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E. Dinsdale · SciRah

Researcher profile · Semantic Scholar

E. Dinsdale

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E. Dinsdale — researcher profile on SciRah

h-index: 46
Works: 129
Citations: 12K

Most-cited papers

A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
B. Dutilh, Noriko Cassman, K. McNair, S. Sanchez +10 more
2014Nature Communications725 citations Open access
Semantic Scholar
Lytic to temperate switching of viral communities
B. Knowles, C. Silveira, B. Bailey, K. Barott +39 more
2016Nature589 citations Open access
Semantic Scholar
Viral and microbial community dynamics in four aquatic environments
Beltran Rodriguez-Brito, Linlin Li, L. Wegley, Mike Furlan +26 more
2010The ISME Journal427 citations Open access
Semantic Scholar
PHANOTATE: a novel approach to gene identification in phage genomes
K. McNair, Carol L. Ecale Zhou, E. Dinsdale, B. Souza +1 more
2019Bioinform.301 citations Open access
Semantic Scholar
Global microbialization of coral reefs
A. Haas, M. F. Fairoz, L. W. Kelly, Craig E. Nelson +15 more
2016Nature Microbiology294 citations
Semantic Scholar
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
R. Edwards, A. Vega, H. Norman, M. Ohaeri +113 more
2019Nature Microbiology231 citations Open access
Semantic Scholar
Do the organic sulfur compounds DMSP and DMS drive coral microbial associations?
J. Raina, E. Dinsdale, B. Willis, D. Bourne
2010Trends in Microbiology229 citations
Semantic Scholar
Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors
L. W. Kelly, Gareth J. Williams, K. Barott, C. Carlson +13 more
2014Proceedings of the National Academy of Sciences of the United States of America209 citations Open access
Semantic Scholar
Abrolhos Bank Reef Health Evaluated by Means of Water Quality, Microbial Diversity, Benthic Cover, and Fish Biomass Data
Thiago Bruce, P. Meirelles, G. Garcia, R. Paranhos +11 more
2012PLoS ONE133 citations Open access
Semantic Scholar
Metagenomic Insights into Anaerobic Metabolism along an Arctic Peat Soil Profile
D. Lipson, J. M. Haggerty, A. Srinivas, T. Raab +2 more
2013PLoS ONE127 citations Open access
Semantic Scholar
Elevated temperature drives kelp microbiome dysbiosis, while elevated carbon dioxide induces water microbiome disruption
J. Minich, Megan M. Morris, Matt Brown, M. Doane +3 more
2018PLoS ONE123 citations Open access
Semantic Scholar
Bioinformatics core competencies for undergraduate life sciences education
M. Wilson Sayres, C. Hauser, M. Sierk, S. Robic +30 more
2017bioRxiv116 citations Open access
Semantic Scholar
Microbial processes driving coral reef organic carbon flow
C. Silveira, G. Cavalcanti, Juline M. Walter, A. W. Silva-Lima +4 more
2017FEMS Microbiology Reviews92 citations Open access
Semantic Scholar
Assembly rules of reef corals are flexible along a steep climatic gradient.
T. Hughes, A. Baird, E. Dinsdale, N. Moltschaniwskyj +3 more
2012Current Biology91 citations Open access
Semantic Scholar
Combining de novo and reference-guided assembly with scaffold_builder
G. Silva, B. Dutilh, T. D. Matthews, Keri Elkins +3 more
2013Source Code for Biology and Medicine88 citations Open access
Semantic Scholar
Microbial abundance, composition, and function in nectar are shaped by flower visitor identity.
Megan M. Morris, Natalie J Frixione, Alexander Burkert, E. Dinsdale +1 more
2020FEMS Microbiology Ecology84 citations Open access
Semantic Scholar
