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R. McNerney · SciRah

Researcher profile · Semantic Scholar

R. McNerney

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R. McNerney — researcher profile on SciRah

h-index: 53
Works: 162
Citations: 9,274

Most-cited papers

The epidemiology, pathogenesis, transmission, diagnosis, and management of multidrug-resistant, extensively drug-resistant, and incurable tuberculosis.
K. Dheda, T. Gumbo, G. Maartens, K. Dooley +38 more
2017The Lancet Respiratory Medicine653 citations Open access
Semantic Scholar
A robust SNP barcode for typing Mycobacterium tuberculosis complex strains
F. Coll, R. McNerney, J. Guerra-Assunção, J. Glynn +6 more
2014Nature Communications616 citations Open access
Semantic Scholar
Advances in tuberculosis diagnostics: the Xpert MTB/RIF assay and future prospects for a point-of-care test
S. Lawn, P. Mwaba, M. Bates, A. Piatek +15 more
2013Lancet. Infectious Diseases (Print)467 citations Open access
Semantic Scholar
Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs
J. Phelan, D. O'Sullivan, D. Machado, J. Ramos +8 more
2019Genome Medicine448 citations Open access
Semantic Scholar
Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences
F. Coll, R. McNerney, M. Preston, J. Guerra-Assunção +15 more
2015Genome Medicine404 citations Open access
Semantic Scholar
A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis
P. Miotto, B. Tessema, E. Tagliani, L. Chindelevitch +31 more
2017European Respiratory Journal347 citations Open access
Semantic Scholar
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis
F. Coll, J. Phelan, G. Hill-Cawthorne, Mridul B. Nair +47 more
2018Nature Genetics327 citations Open access
Semantic Scholar
Tuberculosis: advances and challenges in development of new diagnostics and biomarkers.
G. Walzl, R. McNerney, N. du Plessis, M. Bates +3 more
2018Lancet. Infectious Diseases (Print)299 citations Open access
Semantic Scholar
Drug-resistant tuberculosis: time for visionary political leadership.
I. Abubakar, M. Zignol, D. Falzon, M. Raviglione +27 more
2013Lancet. Infectious Diseases (Print)279 citations Open access
Semantic Scholar
Large-scale whole genome sequencing of M. tuberculosis provides insights into transmission in a high prevalence area
Ja Guerra-Assuncao, A. Crampin, Rmgj Houben, T. Mzembe +11 more
2015eLife268 citations Open access
Semantic Scholar
Towards a point-of-care test for active tuberculosis: obstacles and opportunities
R. McNerney, P. Daley
2011Nature Reviews Microbiology222 citations
Semantic Scholar
Tuberculosis diagnostics and biomarkers: needs, challenges, recent advances, and opportunities.
R. McNerney, M. Maeurer, I. Abubakar, B. Marais +26 more
2012Journal of Infectious Diseases218 citations Open access
Semantic Scholar
Drug-resistant tuberculosis--current dilemmas, unanswered questions, challenges, and priority needs.
Alimuddin Zumla, I. Abubakar, M. Raviglione, M. Hoelscher +20 more
2012Journal of Infectious Diseases186 citations
Semantic Scholar
Recurrence due to Relapse or Reinfection With Mycobacterium tuberculosis: A Whole-Genome Sequencing Approach in a Large, Population-Based Cohort With a High HIV Infection Prevalence and Active Follow-up
J. Guerra-Assunção, R. Houben, A. Crampin, T. Mzembe +11 more
2014Journal of Infectious Diseases178 citations Open access
Semantic Scholar
Rapid Detection of Mycobacterium tuberculosis by Recombinase Polymerase Amplification
D. Boyle, R. McNerney, Hwee Teng Low, B. Leader +6 more
2014PLoS ONE147 citations Open access
Semantic Scholar
Outcomes, infectiousness, and transmission dynamics of patients with extensively drug-resistant tuberculosis and home-discharged patients with programmatically incurable tuberculosis: a prospective cohort study.
