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U. Sauer · SciRah

Researcher profile · Semantic Scholar

U. Sauer

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U. Sauer — researcher profile on SciRah

h-index: 103
Works: 356
Citations: 34K

Most-cited papers

Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices
Saleh Alseekh, A. Aharoni, Y. Brotman, K. Contrepois +28 more
2021Nature Methods942 citations Open access
Semantic Scholar
A Map of Protein-Metabolite Interactions Reveals Principles of Chemical Communication.
Ilaria Piazza, K. Kochanowski, V. Cappelletti, Tobias Fuhrer +3 more
2018Cell499 citations Open access
Semantic Scholar
Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen Overflow
Olga Ponomarova, Natalia Gabrielli, D. Sévin, M. Mülleder +8 more
2017Cell Systems388 citations Open access
Semantic Scholar
Disentangling metabolic functions of bacteria in the honey bee gut
Lucie Kešnerová, R. Mars, K. Ellegaard, Michael Troilo +2 more
2017bioRxiv378 citations Open access
Semantic Scholar
Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community
S. Blasche, Yongkyu Kim, R. Mars, Daniel Machado +10 more
2021Nature Microbiology284 citations Open access
Semantic Scholar
A universal tradeoff between growth and lag in fluctuating environments
M. Basan, Tomoya Honda, Dimitris Christodoulou, Manuel Hörl +11 more
2020Nature240 citations Open access
Semantic Scholar
Reserve Flux Capacity in the Pentose Phosphate Pathway Enables Escherichia coli's Rapid Response to Oxidative Stress.
Dimitris Christodoulou, H. Link, Tobias Fuhrer, K. Kochanowski +2 more
2018Cell Systems184 citations Open access
Semantic Scholar
Nontargeted Metabolomics Reveals the Multilevel Response to Antibiotic Perturbations.
M. Zampieri, Michael Zimmermann, M. Claassen, U. Sauer
2017Cell Reports164 citations Open access
Semantic Scholar
Frontiers of high-throughput metabolomics.
M. Zampieri, K. Sekar, Nicola Zamboni, U. Sauer
2017Current Opinion in Chemical Biology157 citations
Semantic Scholar
Spatiotemporal Analysis of a Glycolytic Activity Gradient Linked to Mouse Embryo Mesoderm Development
V. Bulusu, N. Prior, M. Snaebjornsson, Andreas Kuehne +6 more
2017Developmental Cell145 citations Open access
Semantic Scholar
Reconfiguration of metabolic fluxes in Pseudomonas putida as a response to sub-lethal oxidative stress
P. Nikel, Tobias Fuhrer, M. Chavarría, Alberto Sánchez-Pascuala +2 more
2021The ISME Journal136 citations Open access
Semantic Scholar
Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response
Y. Uchimura, Tobias Fuhrer, Hai Li, Melissa A. E. Lawson +11 more
2018Immunity136 citations Open access
Semantic Scholar
Regulatory mechanisms underlying coordination of amino acid and glucose catabolism in Escherichia coli
M. Zampieri, Manuel Hörl, Florian Hotz, Nicola F. Müller +1 more
2019Nature Communications135 citations Open access
Semantic Scholar
Escherichia coli limits Salmonella Typhimurium infections after diet-shifts and fat-mediated microbiota perturbation in mice
Sandra Y. Wotzka, M. Kreuzer, Lisa Maier, M. Arnoldini +22 more
2019Nature Microbiology131 citations Open access
Semantic Scholar
High-throughput metabolomic analysis predicts mode of action of uncharacterized antimicrobial compounds
M. Zampieri, Balázs Szappanos, M. V. Buchieri, Andrej Trauner +8 more
2018Science Translational Medicine117 citations Open access
Semantic Scholar
Metabolic cross-feeding structures the assembly of polysaccharide degrading communities
Sammy Pontrelli, Rachel E. Szabo, S. Pollak, Julia A. Schwartzman +3 more
2022Science Advances102 citations Open access
Semantic Scholar
Niche partitioning facilitates coexistence of closely related honey bee gut bacteria
Silvia Brochet, Andrew Quinn, R. Mars, Nicolas Neuschwander +2 more
2021eLife101 citations Open access
Semantic Scholar
