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C. Desnues · SciRah

Researcher profile · Semantic Scholar

C. Desnues

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C. Desnues — researcher profile on SciRah

h-index: 36
Works: 92
Citations: 7,307

Most-cited papers

Functional metagenomic profiling of nine biomes
E. Dinsdale, R. Edwards, Dana Hall, Florent E. Angly +21 more
2008Nature952 citations
Semantic Scholar
Minimum Information about an Uncultivated Virus Genome (MIUViG)
S. Roux, E. Adriaenssens, B. Dutilh, E. Koonin +57 more
2018Nature Biotechnology689 citations Open access
Semantic Scholar
Metagenomic analysis of stressed coral holobionts.
R. Thurber, Dana Willner-Hall, B. Rodriguez-Mueller, C. Desnues +5 more
2009Environmental Microbiology607 citations
Semantic Scholar
The virophage as a unique parasite of the giant mimivirus
B. La Scola, C. Desnues, Isabelle Pagnier, C. Robert +7 more
2008Nature564 citations
Semantic Scholar
Viral and microbial community dynamics in four aquatic environments
Beltran Rodriguez-Brito, Linlin Li, L. Wegley, Mike Furlan +26 more
2010The ISME Journal427 citations Open access
Semantic Scholar
A global metagenomic map of urban microbiomes and antimicrobial resistance
D. Danko, D. Bezdan, Evan E. Afshin, Sofia Ahsanuddin +95 more
2021Cell307 citations Open access
Semantic Scholar
Biodiversity and biogeography of phages in modern stromatolites and thrombolites
C. Desnues, Beltran Rodriguez-Brito, Steve Rayhawk, S. Kelley +19 more
2008Nature252 citations
Semantic Scholar
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
R. Edwards, A. Vega, H. Norman, M. Ohaeri +113 more
2019Nature Microbiology231 citations Open access
Semantic Scholar
Emergence and Spread of Basal Lineages of Yersinia pestis during the Neolithic Decline.
N. Rascovan, K. Sjögren, K. Kristiansen, R. Nielsen +3 more
2019Cell223 citations Open access
Semantic Scholar
Provirophages and transpovirons as the diverse mobilome of giant viruses
C. Desnues, B. La Scola, N. Yutin, G. Fournous +7 more
2012Proceedings of the National Academy of Sciences of the United States of America217 citations Open access
Semantic Scholar
Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa
Rebecca L. Vega Thurber, K. Barott, Dana Hall, Hong Liu +7 more
2008Proceedings of the National Academy of Sciences of the United States of America215 citations Open access
Semantic Scholar
The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes
Florent E. Angly, D. Willner, Alejandra Prieto-Davó, R. Edwards +24 more
2009PLoS Comput. Biol.210 citations Open access
Semantic Scholar
Pepper Mild Mottle Virus, a Plant Virus Associated with Specific Immune Responses, Fever, Abdominal Pains, and Pruritus in Humans
P. Colson, H. Richet, C. Desnues, Fanny Balique +7 more
2010PLoS ONE193 citations Open access
Semantic Scholar
Mimivirus shows dramatic genome reduction after intraamoebal culture
Mickaël Boyer, Saïd Azza, L. Barrassi, T. Klose +11 more
2011Proceedings of the National Academy of Sciences of the United States of America134 citations Open access
Semantic Scholar
Metagenomics and the Human Virome in Asymptomatic Individuals.
N. Rascovan, Raja Duraisamy, C. Desnues
2016Annual Review of Microbiology128 citations Open access
Semantic Scholar
Viruses in the desert: a metagenomic survey of viral communities in four perennial ponds of the Mauritanian Sahara
L. Fancello, S. Trape, C. Robert, Mickaël Boyer +3 more
2012The ISME Journal109 citations Open access
Semantic Scholar