Barriers to integration of bioinformatics into undergraduate life sciences education: A national study of US life sciences faculty uncover significant barriers to integrating bioinformatics into undergraduate instruction
Jason J. Williams, Jennifer C. Drew, S. Galindo-Gonzalez, S. Robic +26 more
2019PLoS ONE83 citations Open access
Semantic Scholar
Oxygen minimum zones harbour novel viral communities with low diversity.
Noriko Cassman, Alejandra Prieto-Davó, Kevin Walsh, G. G. Z. Silva +13 more
2012Environmental Microbiology83 citations
Semantic Scholar
Modeling of the Coral Microbiome: the Influence of Temperature and Microbial Network
L. Lima, Maya Weissman, Micheal B. Reed, B. Papudeshi +6 more
2020mBio65 citations Open access
Semantic Scholar
‘Genome skimming’ with the MinION hand-held sequencer identifies CITES-listed shark species in India’s exports market
S. Johri, Jitesh B. Solanki, V. A. Cantu, Sam R. Fellows +4 more
2019Scientific Reports63 citations Open access
Semantic Scholar
The skin microbiome of elasmobranchs follows phylosymbiosis, but in teleost fishes, the microbiomes converge
M. Doane, Megan M. Morris, B. Papudeshi, Lauren Allen +33 more
2019Microbiome62 citations Open access
Semantic Scholar
Baseline Assessment of Mesophotic Reefs of the Vitória-Trindade Seamount Chain Based on Water Quality, Microbial Diversity, Benthic Cover and Fish Biomass Data
P. Meirelles, G. Amado-Filho, G. H. Pereira-Filho, H. Pinheiro +17 more
2015PLoS ONE62 citations Open access
Semantic Scholar
Black reefs: iron-induced phase shifts on coral reefs
L. W. Kelly, K. Barott, E. Dinsdale, A. Friedlander +9 more
2012The ISME Journal62 citations Open access
Semantic Scholar
Black reefs: iron-induced phase shifts on coral reefs
L. W. Kelly, K. Barott, E. Dinsdale, A. Friedlander +9 more
2011The ISME Journal62 citations Open access
Semantic Scholar
Distinct biogeographical patterns of marine bacterial taxonomy and functional genes
J. M. Haggerty, E. Dinsdale
201761 citations Open access
Semantic Scholar
Multivariate Analysis of Functional Metagenomes
E. Dinsdale, R. Edwards, B. Bailey, Imre Tuba +11 more
2013Frontiers in Genetics57 citations Open access
Semantic Scholar
Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes
Bhavya Papudeshi, J. M. Haggerty, M. Doane, Megan M. Morris +8 more
2017BMC Genomics55 citations Open access
Semantic Scholar
Can we measure beauty? Computational evaluation of coral reef aesthetics
A. Haas, Marine Guibert, Anja Foerschner, T. Co. +11 more
2015PeerJ55 citations Open access
Semantic Scholar
Fish or Germs? Microbial Dynamics Associated with Changing Trophic Structures on Coral Reefs
E. Dinsdale, F. Rohwer
201151 citations
Semantic Scholar
The skin microbiome of the common thresher shark (Alopias vulpinus) has low taxonomic and gene function &bgr;‐diversity
M. Doane, J. M. Haggerty, Dovi Kacev, B. Papudeshi +1 more
2017Environmental Microbiology Reports48 citations Open access
Semantic Scholar
Phables: from fragmented assemblies to high-quality bacteriophage genomes
V. Mallawaarachchi, M. Roach, P. Decewicz, B. Papudeshi +8 more
2023bioRxiv46 citations Open access
Semantic Scholar
Rhodoliths holobionts in a changing ocean: host-microbes interactions mediate coralline algae resilience under ocean acidification
G. Cavalcanti, P. Shukla, Megan M. Morris, Bárbara Ribeiro +6 more
2018BMC Genomics43 citations Open access
Semantic Scholar
Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum
T. D. Matthews, R. Schmieder, G. Silva, J. Busch +11 more
2015PLoS ONE43 citations Open access
Semantic Scholar
Aura-biomes are present in the water layer above coral reef benthic macro-organisms
