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J. Atkinson · SciRah

Researcher profile · Semantic Scholar

J. Atkinson

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J. Atkinson — researcher profile on SciRah

h-index: 28
Works: 80
Citations: 3,492

Most-cited papers

Matrix metalloproteinase-9 in lung remodeling.
J. Atkinson, R. M. Senior
2003American Journal of Respiratory Cell and Molecular Biology629 citations
Semantic Scholar
Standardizing nasal nitric oxide measurement as a test for primary ciliary dyskinesia.
M. Leigh, M. Hazucha, K. Chawla, B. Baker +18 more
2013Annals of the American Thoracic Society246 citations Open access
Semantic Scholar
Matrix metalloproteinase-9 activates TGF-β and stimulates fibroblast contraction of collagen gels.
Tetsu Kobayashi, Huijung Kim, Xiang-De D. Liu, H. Sugiura +9 more
2014American Journal of Physiology - Lung cellular and Molecular Physiology228 citations Open access
Semantic Scholar
PARP9-DTX3L ubiquitin ligase targets host histone H2BJ and viral 3C protease to enhance interferon signaling and control viral infection
Yong Zhang, D. Mao, W. T. Roswit, Xiaohua Jin +15 more
2015Nature Immunology214 citations Open access
Semantic Scholar
De Novo Mutations in FOXJ1 Result in a Motile Ciliopathy with Hydrocephalus and Randomization of Left/Right Body Asymmetry.
J. Wallmeier, Diana Frank, A. Shoemark, Tabea Nöthe-Menchen +26 more
2019American Journal of Human Genetics189 citations Open access
Semantic Scholar
The immune landscape in tuberculosis reveals populations linked to disease and latency
E. Esaulova, Shibali Das, D. Singh, J. Choreño-Parra +17 more
2020Cell Host and Microbe173 citations Open access
Semantic Scholar
The role of matrix metalloproteinase-9 in cigarette smoke-induced emphysema.
J. Atkinson, Barbara A. Lutey, Yoko Suzuki, Holly M. Toennies +11 more
2011American Journal of Respiratory and Critical Care Medicine136 citations Open access
Semantic Scholar
A Site on Laminin α5, AQARSAASKVKVSMKF, Induces Inflammatory Cell Production of Matrix Metalloproteinase-9 and Chemotaxis1
Tracy L. Adair-Kirk, J. Atkinson, T. Broekelmann, M. Doi +4 more
2003Journal of Immunology105 citations Open access
Semantic Scholar
Chemokine receptor 2-targeted molecular imaging in pulmonary fibrosis
S. Brody, S. P. Gunsten, Hannah P. Luehmann, D. Sultan +23 more
2020bioRxiv92 citations Open access
Semantic Scholar
Membrane‐type 1 matrix metalloproteinase is required for normal alveolar development
J. Atkinson, Kenn Holmbeck, S. Yamada, H. Birkedal-Hansen +2 more
2005Developmental Dynamics88 citations Open access
Semantic Scholar
Oxidative Damage to Nucleic Acids in Severe Emphysema
G. Deslée, J. C. Woods, C. Moore, S. Conradi +8 more
2008Chest86 citations Open access
Semantic Scholar
Clara cell adhesion and migration to extracellular matrix
J. Atkinson, Tracy L. Adair-Kirk, D. Kelley, D. Demello +1 more
2008Respiratory Research82 citations Open access
Semantic Scholar
Panton-Valentine Leukocidin-positive methicillin-resistant Staphylococcus aureus lung infection in patients with cystic fibrosis.
A. Elizur, Rachel C. Orscheln, T. Ferkol, J. Atkinson +6 more
2007Chest82 citations
Semantic Scholar
Identification of kidney injury released circulating osteopontin as causal agent of respiratory failure
F. Z. Khamissi, Liang Ning, E. Kefaloyianni, Dun Hao +9 more
2022Science Advances81 citations Open access
Semantic Scholar
Cigarette smoke induces nucleic-acid oxidation in lung fibroblasts.
G. Deslée, Tracy L. Adair-Kirk, T. Betsuyaku, J. C. Woods +10 more
2010American Journal of Respiratory Cell and Molecular Biology80 citations Open access
Semantic Scholar
Oxidative stress activates MMP‐2 in cultured human coronary smooth muscle cells
F. Valentin, J. Bueb, P. Kieffer, E. Tschirhart +1 more
2005Fundamental & Clinical Pharmacology74 citations
Semantic Scholar
