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T. Mochizuki · SciRah

Researcher profile · Semantic Scholar

T. Mochizuki

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T. Mochizuki — researcher profile on SciRah

h-index: 13
Works: 30
Citations: 952

Most-cited papers

Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin
Sean A. Montgomery, Yasuhiro Tanizawa, Bence Gálik, Nan Wang +21 more
2019bioRxiv192 citations Open access
Semantic Scholar
Rice expression atlas in reproductive development.
M. Fujita, Youko Horiuchi, Y. Ueda, Y. Mizuta +14 more
2010Plant and Cell Physiology145 citations Open access
Semantic Scholar
OryzaExpress: An Integrated Database of Gene Expression Networks and Omics Annotations in Rice
Kazuki Hamada, K. Hongo, K. Suwabe, A. Shimizu +16 more
2010Plant and Cell Physiology108 citations Open access
Semantic Scholar
Hybrid Origins of Citrus Varieties Inferred from DNA Marker Analysis of Nuclear and Organelle Genomes
Tokurou Shimizu, A. Kitajima, K. Nonaka, T. Yoshioka +8 more
2016PLoS ONE91 citations Open access
Semantic Scholar
DDBJ Read Annotation Pipeline: A Cloud Computing-Based Pipeline for High-Throughput Analysis of Next-Generation Sequencing Data
Hideki Nagasaki, T. Mochizuki, Y. Kodama, S. Saruhashi +8 more
2013DNA Research70 citations Open access
Semantic Scholar
Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system
Miyuki Iwasaki, Tomoaki Kajiwara, Yukiko Yasui, Yoshihiro Yoshitake +20 more
2021Current Biology63 citations Open access
Semantic Scholar
Draft Sequencing of the Heterozygous Diploid Genome of Satsuma (Citrus unshiu Marc.) Using a Hybrid Assembly Approach
Tokurou Shimizu, Yasuhiro Tanizawa, T. Mochizuki, Hideki Nagasaki +5 more
2017Frontiers in Genetics63 citations Open access
Semantic Scholar
MarpolBase Expression: A Web-Based, Comprehensive Platform for Visualization and Analysis of Transcriptomes in the Liverwort Marchantia polymorpha
Shogo Kawamura, Facundo Romani, Masaru Yagura, T. Mochizuki +8 more
2022bioRxiv51 citations Open access
Semantic Scholar
OryzaGenome: Genome Diversity Database of Wild Oryza Species
Hajime Ohyanagi, Toshinobu Ebata, Xue-Hui Huang, Hao Gong +10 more
2015Plant and Cell Physiology46 citations Open access
Semantic Scholar
MarpolBase: genome database for Marchantia polymorpha featuring high quality reference genome sequences
Yasuhiro Tanizawa, T. Mochizuki, Masaru Yagura, M. Sakamoto +10 more
2025bioRxiv22 citations Open access
Semantic Scholar
A highly contiguous genome assembly of red perilla (Perilla frutescens) domesticated in Japan
K. Tamura, M. Sakamoto, Yasuhiro Tanizawa, T. Mochizuki +6 more
2022bioRxiv22 citations Open access
Semantic Scholar
Genome evolution of a nonparasitic secondary heterotroph, the diatom Nitzschia putrida
Ryoma Kamikawa, T. Mochizuki, M. Sakamoto, Yasuhiro Tanizawa +25 more
2022Science Advances20 citations Open access
Semantic Scholar
A genomic approach to selecting robust and versatile SNP sets from next-generation sequencing data for genome-wide association study in citrus cultivars
Tokurou Shimizu, E. Kaminuma, K. Nonaka, T. Yoshioka +8 more
201614 citations Open access
Semantic Scholar
Draft Genome Sequence of Weissella oryzae SG25T, Isolated from Fermented Rice Grains
Yasuhiro Tanizawa, Takatomo Fujisawa, T. Mochizuki, E. Kaminuma +3 more
2014Genome Announcements12 citations Open access
