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E. Flemington · SciRah

Researcher profile · Semantic Scholar

E. Flemington

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E. Flemington — researcher profile on SciRah

h-index: 52
Works: 191
Citations: 8,386

Most-cited papers

The Epstein Barr virus circRNAome
Nathan A. Ungerleider, Monica Concha, Zhen Lin, Claire Roberts +11 more
2018PLoS Pathogens130 citations Open access
Semantic Scholar
A Positive Role of c-Myc in Regulating Androgen Receptor and its Splice Variants in Prostate Cancer
S. Bai, Su-Bing Cao, Lian-Jin Jin, Margaret M Kobelski +12 more
2019Oncogene97 citations Open access
Semantic Scholar
A comprehensive approach to expression of L1 loci
P. Deininger, M. Morales, T. White, M. Baddoo +8 more
2016Nucleic Acids Research95 citations Open access
Semantic Scholar
Global transcript structure resolution of high gene density genomes through multi-platform data integration
Tina M. O’Grady, Xia Wang, Kerstin Höner zu Bentrup, M. Baddoo +2 more
2016Nucleic Acids Research92 citations Open access
Semantic Scholar
Comparative Analysis of Gammaherpesvirus Circular RNA Repertoires: Conserved and Unique Viral Circular RNAs
Nathan A. Ungerleider, Vaibhav Jain, Yi-Ping Wang, N. Maness +16 more
2018Journal of Virology74 citations Open access
Semantic Scholar
Nerve growth factor receptor negates the tumor suppressor p53 as a feedback regulator
Xiaoping Zhou, Q. Hao, P. Liao, Shi-Wen Luo +9 more
2016eLife69 citations Open access
Semantic Scholar
A comprehensive next generation sequencing-based virome assessment in brain tissue suggests no major virus - tumor association
Michael J. Strong, Eugene E. Blanchard, Zhen Lin, C. Morris +4 more
2016Acta Neuropathologica Communications62 citations Open access
Semantic Scholar
Transcriptome analysis reveals sexual disparities in gene expression in rat brain microvessels
Partha K. Chandra, Sinisa Cikic, M. Baddoo, I. Rutkai +4 more
2021Journal of Cerebral Blood Flow and Metabolism59 citations Open access
Semantic Scholar
Transactivation of human endogenous retrovirus K (HERV-K) by KSHV promotes Kaposi’s Sarcoma development
L. Dai, L. Del Valle, W. Miley, D. Whitby +3 more
2018Oncogene58 citations Open access
Semantic Scholar
Detection of Epstein-Barr Virus Infection in Non-Small Cell Lung Cancer
F. Kheir, Mengmeng Zhao, Michael J. Strong, Yi Yu +6 more
2019Cancers57 citations Open access
Semantic Scholar
Interplay Between Cytoplasmic and Nuclear Androgen Receptor Splice Variants Mediate Castration Resistance
Y. Zhan, Guan-Yi Zhang, Xiaojie Wang, Yan-Feng Qi +8 more
2016Molecular Cancer Research55 citations Open access
Semantic Scholar
New Noncoding Lytic Transcripts Derived from the Epstein-Barr Virus Latency Origin of Replication, oriP, Are Hyperedited, Bind the Paraspeckle Protein, NONO/p54nrb, and Support Viral Lytic Transcription
Su-Bing Cao, Walter N. Moss, Tina M. O’Grady, Monica Concha +9 more
2015Journal of Virology55 citations Open access
Semantic Scholar
SON and its alternatively spliced isoforms control MLL complex-mediated H3K4me3 and transcription of leukemia-associated genes
Jung-Hyun Kim, M. Baddoo, E. Park, Joshua K. Stone +10 more
2016Molecules and Cells49 citations Open access
Semantic Scholar
MALT1 inhibition is efficacious in both naïve and ibrutinib-resistant chronic lymphocytic leukemia
N. Saba, Deanna H. Wong, G. Tanios, Jessica R Iyer +11 more
2017Cancer Research47 citations Open access
Semantic Scholar
SON drives oncogenic RNA splicing in glioblastoma by regulating PTBP1/PTBP2 switching and RBFOX2 activity
Jung-Hyun Kim, Kyuho Jeong, Jianfeng Li, James M. Murphy +9 more
2021Nature Communications43 citations Open access
Semantic Scholar
Somatic mutations in the DNA repairome in prostate cancers in African Americans and Caucasians
Santosh Yadav, M. Anbalagan, M. Baddoo, V. Chellamuthu +6 more
2020Oncogene42 citations Open access
Semantic Scholar
Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
Wensheng Zhang, Andrea Edwards, E. Flemington, Kun Zhang
2017Scientific Reports42 citations Open access
Semantic Scholar
Secreted Oral Epithelial Cell Membrane Vesicles Induce Epstein-Barr Virus Reactivation in Latently Infected B Cells
Zhen Lin, K. Swan, Xin Zhang, Su-Bing Cao +10 more
2016Journal of Virology39 citations Open access
Semantic Scholar
Circular RNAs add diversity to androgen receptor isoform repertoire in castration-resistant prostate cancer
Su-Bing Cao, Tianfang Ma, Nathan A. Ungerleider, Claire Roberts +17 more
2019Oncogene38 citations Open access
Semantic Scholar
Reduced mitochondrial activity in colonocytes facilitates AMPKα2‐dependent inflammation
S. Heller, Harrison M. Penrose, Chloe Cable, Debjani Biswas +5 more
2017The FASEB Journal36 citations Open access
Semantic Scholar
Induction of a novel isoform of the lncRNA HOTAIR in Claudin‐low breast cancer cells attached to extracellular matrix
Miao Li, Xi Li, Yan Zhuang, E. Flemington +2 more
2017Molecular Oncology35 citations Open access
Semantic Scholar
High-fat diet induced leptin and Wnt expression: RNA-sequencing and pathway analysis of mouse colonic tissue and tumors
Harrison M Penrose, S. Heller, Chloe Cable, Hani Nakhoul +4 more
2017Carcinogenesis34 citations Open access
Semantic Scholar
Latent Expression of the Epstein-Barr Virus (EBV)-Encoded Major Histocompatibility Complex Class I TAP Inhibitor, BNLF2a, in EBV-Positive Gastric Carcinomas
Michael J. Strong, Thomas C Laskow, Hani Nakhoul, Eugene E. Blanchard +6 more
2015Journal of Virology34 citations Open access
Semantic Scholar
EBV miRNAs are potent effectors of tumor cell transcriptome remodeling in promoting immune escape
Nathan A. Ungerleider, Whitney L. Bullard, M. Kara, Xia Wang +4 more
2020bioRxiv33 citations Open access
Semantic Scholar
Exposure of Mycobacterium marinum to low-shear modeled microgravity: effect on growth, the transcriptome and survival under stress
C. Abshire, K. Prasai, Israel Soto, R. Shi +6 more
2016npj Microgravity30 citations Open access
Semantic Scholar
Integrative Genomics and Transcriptomics Analysis Reveals Potential Mechanisms for Favorable Prognosis of Patients with HPV-Positive Head and Neck Carcinomas
Wensheng Zhang, Andrea Edwards, Zhide Fang, E. Flemington +1 more
2016Scientific Reports29 citations Open access
Semantic Scholar
Genome-wide Transcript Structure Resolution Reveals Abundant Alternate Isoform Usage from Murine Gammaherpesvirus 68
Tina M. O’Grady, A. Feswick, Brett A. Hoffman, Yi-Ping Wang +5 more
2019Cell Reports27 citations Open access
Semantic Scholar
Gene network analysis reveals a novel 22-gene signature of carbon metabolism in hepatocellular carcinoma
Jin-Qiang Zhang, M. Baddoo, Chang Han, Michael J. Strong +5 more
2016OncoTarget26 citations Open access
Semantic Scholar
RNA-sequencing study of peripheral blood monocytes in chronic periodontitis
Yao-Zhong Liu, P. Maney, J. Puri, Yu Zhou +5 more
2016Gene25 citations Open access
Semantic Scholar
The impact of oil spill to lung health – insights from an RNA-seq study of human airway epithelial cells
Yao-Zhong Liu, A. M. Roy-Engel, M. Baddoo, E. Flemington +2 more
2015Gene24 citations Open access
Semantic Scholar
Gammaherpesvirus RNAs Come Full Circle
Nathan A. Ungerleider, Scott A. Tibbetts, R. Renne, E. Flemington
2019mBio23 citations Open access
Semantic Scholar
Defining the dynamic chromatin landscape of mouse nephron progenitors
Sylvia A. Hilliard, Ren-Fang Song, Hong-Bing Liu, Chao-Hui Chen +7 more
2019Biology Open23 citations Open access
Semantic Scholar
Assessment of viral RNA in idiopathic pulmonary fibrosis using RNA-seq
Qinyan Yin, Michael J. Strong, Yan Zhuang, E. Flemington +3 more
2020BMC Pulmonary Medicine21 citations Open access
Semantic Scholar
In-depth characterization of a new patient-derived xenograft model for metaplastic breast carcinoma to identify viable biologic targets and patterns of matrix evolution within rare tumor types
