pinto, Luca Gross, S. Huber +6 more
2023bioRxiv4 citations Open access
Semantic Scholar
Improvement of Production and Isolation of Human Neuraminidase-1 in Cellulo Crystals.
K. Koiwai, Jun Tsukimoto, T. Higashi, F. Mafuné +21 more
2019ACS Applied Bio Materials4 citations Open access
Semantic Scholar
Structural basis of p62/SQSTM1 helical filaments, their presence in p62 bodies and role in cargo recognition in the cell
A. Jakobi, S. Huber, S. A. Mortensen, S. Schultz +9 more
2019bioRxiv3 citations Open access
Semantic Scholar
Interactive segmentation of membrane and membrane-mimic densities in cryo-EM maps
Alok Bharadwaj, Lotte Veerbeek, A. Jakobi
2026bioRxiv2 citations Open access
Semantic Scholar
Workflow for Fluorescence-Targeted Lamella Milling From Vitrified Cells With a Coincident Fluorescence, Electron, and Ion Beam Microscope
E. Perton, Daan B. Boltje, A. Jakobi, J. Hoogenboom
2025Bio-protocol2 citations Open access
Semantic Scholar
Direct information estimation from cryo-EM Movies with CARYON
K. Ramlaul, Alister Burt, Natàlia de Martín Garrido, J. T. MacDonald +3 more
2020bioRxiv2 citations Open access
Semantic Scholar
Ammonium 2-aminopyrazine-3-carboxylate
M. Lutz, A. Jakobi
2011Acta Crystallographica Section E2 citations Open access
Semantic Scholar
Thickness- and quality-controlled fabrication of fluorescence-targeted frozen-hydrated lamellae
Daan B. Boltje, R. Skoupý, Clémence Taisne, Wiel H. Evers +2 more
2025Cell Reports Methods1 citations Open access
Semantic Scholar
Femtolitre Volume cryoEM Sample Preparation Using a Force‐Sensitive Microfluidic Cantilever
Vijayendra Shastri, Joachim W. Pronk, E. Verlinden, Daniel Torres González +8 more
2025Advanced Materials & Technologies1 citations Open access
Semantic Scholar
Author Correction: Multivalent interactions facilitate motor-dependent protein accumulation at growing microtubule plus-ends
Renu Maan, Louis Reese, Vladimir A. Volkov, Matthew R. King +5 more
2023Nature Cell Biology1 citations Open access
Semantic Scholar
Fluorescence-guided lamella fabrication with ENZEL, an integrated cryogenic CLEM solution for the cryo-electron tomography workflow
C. Jonker, Daan B. Boltje, J. Hoogenboom, A. Jakobi +8 more
2021Microscopy and Microanalysis1 citations Open access
Semantic Scholar
ENZEL - A cryogenic, retrofittable, coincident fluorescence, electron, and ion beam solution for the cryo-electron tomography workflow.
Daan B. Boltje, J. Hoogenboom, A. Jakobi, G. Jensen +8 more
2021Microscopy and Microanalysis1 citations Open access
Semantic Scholar
Iterative model-based density improvement yields better atomic structures from cryo-EM maps
A. Jakobi, M. Wilmanns, C. Sachse
2017bioRxiv1 citations Open access
Semantic Scholar
Novel sequence variation affects GPIb α in post-diarrheal hemolytic uremic syndrome
E. Volokina, A. Jakobi, R. Urbanus, E. Huizinga +6 more
20141 citations Open access
Semantic Scholar

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