Hybrid Capture-Based Next Generation Sequencing and Its Application to Human Infectious Diseases
M. Gaudin, C. Desnues
2018Frontiers in Microbiology108 citations Open access
Semantic Scholar
Marseillevirus-like virus recovered from blood donated by asymptomatic humans.
N. Popgeorgiev, Mickaël Boyer, L. Fancello, S. Monteil +7 more
2013Journal of Infectious Diseases98 citations Open access
Semantic Scholar
Evidence of the megavirome in humans.
P. Colson, L. Fancello, Gregory Gimenez, F. Armougom +6 more
2013Journal of Clinical Virology97 citations Open access
Semantic Scholar
Bacteriophages and diffusion of genes encoding antimicrobial resistance in cystic fibrosis sputum microbiota.
L. Fancello, C. Desnues, D. Raoult, J. Rolain
2011Journal of Antimicrobial Chemotherapy90 citations Open access
Semantic Scholar
Seasonal and diel distributions of denitrifying and bacterial communities in a hypersaline microbial mat (Camargue, France).
C. Desnues, V. Michotey, A. Wieland, Zhizang Cui +3 more
2007Water Research89 citations
Semantic Scholar
Computational tools for viral metagenomics and their application in clinical research
L. Fancello, D. Raoult, C. Desnues
2012Virology71 citations Open access
Semantic Scholar
Viral Metagenomics on Animals as a Tool for the Detection of Zoonoses Prior to Human Infection?
S. Temmam, B. Davoust, J. Bérenger, D. Raoult +1 more
2014International Journal of Molecular Sciences70 citations Open access
Semantic Scholar
Sputnik, a virophage infecting the viral domain of life.
C. Desnues, Mickaël Boyer, D. Raoult
2012Advances in Virus Research66 citations
Semantic Scholar
Bacteriophages as vehicles of the resistome in cystic fibrosis.
J. Rolain, L. Fancello, C. Desnues, D. Raoult
2011Journal of Antimicrobial Chemotherapy65 citations Open access
Semantic Scholar
Describing the Silent Human Virome with an Emphasis on Giant Viruses
N. Popgeorgiev, S. Temmam, D. Raoult, C. Desnues
2013Intervirology58 citations Open access
Semantic Scholar
COVID-19 drug practices risk antimicrobial resistance evolution
Ebrahim Afshinnekoo, Chandrima Bhattacharya, A. Burguete-García, E. Castro-Nallar +17 more
2021The Lancet Microbe51 citations Open access
Semantic Scholar
Viruses in a 14th-Century Coprolite
S. Appelt, L. Fancello, M. Le Bailly, D. Raoult +2 more
2014Applied and Environmental Microbiology49 citations Open access
Semantic Scholar
Therapeutic Potential of a New Jumbo Phage That Infects Vibrio coralliilyticus, a Widespread Coral Pathogen
L. Jacquemot, Y. Bettarel, Joanne Monjol, E. Corre +5 more
2018Frontiers in Microbiology47 citations Open access
Semantic Scholar
Marseillevirus Adenitis in an 11-Month-Old Child
N. Popgeorgiev, G. Michel, H. Lepidi, D. Raoult +1 more
2013Journal of Clinical Microbiology46 citations Open access
Semantic Scholar
Characterization of Viral Communities of Biting Midges and Identification of Novel Thogotovirus Species and Rhabdovirus Genus
S. Temmam, Sonia Monteil-Bouchard, C. Robert, J. Baudoin +6 more
2016Viruses45 citations Open access
Semantic Scholar
Marseillevirus prevalence in multitransfused patients suggests blood transmission.
N. Popgeorgiev, P. Colson, I. Thuret, Jacques Chiarioni +3 more
2013Journal of Clinical Virology44 citations
Semantic Scholar
Oyster hemolymph is a complex and dynamic ecosystem hosting bacteria, protists and viruses
S. Dupont, A. Lokmer, E. Corre, J. Auguet +14 more
2019Animal Microbiome43 citations Open access
Semantic Scholar
High occurrence of viruses in the mucus layer of scleractinian corals.
H. Nguyen-Kim, T. Bouvier, C. Bouvier, H. Doan-Nhu +7 more