Microfibril-associated Glycoprotein 2 (MAGP2) Loss of Function Has Pleiotropic Effects in Vivo*
Michelle D. Combs, Russell H Knutsen, T. Broekelmann, Holly M. Toennies +8 more
2013Journal of Biological Chemistry70 citations Open access
Semantic Scholar
Lumacaftor/ivacaftor in patients with cystic fibrosis and advanced lung disease homozygous for F508del-CFTR.
J. Taylor-Cousar, M. Jain, T. Barto, T. Haddad +6 more
2017Journal of Cystic Fibrosis67 citations Open access
Semantic Scholar
Distal airways in mice exposed to cigarette smoke: Nrf2-regulated genes are increased in Clara cells.
Tracy L. Adair-Kirk, J. Atkinson, G. L. Griffin, M. Watson +4 more
2008American Journal of Respiratory Cell and Molecular Biology67 citations Open access
Semantic Scholar
DIAGNOSTIC YIELD OF NASAL SCRAPE BIOPSIES IN PRIMARY CILIARY DYSKINESIA: A MULTICENTER EXPERIENCE
J. Olin, K. Burns, Johnny L. Carson, Hilda Metjian +11 more
2011Pediatric Pulmonology66 citations Open access
Semantic Scholar
PET-based imaging of Chemokine receptor-2 in experimental and disease-related lung inflammation
Yongjian Liu, S. P. Gunsten, D. Sultan, Hannah P. Luehmann +11 more
2017Radiology54 citations Open access
Semantic Scholar
Matrix metalloproteinase-14 mediates a phenotypic shift in the airways to increase mucin production.
H. Deshmukh, A. McLachlan, J. Atkinson, W. Hardie +7 more
2009American Journal of Respiratory and Critical Care Medicine53 citations Open access
Semantic Scholar
Macrophage chitinase 1 stratifies chronic obstructive lung disease.
E. Agapov, J. T. Battaile, Rose M. Tidwell, R. Hachem +4 more
2009American Journal of Respiratory Cell and Molecular Biology52 citations Open access
Semantic Scholar
A Chemotactic Peptide from Laminin α5 Functions as a Regulator of Inflammatory Immune Responses via TNFα-mediated Signaling1
Tracy L. Adair-Kirk, J. Atkinson, D. Kelley, R. Arch +2 more
2005Journal of Immunology49 citations
Semantic Scholar
Membrane type 1 matrix metalloproteinase is necessary for distal airway epithelial repair and keratinocyte growth factor receptor expression after acute injury.
J. Atkinson, Holly M. Toennies, Kenn Holmbeck, R. M. Senior
2007American Journal of Physiology - Lung cellular and Molecular Physiology47 citations
Semantic Scholar
A chemotactic peptide from laminin alpha 5 functions as a regulator of inflammatory immune responses via TNF alpha-mediated signaling.
Tracy L. Adair-Kirk, J. Atkinson, D. Kelley, R. Arch +2 more
2005Journal of Immunology36 citations
Semantic Scholar
Mechanisms Underlying HIV-Associated Noninfectious Lung Disease.
R. Presti, S. Flores, B. Palmer, J. Atkinson +6 more
2017Chest32 citations Open access
Semantic Scholar
Accurate measurement of small airways on low-dose thoracic CT scans in smokers.
B. A. Lutey, S. Conradi, J. Atkinson, Jie Zheng +3 more
2013Chest32 citations Open access
Semantic Scholar
Single Nucleus RNASeq Profiling of Mouse Lung: Reduced Dissociation Bias and Improved Rare Cell Type Detection Compared with Single Cell RNASeq.
J. Koenitzer, Haojia Wu, J. Atkinson, S. Brody +1 more
2020American Journal of Respiratory Cell and Molecular Biology27 citations Open access
Semantic Scholar
Cardiovascular , Pulmonary , and Renal Pathology MT 1-MMP – Dependent Remodeling of Cardiac Extracellular Matrix Structure and Function Following Myocardial Infarction
Gerald Koenig, R. Rowe, Sharlene M. Day, F. Sabeh +3 more
201225 citations
Semantic Scholar
Laterality Defects in Primary Ciliary Dyskinesia: Relationship to Ultrastructural Defect or Genotype.
A. Barber, A. Shapiro, S. Davis, T. Ferkol +13 more
2022Annals of the American Thoracic Society23 citations
Semantic Scholar
Macrophage NOX2 NADPH oxidase maintains alveolar homeostasis in mice.
S. Bhattacharya, Rachel A. Idol, Wei Yang, J. D. Rojas-Márquez +8 more
2022Blood21 citations Open access
Semantic Scholar
TNF or EGFR inhibition equally block AKI-to-CKD transition: opportunities for etanercept treatment.
