Researcher profile · Semantic Scholar

Julie Guy

h-index: 17
Works: 38
Citations: 1,809

Most-cited papers

Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges
A. Gouin, A. Bretaudeau, Kiwoong Nam, Sylvie Gimenez +61 more
2017Scientific Reports301 citations Open access
Semantic Scholar
Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication
J. Legras, Virginie Galeote, F. Bigey, Carole Camarasa +11 more
2018Molecular biology and evolution195 citations Open access
Semantic Scholar
Transposition favors the generation of large effect mutations that may facilitate rapid adaption
Leandro Quadrana, M. Etcheverry, Arthur Gilly, Erwann Caillieux +8 more
2019Nature Communications176 citations Open access
Semantic Scholar
Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes
Romain Blanc-Mathieu, L. Perfus-Barbeoch, J. Aury, M. da Rocha +17 more
2017PLoS Genetics176 citations Open access
Semantic Scholar
A population genomics insight into the Mediterranean origins of wine yeast domestication
Pedro Almeida, Raquel Barbosa, P. Zalar, Yumi Imanishi +10 more
2015Molecular Ecology162 citations
Semantic Scholar
Evolutionary Advantage Conferred by an Eukaryote-to-Eukaryote Gene Transfer Event in Wine Yeasts
S. Marsit, Adriana Mena, F. Bigey, F. Sauvage +6 more
2015Molecular biology and evolution150 citations Open access
Semantic Scholar
Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle
C. Murat, Thibaut Payen, B. Noël, A. Kuo +46 more
2018Nature Ecology & Evolution116 citations Open access
Semantic Scholar
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition
A. Alberti, J. Poulain, S. Engelen, K. Labadie +44 more
2017Scientific Data93 citations Open access
Semantic Scholar
Identification of Novel Target Genes for Safer and More Specific Control of Root-Knot Nematodes from a Pan-Genome Mining
E. Danchin, M. Arguel, A. Campan-Fournier, L. Perfus-Barbeoch +9 more
2013PLoS Pathogens91 citations Open access
Semantic Scholar
Recurrent DNA virus domestication leading to different parasite virulence strategies
A. Pichon, Annie Bézier, S. Urbach, J. Aury +17 more
2015Science Advances84 citations Open access
Semantic Scholar
Dual RNA-seq reveals Meloidogyne graminicola transcriptome and candidate effectors during the interaction with rice plants.
A. Petitot, A. Dereeper, M. Agbessi, C. da Silva +3 more
2016Molecular plant pathology58 citations Open access
Semantic Scholar
Virus-host coexistence in phytoplankton through the genomic lens
Sheree Yau, Marc Krasovec, S. Rombauts, M. Groussin +14 more
2019Science Advances53 citations Open access
Semantic Scholar
Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation
E. Gaulin, M. Pel, L. Camborde, Hélène San-Clemente +16 more
2018BMC Biology50 citations Open access
Semantic Scholar
Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition
Caroline Belser, J. Poulain, K. Labadie, F. Gavory +81 more
2022Scientific Data27 citations Open access
Semantic Scholar
TE-Tracker: systematic identification of transposition events through whole-genome resequencing
Arthur Gilly, M. Etcheverry, Mohammed-Amin Madoui, Julie Guy +10 more
2014BMC Bioinformatics25 citations Open access
Semantic Scholar
The Transcriptomes of Xiphinema index and Longidorus elongatus Suggest Independent Acquisition of Some Plant Parasitism Genes by Horizontal Gene Transfer in Early-Branching Nematodes
E. Danchin, L. Perfus-Barbeoch, Corinne Rancurel, P. Thorpe +11 more
2017Genes22 citations Open access
Semantic Scholar
Analyses of the Root-Knot Nematode (Meloidogyne graminicola) Transcriptome during Host Infection Highlight Specific Gene Expression Profiling in Resistant Rice Plants
A. Petitot, A. Dereeper, C. da Silva, Julie Guy +1 more
2020Pathogens18 citations Open access
Semantic Scholar
Transposon accumulation lines uncover histone H2A.Z-driven integration bias towards environmentally responsive genes