2014Environmental Microbiology Reports39 citations
Semantic Scholar
Novel Single-Stranded DNA Circular Viruses in Pericardial Fluid of Patient with Recurrent Pericarditis
S. Halary, Raja Duraisamy, L. Fancello, Sonia Monteil-Bouchard +5 more
2016Emerging Infectious Diseases37 citations Open access
Semantic Scholar
Human Polyomavirus-6 Infecting Lymph Nodes of a Patient With an Angiolymphoid Hyperplasia With Eosinophilia or Kimura Disease.
N. Rascovan, Sonia Monteil Bouchard, J. Grob, A. Collet-Villette +5 more
2016Clinical Infectious Diseases37 citations
Semantic Scholar
Global Genetic Cartography of Urban Metagenomes and Anti-Microbial Resistance
D. Danko, D. Bezdan, Ebrahim Afshinnekoo, Sofia Ahsanuddin +93 more
2019bioRxiv33 citations Open access
Semantic Scholar
Host-Associated Metagenomics: A Guide to Generating Infectious RNA Viromes
S. Temmam, Sonia Monteil-Bouchard, C. Robert, Hervé Pascalis +5 more
2015PLoS ONE33 citations Open access
Semantic Scholar
Virophages question the existence of satellites
C. Desnues, D. Raoult
2012Nature Reviews Microbiology33 citations
Semantic Scholar
Detection of novel RNA viruses from free-living gorillas, Republic of the Congo: genetic diversity of picobirnaviruses
Raja Duraisamy, J. Akiana, B. Davoust, O. Mediannikov +6 more
2018Virus genes32 citations Open access
Semantic Scholar
Viral metagenomics: are we missing the giants?
S. Halary, S. Temmam, D. Raoult, C. Desnues
2016Current Opinion in Microbiology31 citations
Semantic Scholar
Virome Diversity among Mosquito Populations in a Sub-Urban Region of Marseille, France
Amira Nebbak, Sonia Monteil-Bouchard, J. Bérenger, L. Almeras +2 more
2021Viruses28 citations Open access
Semantic Scholar
Exploring divergent antibiotic resistance genes in ancient metagenomes and discovery of a novel beta-lactamase family.
N. Rascovan, A. Telke, D. Raoult, J. Rolain +1 more
2016Environmental Microbiology Reports28 citations
Semantic Scholar
A history of the MetaSUB consortium: Tracking urban microbes around the globe
Krista A. Ryon, Braden T. Tierney, A. Frolova, A. Kahles +30 more
2022iScience27 citations Open access
Semantic Scholar
Faustovirus-Like Asfarvirus in Hematophagous Biting Midges and Their Vertebrate Hosts
S. Temmam, Sonia Monteil-Bouchard, Masse Sambou, M. Aubadie-Ladrix +10 more
2015Frontiers in Microbiology27 citations Open access
Semantic Scholar
Functional metagenomic profiling of nine biomes
E. Dinsdale, R. Edwards, Dana Hall, Florent E. Angly +21 more
2008Nature27 citations Open access
Semantic Scholar
Viral Communities Associated with Human Pericardial Fluids in Idiopathic Pericarditis
L. Fancello, S. Monteil, N. Popgeorgiev, R. Rivet +4 more
2014PLoS ONE26 citations Open access
Semantic Scholar
Acanthamoeba polyphaga mimivirus Virophage Seroconversion in Travelers Returning from Laos
P. Parola, A. Renvoisé, E. Botelho-Nevers, B. La Scola +2 more
2012Emerging Infectious Diseases25 citations Open access
Semantic Scholar
Screening for Viral Pathogens in African Simian Bushmeat Seized at A French Airport
S. Temmam, B. Davoust, A. Chaber, Y. Lignereux +4 more
2016Transboundary and Emerging Diseases24 citations Open access
Semantic Scholar
Development and validation of a multiplex qPCR assay for detection and relative quantification of HPV16 and HPV18 E6 and E7 oncogenes
A. Bordigoni, A. Motte, H. Tissot-Dupont, P. Colson +1 more
2021Scientific Reports23 citations Open access
Semantic Scholar

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Florent E. Angly

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