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S. Durinck · SciRah

Researcher profile · Semantic Scholar

S. Durinck

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S. Durinck — researcher profile on SciRah

h-index: 35
Works: 61
Citations: 22K

Most-cited papers

Comprehensive genomic characterization defines human glioblastoma genes and core pathways
R. McLendon, A. Friedman, D. Bigner, Erwin G. Van Meir +227 more
2008Nature7,110 citations Open access
Semantic Scholar
Mapping Identifiers for the Integration of Genomic Datasets with the R/Bioconductor package biomaRt
S. Durinck, P. Spellman, E. Birney, W. Huber
2009Nature Protocols3,854 citations Open access
Semantic Scholar
BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
S. Durinck, Y. Moreau, A. Kasprzyk, Sean Davis +3 more
2005Bioinform.2,237 citations Open access
Semantic Scholar
Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer
C. Rudin, S. Durinck, Eric W. Stawiski, J. Poirier +33 more
2012Nature Genetics1,012 citations Open access
Semantic Scholar
Recurrent R-spondin fusions in colon cancer
S. Seshagiri, Eric W. Stawiski, S. Durinck, Z. Modrusan +23 more
2012Nature960 citations Open access
Semantic Scholar
Abstract LB-331: Comprehensive genomic analysis of malignant pleural mesothelioma identifies recurrent mutations, gene fusions and splicing alterations
S. Seshagiri, Eric W. Stawiski, Leonard D. Goldstein, S. Durinck +7 more
2016846 citations
Semantic Scholar
The BioMart community portal: an innovative alternative to large, centralized data repositories
D. Smedley, S. Haider, S. Durinck, Luca Pandini +101 more
2015Nucleic Acids Res.729 citations Open access
Semantic Scholar
A comprehensive transcriptional portrait of human cancer cell lines
C. Klijn, S. Durinck, Eric W. Stawiski, P. Haverty +26 more
2014Nature Biotechnology599 citations
Semantic Scholar
Subtype and pathway specific responses to anticancer compounds in breast cancer
L. Heiser, A. Sadanandam, Wen-Lin Kuo, S. Benz +39 more
2011Proceedings of the National Academy of Sciences of the United States of America482 citations Open access
Semantic Scholar
The GenomeAsia 100K Project enables genetic discoveries across Asia
J. Wall, Eric W. Stawiski, A. Ratan, Hie-Lim Kim +65 more
2019Nature414 citations Open access
Semantic Scholar
Oncogenic ERBB3 mutations in human cancers.
B. Jaiswal, Noelyn M. Kljavin, Eric W. Stawiski, Emily Chan +27 more
2013Cancer Cell359 citations Open access
Semantic Scholar
Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications.
P. Hilson, J. Allemeersch, T. Altmann, S. Aubourg +42 more
2004Genome Research349 citations Open access
Semantic Scholar
Spectrum of diverse genomic alterations define non–clear cell renal carcinoma subtypes
S. Durinck, Eric W. Stawiski, Andrea Pavía-Jiménez, Z. Modrusan +37 more
2014Nature Genetics338 citations Open access
Semantic Scholar
The MYCN oncogene is a direct target of miR-34a
J.-S. Wei, Y. Song, S. Durinck, Q.-R. Chen +7 more
2008Oncogene312 citations Open access
Semantic Scholar
Modeling precision treatment of breast cancer
A. Daemen, O. Griffith, L. Heiser, Nicholas Wang +23 more
2013Genome Biology278 citations Open access
Semantic Scholar
Temporal Dissection of Tumorigenesis in Primary Cancers
S. Durinck, Christine Ho, Nicholas Wang, W. Liao +28 more
2011Cancer Discovery251 citations Open access
Semantic Scholar
Targeting PTPRK-RSPO3 colon tumours promotes differentiation and loss of stem-cell function
E. Storm, S. Durinck, F. de Sousa e Melo, Jarrod R. Tremayne +14 more
2015Nature235 citations
Semantic Scholar
CRISPR off-target analysis in genetically engineered rats and mice
Keith Anderson, M. Haeussler, Colin K. Watanabe, V. Janakiraman +18 more
