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Susmita Shrivastava · SciRah

Researcher profile · Semantic Scholar

Susmita Shrivastava

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Susmita Shrivastava — researcher profile on SciRah

h-index: 20
Works: 30
Citations: 2,119

Most-cited papers

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils
N. Ward, J. Challacombe, P. Janssen, B. Henrissat +42 more
2009Applied and Environmental Microbiology961 citations Open access
Semantic Scholar
Complete Genome Sequence of the N2-Fixing Broad Host Range Endophyte Klebsiella pneumoniae 342 and Virulence Predictions Verified in Mice
D. Fouts, Heather L. Tyler, R. Deboy, S. Daugherty +14 more
2008PLoS Genetics288 citations Open access
Semantic Scholar
Comparative genome analysis of 19 Ureaplasma urealyticum and Ureaplasma parvum strains
V. Paralanov, Jin Lu, L. Duffy, D. Crabb +8 more
2012BMC Microbiology106 citations Open access
Semantic Scholar
Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens
C. Risso, Jun Sun, Kai H. Zhuang, R. Mahadevan +10 more
2009BMC Genomics105 citations Open access
Semantic Scholar
Respiratory Syncytial Virus whole-genome sequencing identifies convergent evolution of sequence duplication in the C-terminus of the G gene
S. Schobel, K. Stucker, M. Moore, L. Anderson +13 more
2016Scientific Reports92 citations Open access
Semantic Scholar
Sequencing and Analysis of Globally Obtained Human Respiratory Syncytial Virus A and B Genomes
Michael E Bose, Jie He, Susmita Shrivastava, M. Nelson +13 more
2015PLoS ONE75 citations Open access
Semantic Scholar
Genomic analysis of a large set of currently—and historically—important human adenovirus pathogens
A. M. Ismail, Tiange Cui, Kalpana Dommaraju, Gurdeep Singh +22 more
2018Emerging Microbes and Infections60 citations Open access
Semantic Scholar
Phylodynamics of Enterovirus A71-Associated Hand, Foot, and Mouth Disease in Viet Nam
J. Geoghegan, L. Tan, D. Kühnert, R. Halpin +28 more
2015Journal of Virology57 citations Open access
Semantic Scholar
Automated degenerate PCR primer design for high-throughput sequencing improves efficiency of viral sequencing
Kelvin Li, Susmita Shrivastava, A. Brownley, Dan Katzel +5 more
2012Virology Journal32 citations Open access
Semantic Scholar
Whole-genome sequencing and analyses identify high genetic heterogeneity, diversity and endemicity of rotavirus genotype P[6] strains circulating in Africa
M. Nyaga, Yi Tan, M. Seheri, R. Halpin +9 more
2018Infection, Genetics and Evolution31 citations Open access
Semantic Scholar
Wild-Type Measles Viruses with Non-Standard Genome Lengths
B. Bankamp, Chunyu Liu, P. Rivailler, J. Bera +4 more
2014PLoS ONE30 citations Open access
Semantic Scholar
Analysis of whole genome sequences of 16 strains of rubella virus from the United States, 1961–2009
E. Abernathy, Min-Hsin Chen, J. Bera, Susmita Shrivastava +4 more
2013Virology Journal30 citations Open access
Semantic Scholar
Isolation, propagation, genome analysis and epidemiology of HKU1 betacoronaviruses.
S. Dominguez, Susmita Shrivastava, Andrew Berglund, Zhaohui Qian +10 more
2014Journal of General Virology28 citations Open access
Semantic Scholar
CharProtDB: a database of experimentally characterized protein annotations
R. Madupu, Alexander R. Richter, R. Dodson, L. Brinkac +5 more
2011Nucleic Acids Res.27 citations Open access
Semantic Scholar
Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop
J. Brister, Yiming Bao, C. Kuiken, E. Lefkowitz +11 more
2010Viruses27 citations Open access
Semantic Scholar
Differing epidemiological dynamics of Chikungunya virus in the Americas during the 2014-2015 epidemic
Yi Tan, B. Pickett, Susmita Shrivastava, L. Gresh +15 more
2018PLoS Neglected Tropical Diseases26 citations Open access
Semantic Scholar
Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains
Susmita Shrivastava, Vinita Puri, Kari A Dilley, Erica Ngouajio +10 more
2018Scientific Reports26 citations Open access
Semantic Scholar
Sequencing and analysis of globally obtained human parainfluenza viruses 1 and 3 genomes
Michael E Bose, Susmita Shrivastava, Jie He, M. Nelson +15 more
2019PLoS ONE23 citations Open access
Semantic Scholar
Isolation and Characterization of a Novel Gammaherpesvirus from a Microbat Cell Line
Reed S Shabman, Susmita Shrivastava, Tshidi Tsibane, Oliver Attie +8 more
2016Msphere20 citations Open access
Semantic Scholar
Pathema: a clade-specific bioinformatics resource center for pathogen research
L. Brinkac, Tanja Davidsen, Erin Beck, A. Ganapathy +23 more
2009Nucleic Acids Res.20 citations Open access
Semantic Scholar
Analysis of whole genome sequences of 16 strains of rubella virus from the United States, 1961–2009
E. Abernathy, Min-Hsin Chen, J. Bera, Susmita Shrivastava +4 more
2013Virology Journal11 citations Open access
Semantic Scholar
Degenerate primer design for highly variable genomes.
Kelvin Li, Susmita Shrivastava, T. Stockwell
2015Methods in molecular biology10 citations
Semantic Scholar
Author Correction: Genomic analysis of a large set of currently—and historically—important human adenovirus pathogens
A. M. Ismail, Tiange Cui, Kalpana Dommaraju, Gurdeep Singh +22 more
2018Emerging Microbes and Infections9 citations Open access
Semantic Scholar
The Protein Naming Utility: a rules database for protein nomenclature
Johannes Goll, R. Montgomery, L. Brinkac, S. Schobel +5 more
2009Nucleic Acids Res.8 citations Open access
Semantic Scholar
Comparative genome analysis of 19 Ureaplasma urealyticum and Ureaplasma parvumstrains
V. Paralanov, Jin Lu, L. Duffy, D. Crabb +8 more
2012BMC Microbiology3 citations Open access
Semantic Scholar
Whole-Genome Sequences of Zika Virus FLR Strains after Passage in Vero or C6/36 Cells
L. Moser, Lauren M. Oldfield, N. Fedorova, Vinita Puri +11 more
2018Genome Announcements2 citations Open access
Semantic Scholar
Identification of Dezidougou Virus in a DAK AR 41524 Zika Virus Stock
Susmita Shrivastava, Vinita Puri, N. Fedorova, P. Amedeo +4 more
2017Genome Announcements2 citations Open access
Semantic Scholar
Sequences of Zika Virus Genomes from a Pediatric Cohort in Nicaragua
Lauren M. Oldfield, N. Fedorova, Vinita Puri, Susmita Shrivastava +12 more
2018Genome Announcements0 citations Open access
Semantic Scholar
Genomic analysis of a large set of currentlyâ€”and historicallyâ€”important human adenovirus pathogens
A. M. Ismail, Tiange Cui, Kalpana Dommaraju, Gurdeep Singh +21 more
20180 citations
Semantic Scholar
Infection of Kp342 and Clinical Strain K. pneumoniae C3091 in Mouse Urinary Tract Infection and Lung Infection Models.
D. Fouts, Heather L. Tyler, R. Deboy, S. Daugherty +14 more
20080 citations Open access
Semantic Scholar

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