K. Dheda, J. Limberis, E. Pietersen, J. Phelan +19 more
2017The Lancet Respiratory Medicine121 citations Open access
Semantic Scholar
Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase
M. Ezewudo, A. Borens, Á. Chiner-Oms, P. Miotto +25 more
2018Scientific Reports110 citations Open access
Semantic Scholar
Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance
J. Phelan, F. Coll, R. McNerney, D. Ascher +12 more
2016BMC Medicine110 citations Open access
Semantic Scholar
The analysis of para-cresol production and tolerance in Clostridium difficile 027 and 012 strains
Lisa F. Dawson, Elizabeth H. Donahue, Stephen T. Cartman, R. H. Barton +4 more
2011BMC Microbiology109 citations Open access
Semantic Scholar
Perspectives on Advances in Tuberculosis Diagnostics, Drugs, and Vaccines.
M. Schito, G. Migliori, H. Fletcher, R. McNerney +12 more
2015Clinical Infectious Diseases107 citations Open access
Semantic Scholar
Whole Genome Sequencing Shows a Low Proportion of Tuberculosis Disease Is Attributable to Known Close Contacts in Rural Malawi
J. Glynn, J. Guerra-Assunção, R. Houben, L. Sichali +8 more
2015PLoS ONE106 citations Open access
Semantic Scholar
Diagnostics for Developing Countries
R. McNerney
2015Diagnostics98 citations Open access
Semantic Scholar
Whole Genome Sequencing Based Characterization of Extensively Drug-Resistant Mycobacterium tuberculosis Isolates from Pakistan
Asho Ali, Z. Hasan, R. McNerney, K. Mallard +6 more
2015PLoS ONE98 citations Open access
Semantic Scholar
Genomic expression catalogue of a global collection of BCG vaccine strains show evidence for highly diverged metabolic and cell-wall adaptations
A. M. Abdallah, G. Hill-Cawthorne, T. Otto, F. Coll +16 more
2015Scientific Reports98 citations Open access
Semantic Scholar
PolyTB: A genomic variation map for Mycobacterium tuberculosis
F. Coll, M. Preston, J. Guerra-Assunção, Grant Hill-Cawthorn +12 more
2014Tuberculosis97 citations Open access
Semantic Scholar
Effectiveness of the Standard WHO Recommended Retreatment Regimen (Category II) for Tuberculosis in Kampala, Uganda: A Prospective Cohort Study
E. Jones-López, Irene Ayakaka, J. Levin, Nancy Reilly +14 more
2011PLoS Medicine95 citations Open access
Semantic Scholar
SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences
F. Coll, K. Mallard, M. Preston, S. Bentley +4 more
2012Bioinform.92 citations Open access
Semantic Scholar
Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages
J. Phelan, F. Coll, I. Bergval, R. Anthony +26 more
2016BMC Genomics91 citations Open access
Semantic Scholar
Elucidating Emergence and Transmission of Multidrug-Resistant Tuberculosis in Treatment Experienced Patients by Whole Genome Sequencing
T. Clark, K. Mallard, F. Coll, M. Preston +14 more
2013PLoS ONE91 citations Open access
Semantic Scholar
Tuberculosis in Sudan: a study of Mycobacterium tuberculosis strain genotype and susceptibility to anti-tuberculosis drugs
G. S. Sharaf Eldin, imad Mohamed Fadl Elmula, M. S. Ali, Ahmed B Ali +4 more
2011BMC Infectious Diseases89 citations Open access
Semantic Scholar
Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data
B. Sobkowiak, J. Glynn, R. Houben, K. Mallard +9 more
2018BMC Genomics85 citations Open access
Semantic Scholar
Machine Learning Predicts Accurately Mycobacterium tuberculosis Drug Resistance From Whole Genome Sequencing Data
Wouter Deelder, Sofia Christakoudi, J. Phelan, E. D. Benavente +4 more
2019Frontiers in Genetics81 citations Open access
Semantic Scholar
Effect of new tuberculosis diagnostic technologies on community-based intensified case finding: a multicentre randomised controlled trial.
G. Calligaro, L. Zijenah, J. Peter, G. Theron +9 more
2017Lancet. Infectious Diseases (Print)78 citations