2018Nature Methods193 citations Open access
Semantic Scholar
Silencing of retrotransposons by SETDB1 inhibits the interferon response in acute myeloid leukemia
Trinna L Cuellar, Anna-Maria Herzner, Xiaotian Zhang, Yogesh Goyal +12 more
2017Journal of Cell Biology188 citations Open access
Semantic Scholar
The Indian cobra reference genome and transcriptome enables comprehensive identification of venom toxins
Kushal Suryamohan, Sajesh P. Krishnankutty, Joseph Guillory, Matthew J. Jevit +38 more
2020Nature Genetics163 citations Open access
Semantic Scholar
Actionable activating oncogenic ERRB2/HER2 transmembrane and juxtamembrane domain mutations
Kanika Bajaj Pahuja, Thong T. Nguyen, B. Jaiswal, K. Prabhash +30 more
2018Cancer Cell159 citations Open access
Semantic Scholar
An Empirical Approach Leveraging Tumorgrafts to Dissect the Tumor Microenvironment in Renal Cell Carcinoma Identifies Missing Link to Prognostic Inflammatory Factors
Tao Wang, Rong Lu, P. Kapur, B. Jaiswal +27 more
2018Cancer Discovery155 citations Open access
Semantic Scholar
Expression Profiler: next generation - an online platform for analysis of microarray data
M. Kapushesky, P. Kemmeren, A. Culhane, S. Durinck +7 more
2004Nucleic Acids Res.129 citations Open access
Semantic Scholar
Exon-level microarray analyses identify alternative splicing programs in breast cancer
A. Lapuk, H. Marr, L. Jakkula, Helder Pedro +21 more
2010Molecular Cancer Research126 citations Open access
Semantic Scholar
Benchmarking the CATMA Microarray. A Novel Tool forArabidopsis Transcriptome Analysis1[w]
J. Allemeersch, S. Durinck, R. Vanderhaeghen, P. Alard +14 more
2005Plant Physiology98 citations Open access
Semantic Scholar
Integrated exome and transcriptome sequencing reveals ZAK isoform usage in gastric cancer
Jin-Feng Liu, M. Mccleland, Eric W. Stawiski, Florian Gnad +26 more
2014Nature Communications84 citations Open access
Semantic Scholar
Conditional activation of Pik3caH1047R in a knock-in mouse model promotes mammary tumorigenesis and emergence of mutations
Wenlin Yuan, Eric W. Stawiski, V. Janakiraman, Emily Chan +17 more
2012Oncogene80 citations Open access
Semantic Scholar
GenomeGraphs: integrated genomic data visualization with R
S. Durinck, James H. Bullard, P. Spellman, S. Dudoit
2009BMC Bioinformatics78 citations Open access
Semantic Scholar
Single-cell RNA sequencing identifies distinct mouse medial ganglionic eminence cell types
Y. Chen, Brad A. Friedman, Connie Ha, S. Durinck +4 more
2017Scientific Reports75 citations Open access
Semantic Scholar
Determinants of renal cell carcinoma invasion and metastatic competence
Kangsan Kim, Qin-Bo Zhou, A. Christie, C. Stevens +21 more
2021Nature Communications64 citations Open access
Semantic Scholar
Evaluating the quality of the 1000 genomes project data
S. Belsare, Michal Levy-Sakin, Y. Mostovoy, S. Durinck +6 more
2018BMC Genomics56 citations Open access
Semantic Scholar
Integrated genomic analysis reveals mutated ELF3 as a potential gallbladder cancer vaccine candidate
A. Pandey, Eric W. Stawiski, S. Durinck, H. Gowda +36 more
2020Nature Communications54 citations Open access
Semantic Scholar
ERK Mutations and Amplification Confer Resistance to ERK-Inhibitor Therapy
B. Jaiswal, S. Durinck, Eric W. Stawiski, Jianping Yin +6 more
2018Clinical Cancer Research54 citations
Semantic Scholar
microRNA Profiling Identifies Cancer-Specific and Prognostic Signatures in Pediatric Malignancies
Jun S. Wei, P. Johansson, Qingrong Chen, Young K. Song +7 more
2009Clinical Cancer Research50 citations Open access
Semantic Scholar
Open Access Methodology Article Prediction of Epigenetically Regulated Genes in Breast Cancer Cell Lines
