A. Fontenot

Most-cited papers

Comparison of the respiratory microbiome in healthy nonsmokers and smokers.
A. Morris, J. Beck, P. Schloss, T. Campbell +16 more
2013American Journal of Respiratory and Critical Care Medicine745 citations Open access
Semantic Scholar
Alterations in the gut microbiota associated with HIV-1 infection
C. Lozupone, Marcella Li, T. Campbell, S. Flores +5 more
2013Cell Host and Microbe457 citations Open access
Semantic Scholar
γδ T cells protect against lung fibrosis via IL-22
P. Simonian, Fabian Wehrmann, Christina L. Roark, W. Born +2 more
2010Journal of Experimental Medicine248 citations Open access
Semantic Scholar
Widespread colonization of the lung by Tropheryma whipplei in HIV infection.
C. Lozupone, A. Cota-Gomez, B. Palmer, Derek J. Linderman +25 more
2013American Journal of Respiratory and Critical Care Medicine195 citations Open access
Semantic Scholar
An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men
Abigail J. S. Armstrong, Michael Shaffer, Nichole M. Nusbacher, C. Griesmer +8 more
2018Microbiome157 citations Open access
Semantic Scholar
HIV-induced alteration in gut microbiota
C. Lozupone, M. Rhodes, C. Neff, A. Fontenot +2 more
2014Gut microbes149 citations Open access
Semantic Scholar
Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals.
J. Beck, P. Schloss, A. Venkataraman, Homer L. Twigg +21 more
2015American Journal of Respiratory and Critical Care Medicine139 citations Open access
Semantic Scholar
An official American Thoracic Society statement: diagnosis and management of beryllium sensitivity and chronic beryllium disease.
J. Balmes, J. L. Abraham, R. Dweik, E. Fireman +9 more
2014American Journal of Respiratory and Critical Care Medicine127 citations
Semantic Scholar
Regulation of Virus-Specific CD4+ T Cell Function by Multiple Costimulatory Receptors during Chronic HIV Infection
A. Kassu, Roland A. Marcus, Michelle D’Souza, Elizabeth A Kelly-McKnight +5 more
2010Journal of Immunology126 citations Open access
Semantic Scholar
Crystal structure of HLA-DP2 and implications for chronic beryllium disease
S. Dai, G. A. Murphy, F. Crawford, D. Mack +4 more
2010Proceedings of the National Academy of Sciences of the United States of America118 citations Open access
Semantic Scholar
Genetic, Immunologic, and Environmental Basis of Sarcoidosis.
D. Moller, B. Rybicki, N. Hamzeh, C. Montgomery +3 more
2017Annals of the American Thoracic Society107 citations Open access
Semantic Scholar
In vivo blockade of the PD-1 receptor suppresses HIV-1 viral loads and improves CD4+ T cell levels in humanized mice
B. Palmer, C. Neff, J. LeCureux, Angelica C. Ehler +5 more
2012Journal of Immunology106 citations Open access
Semantic Scholar
Cytomegalovirus-specific T cell reactivity in biliary atresia at the time of diagnosis is associated with deficits in regulatory T cells
Stephen M. Brindley, Allison M. Lanham, Frederick M. Karrer, Rebecca M. Tucker +2 more
2012Hepatology106 citations Open access
Semantic Scholar
Structural Basis of Chronic Beryllium Disease: Linking Allergic Hypersensitivity and Autoimmunity
G. Clayton, Yang Wang, F. Crawford, Andrey Novikov +8 more
2014Cell105 citations Open access
Semantic Scholar
SARS-CoV-2-specific T cells associate with inflammation and reduced lung function in pulmonary post-acute sequalae of SARS-CoV-2
Katherine M. Littlefield, R. Watson, J. Schneider, C. Neff +7 more
2022PLoS Pathogens94 citations Open access
Semantic Scholar
Interplay of innate and adaptive immunity in metal-induced hypersensitivity
A. McKee, A. Fontenot
2016Current Opinion in Immunology69 citations Open access
Semantic Scholar