M. Matossian, T. Chang, M. Wright, H. Burks +29 more
2021Clinical and Translational Oncology20 citations Open access
Semantic Scholar
Significant Prognostic Features and Patterns of Somatic TP53 Mutations in Human Cancers
Wensheng Zhang, Andrea Edwards, E. Flemington, Kun Zhang
2017Cancer Informatics20 citations Open access
Semantic Scholar
Transcriptomic analysis of KSHV-infected primary oral fibroblasts: The role of interferon-induced genes in the latency of oncogenic virus
L. Dai, Li-Hua Bai, Zhen Lin, J. Qiao +4 more
2016OncoTarget20 citations Open access
Semantic Scholar
Interaction of Epstein-Barr virus genes with human gastric carcinoma transcriptome
Ruiyuan Zhang, Michael J. Strong, M. Baddoo, Zhen Lin +3 more
2017OncoTarget19 citations Open access
Semantic Scholar
Ribonucleotide reductase represents a novel therapeutic target in primary effusion lymphoma
L. Dai, Zhen Lin, J. Qiao, Yihan Chen +2 more
2017Oncogene19 citations Open access
Semantic Scholar
Methylation status and AP1 elements are involved in EBV-mediated miR-155 expression in EBV positive lymphoma cells
Qinyan Yin, Xia Wang, Claire Roberts, E. Flemington +1 more
2016Virology19 citations Open access
Semantic Scholar
Increased transcription and high translation efficiency lead to accumulation of androgen receptor splice variant after androgen deprivation therapy
Tianfang Ma, S. Bai, Yan-Feng Qi, Y. Zhan +8 more
2021Cancer Letters18 citations Open access
Semantic Scholar
SpliceTools, a suite of downstream RNA splicing analysis tools to investigate mechanisms and impact of alternative splicing
E. Flemington, Samuel A. Flemington, Tina M. O’Grady, M. Baddoo +3 more
2023Nucleic Acids Research17 citations Open access
Semantic Scholar
High-Throughput Sequence Analysis of Peripheral T-Cell Lymphomas Indicates Subtype-Specific Viral Gene Expression Patterns and Immune Cell Microenvironments
Hani Nakhoul, Zhen Lin, Xia Wang, Claire Roberts +2 more
2019Msphere17 citations Open access
Semantic Scholar
Transferring knowledge of bacterial protein interaction networks to predict pathogen targeted human genes and immune signaling pathways: a case study on M. tuberculosis
Suyu Mei, E. Flemington, Kun Zhang
2018BMC Genomics17 citations Open access
Semantic Scholar
SEER and Gene Expression Data Analysis Deciphers Racial Disparity Patterns in Prostate Cancer Mortality and the Public Health Implication
Wensheng Zhang, Yan Dong, O. Sartor, E. Flemington +1 more
2020Scientific Reports15 citations Open access
Semantic Scholar
TFIIS.h, a new target of p53, regulates transcription efficiency of pro-apoptotic bax gene
Jun-Ming Liao, B. Cao, Jun Deng, Xiang Zhou +5 more
2016Scientific Reports15 citations Open access
Semantic Scholar
Ebola virus delta peptide is an enterotoxin.
L. Melnik, S. Guha, Jenisha Ghimire, A. Smither +9 more
2022Cell Reports13 citations Open access
Semantic Scholar
Mutant TP53 disrupts age-related accumulation patterns of somatic mutations in multiple cancer types
Wensheng Zhang, E. Flemington, Kun Zhang
2016Cancer Genetics13 citations Open access
Semantic Scholar
Arsenic trioxide inhibits EBV reactivation and promotes cell death in EBV-positive lymphoma cells
Qinyan Yin, Mark D. Sides, C. Parsons, E. Flemington +1 more
2017Virology Journal12 citations Open access
Semantic Scholar
Maintenance of AP-2-Dependent Functional Activities of Nef Restricts Pathways of Immune Escape from CD8 T Lymphocyte Responses
Blake Schouest, A. Weiler, S. Janaka, T. A. Myers +9 more
2017Journal of Virology12 citations Open access
Semantic Scholar
In colonic ρ0 (rho0) cells reduced mitochondrial function mediates transcriptomic alterations associated with cancer
Harrison M Penrose, S. Heller, Chloe Cable, Hani Nakhoul +6 more
2017Oncoscience12 citations Open access
Semantic Scholar

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