A distinct growth physiology enhances bacterial growth under rapid nutrient fluctuations
Jen Nguyen, Vicente I. Fernandez, Sammy Pontrelli, U. Sauer +2 more
2020Nature Communications98 citations Open access
Semantic Scholar
Import of aspartate and malate by DcuABC drives H2/fumarate respiration to promote initial Salmonella gut-lumen colonization in mice
Bidong D. Nguyen, Cuenca V. Miguelangel, Johannes Hartl, Ersin Gül +20 more
2020Cell Host and Microbe95 citations Open access
Semantic Scholar
PknG senses amino acid availability to control metabolism and virulence of Mycobacterium tuberculosis
B. Rieck, Giulia Degiacomi, Michael Zimmermann, A. Cascioferro +13 more
2017PLoS Pathogens94 citations Open access
Semantic Scholar
Integration of Metabolomics and Transcriptomics Reveals a Complex Diet of Mycobacterium tuberculosis during Early Macrophage Infection
Michael Zimmermann, Maria Kogadeeva, M. Gengenbacher, Gayle K McEwen +4 more
2017mSystems93 citations Open access
Semantic Scholar
Genome-scale architecture of small molecule regulatory networks and the fundamental trade-off between regulation and enzymatic activity
Ed Reznik, Dimitris Christodoulou, J. Goldford, Emma A. Briars +3 more
2017Cell Reports83 citations Open access
Semantic Scholar
Bacterial Glycogen Provides Short-Term Benefits in Changing Environments
K. Sekar, Stephanie M. Linker, Jen Nguyen, Alix Grünhagen +2 more
2019Applied and Environmental Microbiology81 citations Open access
Semantic Scholar
Long-term evolution and short-term adaptation of microbiota strains and sub-strains in mice.
B. Yilmaz, C. Mooser, Irene Keller, Hai Li +14 more
2021Cell Host and Microbe80 citations Open access
Semantic Scholar
Endoplasmic reticulum stress in the intestinal epithelium initiates purine metabolite synthesis and promotes Th17 cell differentiation in the gut
J. Duan, J. D. Matute, L. Unger, T. Hanley +30 more
2023Immunity79 citations Open access
Semantic Scholar
Glycolysis/gluconeogenesis specialization in microbes is driven by biochemical constraints of flux sensing
S. Schink, Dimitris Christodoulou, Avik Mukherjee, Edward Athaide +5 more
2022Molecular Systems Biology71 citations Open access
Semantic Scholar
Stress-induced metabolic exchanges between complementary bacterial types underly a dynamic mechanism of inter-species stress resistance
K. Amarnath, Avaneesh V. Narla, Sammy Pontrelli, Jia-Jia Dong +7 more
2023Nature Communications70 citations Open access
Semantic Scholar
Biological insights through omics data integration
Elad Noor, S. Cherkaoui, U. Sauer
2019Current Opinion in Systems Biology70 citations
Semantic Scholar
Modulation of bacterial metabolism by the microenvironment controls MAIT cell stimulation
M. Schmaler, A. Colone, Julian Spagnuolo, Michael Zimmermann +14 more
2018Mucosal Immunology64 citations Open access
Semantic Scholar
Global coordination of metabolic pathways in Escherichia coli by active and passive regulation
K. Kochanowski, Hiroyuki Okano, V. Patsalo, J. Williamson +2 more
2021Molecular Systems Biology57 citations Open access
Semantic Scholar
Synthesis and degradation of FtsZ quantitatively predict the first cell division in starved bacteria
K. Sekar, R. Rusconi, John T. Sauls, Tobias Fuhrer +8 more
2018Molecular Systems Biology57 citations Open access
Semantic Scholar
Plasticity of the adult human small intestinal stoma microbiota.
B. Yilmaz, Tobias Fuhrer, Deborah Morgenthaler, N. Krupka +7 more
2022Cell Host and Microbe55 citations Open access
Semantic Scholar
Reserve Flux Capacity in the Pentose Phosphate Pathway by NADPH Binding Is Conserved across Kingdoms
Dimitris Christodoulou, Andreas Kuehne, A. Estermann, Tobias Fuhrer +2 more
2019iScience55 citations Open access
Semantic Scholar
Reversible amyloids of pyruvate kinase couple cell metabolism and stress granule disassembly
Gea Cereghetti, C. Wilson-Zbinden, V. Kissling, Maren Diether +9 more
2021Nature Cell Biology54 citations Open access