Semantic Scholar
Emerging technologies in point-of-care molecular diagnostics for resource-limited settings
R. Peeling, R. McNerney
2014Expert Review of Molecular Diagnostics70 citations
Semantic Scholar
Removing the bottleneck in whole genome sequencing of Mycobacterium tuberculosis for rapid drug resistance analysis: a call to action.
R. McNerney, T. Clark, S. Campino, C. Rodrigues +5 more
2017International Journal of Infectious Diseases67 citations Open access
Semantic Scholar
Unraveling Mycobacterium tuberculosis genomic diversity and evolution in Lisbon, Portugal, a highly drug resistant setting
J. Perdigão, H. Silva, D. Machado, R. Macedo +12 more
2014BMC Genomics64 citations Open access
Semantic Scholar
The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs
J. Phelan, D. O'Sullivan, D. Machado, J. Ramos +8 more
2016Genome Medicine62 citations Open access
Semantic Scholar
Microscopy compared to culture for the diagnosis of tuberculosis in induced sputum samples: a systematic review.
P. Hepple, N. Ford, R. McNerney
2012The International Journal of Tuberculosis and Lung Disease62 citations
Semantic Scholar
New tuberculosis diagnostics and rollout.
R. McNerney, J. Cunningham, P. Hepple, Alimuddin Zumla
2015International Journal of Infectious Diseases57 citations Open access
Semantic Scholar
Production of volatile organic compounds by mycobacteria.
R. McNerney, K. Mallard, P. Okolo, C. Turner
2012FEMS Microbiology Letters52 citations Open access
Semantic Scholar
Regulation of medical diagnostics and medical devices in the East African community partner states
S. Rugera, R. McNerney, Albert Poon, Gladys Akimana +10 more
2014BMC Health Services Research50 citations Open access
Semantic Scholar
Increasing access to diagnostics through technology transfer and local production
R. Peeling, R. McNerney
201142 citations
Semantic Scholar
Methylation in Mycobacterium tuberculosis is lineage specific with associated mutations present globally
J. Phelan, P. D. de Sessions, L. Tientcheu, J. Perdigão +12 more
2018Scientific Reports41 citations Open access
Semantic Scholar
A multiple genome analysis of Mycobacterium tuberculosis reveals specific novel genes and mutations associated with pyrazinamide resistance
P. Sheen, David Requena, Eduardo Gushiken, R. Gilman +11 more
2017BMC Genomics39 citations Open access
Semantic Scholar
Propagation of Respiratory Aerosols by the Vuvuzela
Kathryn Lai, C. Bottomley, R. McNerney
2011PLoS ONE39 citations Open access
Semantic Scholar
Treatment Outcomes of New Tuberculosis Patients Hospitalized in Kampala, Uganda: A Prospective Cohort Study
B. Kirenga, J. Levin, Irene Ayakaka, W. Worodria +15 more
2014PLoS ONE38 citations Open access
Semantic Scholar
Single nucleotide polymorphisms in efflux pumps genes in extensively drug resistant Mycobacterium tuberculosis isolates from Pakistan.
A. Kanji, R. Hasan, Asho Ali, Ambreen Zaver +9 more
2017Tuberculosis34 citations Open access
Semantic Scholar
Detection of ¡ i ¿ Mycobacterium tuberculosis ¡ / i ¿ in sputum by gas chromatography-mass spectrometry of methyl mycocerosates released by thermochemolysis
D. O'Sullivan, Simona C. Nicoara, Reggie Mutetwa, S. Mungofa +6 more
201332 citations
Semantic Scholar
Improving access to new diagnostics through harmonised regulation: priorities for action
R. McNerney, K. Sollis, R. Peeling
2014African Journal of Laboratory Medicine31 citations Open access
Semantic Scholar
Spatial Network Mapping of Pulmonary Multidrug-Resistant Tuberculosis Cavities Using RNA Sequencing
K. Dheda, L. Lenders, Shashikant Srivastava, G. Magombedze +17 more
2019American Journal of Respiratory and Critical Care Medicine30 citations Open access
Semantic Scholar

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