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P. Keller · SciRah

Researcher profile · Semantic Scholar

P. Keller

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P. Keller — researcher profile on SciRah

h-index: 44
Works: 90
Citations: 11K

Most-cited papers

Reconstruction of Zebrafish Early Embryonic Development by Scanned Light Sheet Microscopy
P. Keller, Annette D. Schmidt, J. Wittbrodt, E. H. Stelzer
2008Science1,532 citations
Semantic Scholar
Whole-brain functional imaging at cellular resolution using light-sheet microscopy
M. Ahrens, M. Orger, D. Robson, Jennifer M. Li +1 more
2013Nature Methods1,324 citations
Semantic Scholar
Tissue clearing and its applications in neuroscience
H. Ueda, A. Ertürk, Kwanghun Chung, V. Gradinaru +3 more
2020Nature Reviews Neuroscience539 citations Open access
Semantic Scholar
Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy
Raju Tomer, K. Khairy, F. Amat, P. Keller
2012Nature Methods534 citations
Semantic Scholar
Fast high-contrast imaging of animal development with scanned light sheet-based structured illumination microscopy
P. Keller, Annette D. Schmidt, A. Santella, K. Khairy +3 more
2010Nature Methods509 citations Open access
Semantic Scholar
In Toto Imaging and Reconstruction of Post-Implantation Mouse Development at the Single-Cell Level.
K. McDole, L. Guignard, F. Amat, Andrew Berger +5 more
2018Cell480 citations Open access
Semantic Scholar
Light-sheet functional imaging in fictively behaving zebrafish
Nikita Vladimirov, Yu Mu, T. Kawashima, Davis Bennett +5 more
2014Nature Methods341 citations
Semantic Scholar
BigStitcher: reconstructing high-resolution image datasets of cleared and expanded samples
David Hörl, Fabio Rojas Rusak, Friedrich Preusser, Paul W. Tillberg +8 more
2018Nature Methods327 citations Open access
Semantic Scholar
Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data
F. Amat, W. C. Lemon, Daniel P. Mossing, K. McDole +4 more
2014Nature Methods314 citations
Semantic Scholar
Tandem fluorescent protein timers for in vivo analysis of protein dynamics
Anton Khmelinskii, P. Keller, Anna Bartosik, M. Meurer +9 more
2012Nature Biotechnology285 citations
Semantic Scholar
Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms
L. Royer, W. C. Lemon, R. Chhetri, Yinan Wan +3 more
2016Nature Biotechnology265 citations
Semantic Scholar
Visualizing whole-brain activity and development at the single-cell level using light-sheet microscopy.
P. Keller, M. Ahrens
2015Neuron231 citations Open access
Semantic Scholar
Stochastic electrotransport selectively enhances the transport of highly electromobile molecules
Sung-Yon Kim, J. H. Cho, Evan Murray, N. Bakh +8 more
2015Proceedings of the National Academy of Sciences of the United States of America226 citations Open access
Semantic Scholar
Whole-animal functional and developmental imaging with isotropic spatial resolution
R. Chhetri, F. Amat, Yinan Wan, B. Höckendorf +2 more
2015Nature Methods223 citations
Semantic Scholar
Whole-central nervous system functional imaging in larval Drosophila
W. C. Lemon, S. Pulver, B. Höckendorf, K. McDole +3 more
2015Nature Communications203 citations Open access
Semantic Scholar
Imaging Morphogenesis: Technological Advances and Biological Insights
P. Keller
2013Science194 citations
Semantic Scholar
Whole-brain Profiling of Cells and Circuits in Mammals by Tissue Clearing and Light-sheet microscopy
H. Ueda, H. Dodt, P. Osten, M. Economo +2 more
2020Neuron183 citations Open access
Semantic Scholar
Quantitative in vivo imaging of entire embryos with Digital Scanned Laser Light Sheet Fluorescence Microscopy.
P. Keller, E. H. Stelzer
2008Current Opinion in Neurobiology175 citations
Semantic Scholar
Real-Time Three-Dimensional Cell Segmentation in Large-Scale Microscopy Data of Developing Embryos.
J. Stegmaier, F. Amat, W. C. Lemon, K. McDole +4 more
2016Developmental Cell172 citations Open access
Semantic Scholar
Light sheet microscopy of living or cleared specimens.
P. Keller, H. Dodt
2012Current Opinion in Neurobiology163 citations
Semantic Scholar
Characterization of a common progenitor pool of the epicardium and myocardium
R. Tyser, Ximena Ibarra-Soria, K. McDole, S. A. Jayaram +7 more
2021Science143 citations Open access
Semantic Scholar
Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb
Carsten Wolff, J. Tinevez, T. Pietzsch, Evangelia Stamataki +7 more
2018eLife140 citations Open access
Semantic Scholar
Efficient processing and analysis of large-scale light-sheet microscopy data
F. Amat, B. Höckendorf, Yinan Wan, W. C. Lemon +2 more
2015Nature Protocols124 citations
Semantic Scholar
Light-Sheet Microscopy and Its Potential for Understanding Developmental Processes.
Yinan Wan, K. McDole, P. Keller
2019Annual Review of Cell and Developmental Biology121 citations
Semantic Scholar
Life sciences require the third dimension.
P. Keller, F. Pampaloni, E. H. Stelzer
2006Current Opinion in Cell Biology102 citations
Semantic Scholar
Spore number control and breeding in Saccharomyces cerevisiae