Altered Immune Phenotype in Peripheral Blood Cells of Patients with Scleroderma-Associated Pulmonary Hypertension
M. Risbano, Christina A. Meadows, C. Coldren, Tiffany J. Jenkins +7 more
2010Clinical and Translational Science64 citations Open access
Semantic Scholar
γδ T cells and Th17 cytokines in Hypersensitivity Pneumonitis and Lung Fibrosis
P. Simonian, Christina L. Roark, W. Born, R. O'Brien +1 more
2009Translational Research: The Journal of Laboratory and Clinical Medicine58 citations Open access
Semantic Scholar
Identification of shared TCR sequences from T cells in human breast cancer using emulsion RT-PCR
D. Munson, C. Egelston, K. Chiotti, Z. Parra +16 more
2016Proceedings of the National Academy of Sciences of the United States of America55 citations Open access
Semantic Scholar
Identification of beryllium-dependent peptides recognized by CD4+ T cells in chronic beryllium disease
M. Falta, C. Pinilla, D. Mack, Alex N Tinega +10 more
2013Journal of Experimental Medicine55 citations Open access
Semantic Scholar
Defective Leukocyte GM-CSF Receptor (CD116) Expression and Function in Inflammatory Bowel Disease
Jonathan I. Goldstein, Douglas J. Kominsky, Nicole Jacobson, Brittelle E. Bowers +8 more
2011Gastroenterology55 citations Open access
Semantic Scholar
Beryllium-Induced Hypersensitivity: Genetic Susceptibility and Neoantigen Generation
A. Fontenot, M. Falta, J. Kappler, S. Dai +1 more
2016Journal of Immunology54 citations Open access
Semantic Scholar
CD4+ T cells in the lungs of acute sarcoidosis patients recognize an Aspergillus nidulans epitope
Sarah A. Greaves, Avinash Ravindran, Radleigh G. Santos, Lan Chen +11 more
2021Journal of Experimental Medicine51 citations Open access
Semantic Scholar
Lymphocytic alveolitis is associated with the accumulation of functionally impaired HIV-specific T cells in the lung of antiretroviral therapy-naive subjects.
C. P. Neff, J. Chain, S. MaWhinney, Allison K. Martin +5 more
2015American Journal of Respiratory and Critical Care Medicine50 citations Open access
Semantic Scholar
Occupational interstitial lung diseases
P. Spagnolo, C. Ryerson, S. Guler, Johanna Feary +8 more
2023Journal of Internal Medicine40 citations Open access
Semantic Scholar
Adaptive Immunity in Pulmonary Sarcoidosis and Chronic Beryllium Disease
Sarah A. Greaves, Shaikh M. Atif, A. Fontenot
2020Frontiers in Immunology40 citations Open access
Semantic Scholar
Th2 CD4+ T Cells Are Necessary and Sufficient for Schistosoma‐Pulmonary Hypertension
Rahul Kumar, C. Mickael, B. Kassa, L. Sanders +10 more
2019Journal of the American Heart Association : Cardiovascular and Cerebrovascular Disease36 citations Open access
Semantic Scholar
Regulatory T cells modulate granulomatous inflammation in an HLA-DP2 transgenic murine model of beryllium-induced disease
D. Mack, M. Falta, A. McKee, Allison K. Martin +9 more
2014Proceedings of the National Academy of Sciences of the United States of America36 citations Open access
Semantic Scholar
Use of bronchoalveolar lavage to assess the respiratory microbiome: signal in the noise.
Homer L. Twigg, A. Morris, E. Ghedin, J. Curtis +10 more
2013The Lancet Respiratory Medicine34 citations
Semantic Scholar
Chronic Beryllium Disease, HLA-DPB1, and the DP Peptide Binding Groove
L. Silveira, E. McCanlies, T. Fingerlin, M. V. Van Dyke +8 more
2012Journal of Immunology33 citations Open access
Semantic Scholar
Mechanisms Underlying HIV-Associated Noninfectious Lung Disease.
R. Presti, S. Flores, B. Palmer, J. Atkinson +6 more
2017Chest32 citations Open access
Semantic Scholar
Pulmonary Macrophage Cell Death in Lung Health and Disease.