Leandro Quadrana, M. Etcheverry, Arthur Gilly, Erwann Caillieux +8 more
2018bioRxiv6 citations Open access
Semantic Scholar
Identiﬁcation of novel target genes for safer and more speciﬁc control of root-knot nematodes from a pan-genome mining
Étienne G. J. Danchin, M. Arguel, A. Fournier, Laetitia Zurletto +11 more
3 citations
Semantic Scholar
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition v1
Adriana Not Provided Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
2018protocols.io2 citations Open access
Semantic Scholar
Peculiar hybrid genomes of devastating plant pests promote plasticity in the absence of sex and meiosis
Romain Blanc-Mathieu, L. Perfus-Barbeoch, J. Aury, M. da Rocha +15 more
2016bioRxiv2 citations Open access
Semantic Scholar
Omics exploration of deep-sea biodiversity: data from the “Pourquoi Pas les Abysses?” and eDNAbyss projects
S. Arnaud-Haond, B. Trouche, C. Liautard-Haag, Karine Alain +41 more
2025Scientific Data1 citations Open access
Semantic Scholar
Handling of genomics samples
A. Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
20201 citations Open access
Semantic Scholar
Bioflavour: natural flavours and fragrances by yeasts and other microorganisms - the holistic approach of the BIOFLAVOUR Consortium.
J. Legras, Anna-Lisa Coi, F. Bigey, Virginie Galeote +8 more
20151 citations
Semantic Scholar
Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation
E. Gaulin, M. Pel, L. Camborde, Hélène San-Clemente +16 more
2018BMC Biology0 citations Open access
Semantic Scholar
DNA and RNA backups v1
Adriana Not Provided Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
2018protocols.io0 citations Open access
Semantic Scholar
Sequencing library preparation v1
Adriana Not Provided Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
2018protocols.io0 citations Open access
Semantic Scholar
Sequencing and data quality control v1
Adriana Not Provided Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
2018protocols.io0 citations Open access
Semantic Scholar
18S and 16S rRNA genes amplicon generation for eukaryotic and prokaryotic metabarcoding v1
Adriana Not Provided Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
2018protocols.io0 citations Open access
Semantic Scholar
Handling of genomics samples v1
Adriana Not Provided Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
2018protocols.io0 citations Open access
Semantic Scholar
Nucleic acids preparations v1
Adriana Not Provided Alberti, J. Poulain, S. Engelen, K. Labadie +45 more
2018protocols.io0 citations Open access
Semantic Scholar
Horizontal Gene Transfer is a key mechanism permitting adaptation of S. cerevisiae to its ecological niches
Virginie Galeote, J. Legras, F. Bigey, S. Marsit +7 more
20170 citations
Semantic Scholar
Adaptation of Yeast to Anthropogenic Environments Using Comparative Genomics
J. Legras, Virginie Galeote, Anna-Lisa Coi, F. Bigey +11 more
20170 citations
Semantic Scholar
Using genomic tools to unravel parasitic wasp genome evolution via acquisition of viral genomes
A. Volkoff, J. Drezen, S. Urbach, A. Pichon +10 more
20150 citations
Semantic Scholar
dadi input file used to infer demographic history of Wine and MO populations
Pedro Almeida, Raquel Barbosa, P. Zalar, Yumi Imanishi +10 more
20150 citations
Semantic Scholar
Exploring the adaptation of yeast to wine making environment using comparative genomics
J. Legras, F. Bigey, Virginie Galeote, S. Marsit +6 more
20150 citations
Semantic Scholar
Acquisition of viruses as a driver in endoparasitic ichneumonid wasp evolution
A. Pichon, S. Urbach, Annie Bézier, J. Aury +9 more
20140 citations
Semantic Scholar
Origine évolutive des “Virus-like particles” de Venturia canescens
Apolline Pichon, S. Urbach, J. Aury, Annie Bézier +11 more
20140 citations
Semantic Scholar

S. Engelen

×13

Caroline Belser×12

A. Couloux×12

J. Poulain×11

S. Romac×10

S. Gas×10

E'krame Jacoby×10

Gaelle Samson×10