Christof Taxis, P. Keller, Zaharoula Kavagiou, L. Jensen +4 more
2005Journal of Cell Biology95 citations Open access
Semantic Scholar
Reconstructing embryonic development
K. Khairy, P. Keller
2011Genesis92 citations Open access
Semantic Scholar
Single-Cell Reconstruction of Emerging Population Activity in an Entire Developing Circuit.
Yinan Wan, Zi-Qiang Wei, L. Looger, Minoru Koyama +2 more
2019Cell87 citations Open access
Semantic Scholar
Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis
Yuko Sato, Lennart Hilbert, Haruka Oda, Yinan Wan +7 more
2019Development83 citations Open access
Semantic Scholar
Live Imaging of Whole Mouse Embryos during Gastrulation: Migration Analyses of Epiblast and Mesodermal Cells
T. Ichikawa, K. Nakazato, P. Keller, H. Kajiura-Kobayashi +3 more
2013PLoS ONE78 citations Open access
Semantic Scholar
Shedding light on the system: studying embryonic development with light sheet microscopy.
Raju Tomer, K. Khairy, P. Keller
2011Current Opinion in Genetics and Development70 citations
Semantic Scholar
In vivo glucose imaging in multiple model organisms with an engineered single-wavelength sensor
J. Keller, J. Marvin, Haluk Lacin, W. C. Lemon +6 more
2019bioRxiv69 citations Open access
Semantic Scholar
Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function
Nikita Vladimirov, Chen Wang, B. Höckendorf, Avinash Pujala +9 more
2018Nature Methods64 citations
Semantic Scholar
Light-sheet imaging for systems neuroscience
P. Keller, M. Ahrens, J. Freeman
2014Nature Methods62 citations
Semantic Scholar
Digital scanned laser light sheet fluorescence microscopy.
P. Keller, E. H. Stelzer
2010Cold Spring Harbor Protocols58 citations
Semantic Scholar
Fast and robust optical flow for time-lapse microscopy using super-voxels
F. Amat, E. Myers, P. Keller
2012Bioinform.55 citations Open access
Semantic Scholar
Digital scanned laser light-sheet fluorescence microscopy (DSLM) of zebrafish and Drosophila embryonic development.
P. Keller, Annette D. Schmidt, Jochen Wittbrodt, E. H. Stelzer
2011Cold Spring Harbor Protocols55 citations
Semantic Scholar
Nlcam modulates midline convergence during anterior neural plate morphogenesis.
K. Brown, P. Keller, M. Ramialison, Martina Rembold +3 more
2010Developmental Biology55 citations Open access
Semantic Scholar
Direct in vivo manipulation and imaging of calcium transients in neutrophils identifies a critical role for leading-edge calcium flux
Rebecca W. Beerman, Molly A. Matty, Gina G. Au, L. Looger +3 more
2015Cell Reports50 citations Open access
Semantic Scholar
In vivo imaging of zebrafish embryogenesis.
P. Keller
2013Methods49 citations Open access
Semantic Scholar
Segregation of yeast nuclear pores
Anton Khmelinskii, P. Keller, H. Lorenz, E. Schiebel +1 more
2010Nature48 citations
Semantic Scholar
Emerging Imaging and Genomic Tools for Developmental Systems Biology.
Zhe J. Liu, P. Keller
2016Developmental Cell47 citations Open access
Semantic Scholar
Repulsive cues combined with physical barriers and cell–cell adhesion determine progenitor cell positioning during organogenesis
Azadeh Paksa, J. Bandemer, Burkhard Hoeckendorf, N. Razin +9 more
2016Nature Communications47 citations Open access
Semantic Scholar
Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations
Caroline Malin-Mayor, Peter Hirsch, L. Guignard, K. McDole +6 more
2021bioRxiv46 citations Open access
Semantic Scholar
Three-dimensional preparation and imaging reveal intrinsic microtubule properties
P. Keller, F. Pampaloni, E. H. Stelzer
2007Nature Methods42 citations
Semantic Scholar
Live imaging and quantitative analysis of gastrulation in mouse embryos using light-sheet microscopy and 3D tracking tools
T. Ichikawa, K. Nakazato, P. Keller, H. Kajiura-Kobayashi +3 more
2014Nature Protocols38 citations
Semantic Scholar
Metabolic regulation of developmental cell cycles and zygotic transcription
N. J. Djabrayan, Celia M. Smits, Matej Krajnc, Tomer Stern +5 more
2019Current Biology37 citations Open access
Semantic Scholar
A practical guide to adaptive light-sheet microscopy
L. Royer, W. C. Lemon, R. Chhetri, P. Keller
2018Nature Protocols37 citations
Semantic Scholar
Towards comprehensive cell lineage reconstructions in complex organisms using light‐sheet microscopy
F. Amat, P. Keller
2013Development, Growth and Differentiation35 citations
Semantic Scholar
Light sheet microscopy in cell biology.
Raju Tomer, K. Khairy, P. Keller
2013Methods in molecular biology32 citations
Semantic Scholar

Frequent co-authors

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W. C. Lemon×10
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W. C. Lemon — researcher profile on SciRah
E. H. Stelzer×9
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Yinan Wan×9
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K. Khairy — researcher profile on SciRah

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L. Looger — researcher profile on SciRah

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J. Freeman — researcher profile on SciRah

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