Abigail M Shotland, A. Fontenot, A. McKee
2020American Journal of Respiratory Cell and Molecular Biology29 citations Open access
Semantic Scholar
MyD88 Dependence of Beryllium-Induced Dendritic Cell Trafficking and CD4+ T Cell Priming
A. McKee, D. Mack, F. Crawford, A. Fontenot
2015Mucosal Immunology28 citations Open access
Semantic Scholar
Beryllium-Specific CD4+ T Cells in Blood as a Biomarker of Disease Progression
Allison K. Martin, D. Mack, M. Falta, M. Mroz +3 more
2011Journal of Allergy and Clinical Immunology26 citations Open access
Semantic Scholar
Immunologic Effects of Beryllium Exposure
A. Fontenot
2018Annals of the American Thoracic Society24 citations Open access
Semantic Scholar
Identification of Multiple Public T Cell Receptor Repertoires in Chronic Beryllium Disease
N. Bowerman, M. Falta, D. Mack, Fabian Wehrmann +5 more
2014Journal of Immunology24 citations Open access
Semantic Scholar
T Cell Recognition of Beryllium
S. Dai, M. Falta, N. Bowerman, A. McKee +1 more
2013Current Opinion in Immunology24 citations Open access
Semantic Scholar
Mutagenesis of beryllium-specific T cell receptors suggests an unusual binding topology for antigen recognition
N. Bowerman, M. Falta, D. Mack, J. Kappler +1 more
2011Journal of Immunology22 citations Open access
Semantic Scholar
Decreased 4-1BB Expression on HIV-Specific CD4+ T Cells is Associated with Sustained Viral Replication and Reduced IL-2 Production
A. Kassu, Michelle D’Souza, B. O'Connor, Elizabeth A Kelly-McKnight +3 more
2009Clinical Immunology22 citations Open access
Semantic Scholar
Protective role of B cells in sterile particulate-induced lung injury.
Shaikh M. Atif, D. Mack, A. McKee, J. Rangel-Moreno +6 more
2019JCI Insight21 citations Open access
Semantic Scholar
Single-cell RNA sequencing identifies macrophage transcriptional heterogeneities in granulomatous diseases
S. Liao, Shaikh M. Atif, K. Mould, I. Konigsberg +6 more
2021European Respiratory Journal20 citations Open access
Semantic Scholar
Shared αβ T Cell Receptor Usage in Lungs of Sarcoidosis Patients with Löfgren’s Syndrome
A. M. Mitchell, Ylva Kaiser, M. Falta, D. Munson +6 more
2017Journal of Immunology20 citations Open access
Semantic Scholar
Deficient and dysfunctional regulatory T cells in the lungs of chronic beryllium disease subjects.
D. Mack, Allison M. Lanham, M. Falta, B. Palmer +2 more
2010American Journal of Respiratory and Critical Care Medicine20 citations Open access
Semantic Scholar
Linking genetic susceptibility and T cell activation in beryllium-induced disease.
M. Falta, N. Bowerman, S. Dai, J. Kappler +1 more
2010Proceedings of the American Thoracic Society19 citations Open access
Semantic Scholar
TLR9 and IL1R1 promote mobilization of pulmonary dendritic cells during beryllium sensitization
Morgan F Wade, Morgan K. Collins, D. Richards, D. Mack +4 more
2018Journal of Immunology17 citations Open access
Semantic Scholar
Beryllium-specific CD4+ T cells induced by chemokine neoantigens perpetuate inflammation.
M. Falta, J. Crawford, Alex N Tinega, L. Landry +12 more
2021Journal of Clinical Investigation16 citations Open access
Semantic Scholar
A role for TNFalpha in alveolar macrophage damange-associated molecular pattern release.
Morgan K. Collins, Abigail M Shotland, Morgan F Wade, Shaikh M. Atif +6 more
2020JCI Insight16 citations Open access
Semantic Scholar
Disruption of monocyte-macrophage differentiation and trafficking by a heme analog during active inflammation
Rachel E. M. Schaefer, R. Callahan, Shaikh M. Atif, D. Orlicky +4 more
2021Mucosal Immunology15 citations Open access
Semantic Scholar
Infliximab therapy modulates an antigen-specific immune response in chronic beryllium disease.
L. Maier, B. Barkes, M. Mroz, M. Rossman +8 more
2012Respiratory Medicine15 citations Open access
Semantic Scholar
Impaired Function of CTLA-4 in the Lungs of Patients with Chronic Beryllium Disease Contributes to Persistent Inflammation
J. Chain, Allison K. Martin, D. Mack, L. Maier +2 more
2013Journal of Immunology14 citations Open access
Semantic Scholar