Leandro A. Loss, A. Sadanandam, S. Durinck, S. Nautiyal +8 more
38 citations
Semantic Scholar
Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data
S. Batra, Michal Levy-Sakin, Jacqueline A. Robinson, Joseph Guillory +7 more
2019bioRxiv34 citations Open access
Semantic Scholar
Pre-processing of microarray data and analysis of differential expression.
S. Durinck
2008Methods in molecular biology31 citations
Semantic Scholar
Single-molecule nanopore sequencing reveals extreme target copy number heterogeneity in arylomycin-resistant mutants
Hany S. Girgis, Cory D. DuPai, Jessica M. Lund, Janina Reeder +6 more
2020Proceedings of the National Academy of Sciences of the United States of America24 citations Open access
Semantic Scholar
Comparative genomics incorporating translocation renal cell carcinoma mouse model reveals molecular mechanisms of tumorigenesis
G. Prakasam, Akhilesh Mishra, A. Christie, Jeffrey Miyata +20 more
2024Journal of Clinical Investigation23 citations Open access
Semantic Scholar
Adaptive adipose tissue stromal plasticity in response to cold stress and antibody-based metabolic therapy
Joshua C. Chang, S. Durinck, Mark Z. Chen, N. Martinez-Martin +19 more
2019Scientific Reports20 citations Open access
Semantic Scholar
Elevated Serum Amino Acids Induce a Subpopulation of Alpha Cells to Initiate Pancreatic Neuroendocrine Tumor Formation
Derek K. Smith, L. Kates, S. Durinck, N. Patel +7 more
2020Cell Reports Medicine19 citations Open access
Semantic Scholar
Identification of African-Specific Admixture between Modern and Archaic Humans.
J. Wall, A. Ratan, Eric W. Stawiski, Hie-Lim Kim +65 more
2019American Journal of Human Genetics15 citations Open access
Semantic Scholar
In vitro differential sensitivity of melanomas to phenothiazines is based on the presence of codon 600 BRAF mutation
O. Ikediobi, M. Reimers, S. Durinck, P. Blower +3 more
2008Molecular Cancer Therapeutics15 citations Open access
Semantic Scholar
Population-wide gene disruption in the murine lung epithelium via AAV-mediated delivery of CRISPR-Cas9 components
Honglin Chen, S. Durinck, Hetal Patel, O. Foreman +10 more
2022Molecular Therapy: Methods & Clinical Development14 citations Open access
Semantic Scholar
Importing MAGE-ML format microarray data into BioConductor
S. Durinck, J. Allemeersch, V. Carey, Y. Moreau +1 more
2004Bioinform.14 citations Open access
Semantic Scholar
Plant-Based Microarray Data at the European Bioinformatics Institute. Introducing AtMIAMExpress, a Submission Tool for Arabidopsis Gene Expression Data to ArrayExpress
Gaurab Mukherjee, Niran Abeygunawardena, H. Parkinson, S. Contrino +11 more
2005Plant Physiology11 citations Open access
Semantic Scholar
S100a4 upregulation in Pik3caH1047R;Trp53R270H;MMTV-Cre-driven mammary tumors promotes metastasis
Wenlin Yuan, Leonard D. Goldstein, S. Durinck, Y. Chen +8 more
2019Breast Cancer Research7 citations Open access
Semantic Scholar
Erratum to: Modeling precision treatment of breast cancer
A. Daemen, O. Griffith, L. Heiser, Nicholas Wang +23 more
2015Genome Biology7 citations Open access
Semantic Scholar
Homozygous KSR1 deletion attenuates morbidity but does not prevent tumor development in a mouse model of RAS-driven pancreatic cancer
E. Germino, Joseph P Miller, L. Diehl, Carter J. Swanson +4 more
2018PLoS ONE4 citations Open access
Semantic Scholar
Embryonic lethality and defective mammary gland development of activator‐function impaired conditional knock‐in Erbb3 V943R mice
K. Senger, Wenlin Yuan, Meredith S. Sagolla, Jonas Doerr +16 more
2020Advanced genetics3 citations Open access
Semantic Scholar

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