Semantic Scholar
A practical assembly guideline for genomes with various levels of heterozygosity
T. Mochizuki, M. Sakamoto, Yasuhiro Tanizawa, T. Nakayama +3 more
2023Briefings Bioinform.11 citations Open access
Semantic Scholar
Global expression differences and tissue specific expression differences in rice evolution result in two contrasting types of differentially expressed genes
Youko Horiuchi, Y. Harushima, H. Fujisawa, T. Mochizuki +3 more
2015BMC Genomics7 citations Open access
Semantic Scholar
Gene expression profiles associated with early relapse during first remission induction in canine multicentric high-grade B-cell lymphoma
Hiroto Toyoda, A. Tani, Y. Goto-Koshino, T. Motegi +14 more
2023Journal of Veterinary Medical Science4 citations Open access
Semantic Scholar
A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression arrays
Youko Horiuchi, Y. Harushima, H. Fujisawa, T. Mochizuki +3 more
2010BMC Genomics3 citations Open access
Semantic Scholar
Chromosome-scale genomes of two wild flowering cherries (Cerasus itosakura and Cerasus jamasakura) provide insights into structural evolution in Cerasus
Kazumichi Fujiwara, A. Toyoda, Toshio Katsuki, Yutaka Sato +14 more
2025bioRxiv2 citations Open access
Semantic Scholar
Best Practices for Comprehensive Annotation of Neuropeptides of Gryllus bimaculatus
T. Mochizuki, M. Sakamoto, Yasuhiro Tanizawa, Hitomi Seike +5 more
2023Insects2 citations Open access
Semantic Scholar
Genome evolution of a non-parasitic secondary heterotroph, the diatom Nitzschia putrida
Ryoma Kamikawa, T. Mochizuki, M. Sakamoto, Yasuhiro Tanizawa +25 more
2021bioRxiv2 citations Open access
Semantic Scholar
DNApod: DNA polymorphism annotation database from next-generation sequence read archives
T. Mochizuki, Yasuhiro Tanizawa, Takatomo Fujisawa, T. Ohta +8 more
2017PLoS ONE2 citations Open access
Semantic Scholar
Draft Genome Sequence of Lactobacillus oryzae Strain SG293T
Yasuhiro Tanizawa, Takatomo Fujisawa, T. Mochizuki, E. Kaminuma +2 more
2014Genome Announcements1 citations Open access
Semantic Scholar
Author and Subject Index
Y. Fukuda, H. Bamba, M. Okui, K. Tamura +97 more
1998Digestion1 citations Open access
Semantic Scholar
From neuropeptide and receptor annotation to ligand-receptor pairing: a sequence- and structure-based framework for mapping the neuropeptide-receptor interactome in Gryllus bimaculatus
Febrina Margaretha, M. Sakamoto, Hitomi Seike, Shinji Nagata +2 more
2026bioRxiv0 citations Open access
Semantic Scholar
DNApod: Implementation of Virtual Machine for DNApod Workflow and Genotype Imputation
T. Mochizuki, H. Kajiya-Kanegae, Yasuhiro Tanizawa, Takatomo Fujisawa +9 more
20160 citations
Semantic Scholar
Be happy with your Perl scripts
Masaaki Kobayashi, Y. Monden, T. Mochizuki, T. Kudo +4 more
20160 citations Open access
Semantic Scholar
DNA Polymorphism Database from New-Generation Sequence Read Archive and Analytical Workflow
T. Mochizuki
20150 citations
Semantic Scholar
Introduction of NIG supercomputer with command line-based NGS analysis
E. Kaminuma, T. Mochizuki, Y. Monden, Masaaki Kobayashi +2 more
20150 citations Open access
Semantic Scholar
Constructing an Integrated DNA Polymorphism Database and an Analytical Workflow for Plants and Bacteria
T. Mochizuki
20140 citations
Semantic Scholar

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