Kevin Walsh, J. M. Haggerty, M. Doane, J. Hansen +7 more
2017PeerJ36 citations Open access
Semantic Scholar
NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education
E. Dinsdale, S. Elgin, N. Grandgenett, William R. Morgan +4 more
2015CBE - Life Sciences Education35 citations Open access
Semantic Scholar
Coral and Seawater Metagenomes Reveal Key Microbial Functions to Coral Health and Ecosystem Functioning Shaped at Reef Scale
L. Lima, Amanda T. Alker, B. Papudeshi, Megan M. Morris +3 more
2021Microbial Ecology34 citations Open access
Semantic Scholar
Substrate Type Determines Metagenomic Profiles from Diverse Chemical Habitats
Thomas C. Jeffries, J. Seymour, J. Gilbert, E. Dinsdale +6 more
2011PLoS ONE34 citations Open access
Semantic Scholar
Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes
C. Silveira, F. Coutinho, G. Cavalcanti, Sean Benler +8 more
2020BMC Genomics33 citations Open access
Semantic Scholar
Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle
C. Silveira, G. Gregoracci, F. Coutinho, G. G. Z. Silva +9 more
2017Frontiers in Microbiology33 citations Open access
Semantic Scholar
The Lagoon at Caroline/Millennium Atoll, Republic of Kiribati: Natural History of a Nearly Pristine Ecosystem
K. Barott, J. Caselle, E. Dinsdale, A. Friedlander +6 more
2010PLoS ONE32 citations Open access
Semantic Scholar
Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions
B. Dutilh, C. Thompson, A. Vicente, M. A. Marín +15 more
2014BMC Genomics31 citations Open access
Semantic Scholar
Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome
A. C. Andrade, A. Fróes, F. Lopes, F. Thompson +3 more
2017Microbial Ecology30 citations
Semantic Scholar
Nearshore Pelagic Microbial Community Abundance Affects Recruitment Success of Giant Kelp, Macrocystis pyrifera
Megan M. Morris, J. M. Haggerty, B. Papudeshi, A. Vega +2 more
2016Frontiers in Microbiology25 citations Open access
Semantic Scholar
Microbes, metagenomes and marine mammals: enabling the next generation of scientist to enter the genomic era
R. Edwards, J. M. Haggerty, Noriko Cassman, J. Busch +8 more
2013BMC Genomics25 citations Open access
Semantic Scholar
Taking Advantage of the Genomics Revolution for Monitoring and Conservation of Chondrichthyan Populations
S. Johri, M. Doane, Lauren Allen, E. Dinsdale
2019Diversity24 citations Open access
Semantic Scholar
Novel ssDNA Viruses Detected in the Virome of Bleached, Habitat-Forming Kelp Ecklonia radiata
Douglas T. Beattie, T. Lachnit, E. Dinsdale, T. Thomas +1 more
2018Frontiers in Marine Science23 citations Open access
Semantic Scholar
Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition
Y. Lim, Daniel Cuevas, G. Silva, Kristen Aguinaldo +15 more
2014PeerJ23 citations Open access
Semantic Scholar
The Promise and Pitfalls of Prophages
J. McKerral, B. Papudeshi, L. Inglis, M. Roach +5 more
2023bioRxiv22 citations Open access
Semantic Scholar
The Epidermal Microbiome Within an Aggregation of Leopard Sharks (Triakis semifasciata) Has Taxonomic Flexibility with Gene Functional Stability Across Three Time-points
M. Doane, Colton J. Johnson, S. Johri, E. Kerr +8 more
2021Microbial Ecology21 citations Open access
Semantic Scholar
Elasmobranch microbiomes: emerging patterns and implications for host health and ecology
C. Perry, Zoe A. Pratte, Ana G Clavere-Graciette, K. Ritchie +11 more
2021Animal Microbiome20 citations Open access
Semantic Scholar

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Megan M. Morris

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