Mai M Abdelmageed, E. Kefaloyianni, Akshayakeerthi Arthanarisami, Y. Komaru +2 more
2022Nephrology, Dialysis and Transplantation21 citations Open access
Semantic Scholar
AGE-DEPENDENT REDUCTION IN ASTHMATIC PATHOLOGY THROUGH REPROGAMMING OF POST-VIRAL INFLAMMATORY RESPONSES
G. Hazan, Anna Eubanks, Carrie Gierasch, J. Atkinson +18 more
2022Journal of Immunology20 citations Open access
Semantic Scholar
Activation of metalloproteinase-2, loss of matrix scleroprotein content and coronary artery calcification.
P. Kieffer, Philippe Giummelly, Bruno Schjoth, J. Carteaux +3 more
2001Atherosclerosis20 citations
Semantic Scholar
Single-Nucleus RNA-Sequencing Pro ﬁ ling of Mouse Lung Reduced Dissociation Bias and Improved Rare Cell-Type Detection Compared with Single-Cell RNA Sequencing
J. Koenitzer, Haojia Wu, J. Atkinson, S. Brody +1 more
202019 citations
Semantic Scholar
Smoke particulates stress lung cells
Tracy L. Adair-Kirk, J. Atkinson, R. M. Senior
2008Nature Medicine18 citations
Semantic Scholar
Measuring Small Airways in Transverse CT Images: Correction for Partial Volume Averaging and Airway Tilt
S. Conradi, B. A. Lutey, J. Atkinson, Wei Wang +2 more
2010Academic Radiology14 citations Open access
Semantic Scholar
Decreased aortic smooth muscle contraction in a rat model of multibacterial sepsis
Changhua Wang, Arnaud Mansard, P. Giummelly, J. Atkinson
2004Fundamental & Clinical Pharmacology14 citations
Semantic Scholar
FDG PET imaging in cystic fibrosis.
Delphine L. Chen, J. Atkinson, T. Ferkol
2013Seminars in nuclear medicine13 citations
Semantic Scholar
Metalloproteinase‐9 in circulating monocytes in pulmonary hypertension
Caroline Cantini-Salignac, I. Lartaud, F. Schrijen, J. Atkinson +1 more
2006Fundamental & Clinical Pharmacology10 citations
Semantic Scholar
Selective Imaging of Lung Macrophages Using [11C]PBR28-Based Positron Emission Tomography
Delphine L. Chen, E. Agapov, Kangyun Wu, Jacquelyn T. Engle +11 more
2021Molecular Imaging and Biology9 citations Open access
Semantic Scholar
Reproducibility Of Positron Emission Tomography (PET)-Measured [18F]Fluorodeoxyglucose ([18F]FDG) Uptake As A Marker Of Lung Inflammation In Chronic Obstructive Pulmonary Disease (COPD)
Delphine L. Chen, D. Azulay, J. Atkinson, Roger J. Yusen +9 more
2011Asian Test Symposium6 citations
Semantic Scholar
Significant Interference in Mass Cytometry from Medicinal Iodine in Human Lung.
B. Keller, R. Presti, D. Byers, J. Atkinson
2016American Journal of Respiratory Cell and Molecular Biology5 citations Open access
Semantic Scholar
Visualizing CCR2-Mediated Inflammation in Pulmonary Fibrosis
J. Atkinson, S. P. Gunsten, Hannah P. Luehmann, D. Sultan +5 more
2019C34. ILD AND IPF: CLINICAL AND MECHANISTIC STUDIES4 citations
Semantic Scholar
Definition Of Clinical Criteria For Diagnosis Of Primary Ciliary Dyskinesia
M. Leigh, A. Shapiro, J. Pittman, S. Davis +10 more
2012Asian Test Symposium4 citations
Semantic Scholar
Clinical Symptoms Associated With Primary Ciliary Dyskinesia : Results Of A Multi-Centered Study
A. Shapiro, S. Davis, K. Olivier, T. Ferkol +7 more
2010Asian Test Symposium3 citations
Semantic Scholar
Modulating Pseudomonas aeruginosa chronic Inflammation With The Anti-PcrV Antibody KB001: Results Of A Pilot Clinical and Pharmacodynamic Study In Subjects With Cystic Fibrosis
C. Milla, F. Accurso, J. Chmiel, K. McCoy +13 more
2010Asian Test Symposium3 citations
Semantic Scholar
Epithelial Repair and Regeneration
S. Brody, J. Atkinson
2010Molecular Pathology of Lung Diseases3 citations Open access
Semantic Scholar
Single nucleus RNASeq profiling of mouse lung: reduced dissociation bias and improved detection of rare cell types compared with single cell RNASeq
J. Koenitzer, Haojia Wu, J. Atkinson, S. Brody +1 more
2020bioRxiv2 citations Open access
Semantic Scholar

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