Semantic Scholar
(p)ppGpp Regulates a Bacterial Nucleosidase by an Allosteric Two-Domain Switch.
Y. Zhang, René L. Bærentsen, Tobias Fuhrer, U. Sauer +2 more
2019Molecules and Cells50 citations Open access
Semantic Scholar
Metabolic landscape of the male mouse gut identifies different niches determined by microbial activities
K. Meier, Julian Trouillon, Hai Li, M. Lang +5 more
2023Nature Metabolism48 citations Open access
Semantic Scholar
Towards detecting regulatory protein-metabolite interactions.
Maren Diether, U. Sauer
2017Current Opinion in Microbiology48 citations
Semantic Scholar
Systematic mapping of protein‐metabolite interactions in central metabolism of Escherichia coli
Maren Diether, Yaroslav Nikolaev, F. Allain, U. Sauer
2019Molecular Systems Biology47 citations Open access
Semantic Scholar
Extensive regulation of enzyme activity by phosphorylation in Escherichia coli
E. Schastnaya, Zrinka Raguz Nakic, Christoph H. Gruber, P. Doubleday +5 more
2021Nature Communications44 citations Open access
Semantic Scholar
Molecular mechanism of ATP versus GTP selectivity of adenylate kinase
P. Rogne, Marie Rosselin, C. Grundström, C. Hedberg +2 more
2018Proceedings of the National Academy of Sciences of the United States of America44 citations Open access
Semantic Scholar
Distinct N and C Cross-Feeding Networks in a Synthetic Mouse Gut Consortium
Pau Pérez Escriva, Tobias Fuhrer, U. Sauer
2021bioRxiv39 citations Open access
Semantic Scholar
β-Oxidation and autophagy are critical energy providers during acute glucose depletion in Saccharomyces cerevisiae
C. A. Weber, K. Sekar, Jeffrey H. Tang, Philipp Warmer +2 more
2020Proceedings of the National Academy of Sciences of the United States of America39 citations Open access
Semantic Scholar
Co‐catabolism of arginine and succinate drives symbiotic nitrogen fixation
C. E. Flores-Tinoco, Flavia Tschan, Tobias Fuhrer, Céline Margot +3 more
2020Molecular Systems Biology39 citations Open access
Semantic Scholar
High-Throughput Metabolomics and Diabetic Kidney Disease Progression: Evidence from the Chronic Renal Insufficiency (CRIC) Study
Jing Zhang, Tobias Fuhrer, Hongping Ye, B. Kwan +15 more
2022American Journal of Nephrology38 citations Open access
Semantic Scholar
Capacity for instantaneous catabolism of preferred and non-preferred carbon sources in Escherichia coli and Bacillus subtilis
M. Buffing, H. Link, Dimitris Christodoulou, U. Sauer
2018Scientific Reports36 citations Open access
Semantic Scholar
Metabolic reprogramming of Pseudomonas aeruginosa by phage-based quorum sensing modulation.
H. Hendrix, M. Zimmermann-Kogadeeva, Michael Zimmermann, U. Sauer +10 more
2022Cell Reports34 citations Open access
Semantic Scholar
Model-based integration of genomics and metabolomics reveals SNP functionality in Mycobacterium tuberculosis
O. Øyås, S. Borrell, Andrej Trauner, Michael Zimmermann +6 more
2019Proceedings of the National Academy of Sciences of the United States of America34 citations Open access
Semantic Scholar
Historical contingencies and phage induction diversify bacterioplankton communities at the microscale
Rachel E. Szabo, Sammy Pontrelli, J. Grilli, Julia A. Schwartzman +3 more
2022Proceedings of the National Academy of Sciences of the United States of America33 citations Open access
Semantic Scholar
Hidden resources in the Escherichia coli genome restore PLP synthesis and robust growth after deletion of the essential gene pdxB
J. Kim, J. Flood, Michael Kristofich, Cyrus Gidfar +8 more
2019Proceedings of the National Academy of Sciences of the United States of America32 citations Open access
Semantic Scholar
Non-enzymatic acetylation inhibits glycolytic enzymes in Escherichia coli.
E. Schastnaya, P. Doubleday, Luca Maurer, U. Sauer
2023Cell Reports26 citations Open access
Semantic Scholar

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