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S. Bai · SciRah

Researcher profile · Semantic Scholar

S. Bai

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S. Bai — researcher profile on SciRah

h-index: 27
Works: 92
Citations: 3,837

Most-cited papers

Delineating copy number and clonal substructure in human tumors from single-cell transcriptomes
Ruli Gao, S. Bai, Y. Henderson, Yi-Yun Lin +13 more
2021Nature Biotechnology779 citations Open access
Semantic Scholar
Targeting MET and AXL overcomes resistance to sunitinib therapy in renal cell carcinoma
Lijun Zhou, Xian-De Liu, Mianen Sun, Xue-Song Zhang +16 more
2015Oncogene368 citations Open access
Semantic Scholar
The PI3K/AKT Pathway and Renal Cell Carcinoma
Hui Guo, P. Germán, S. Bai, S. Barnes +7 more
2015Journal of genetics and genomics = Yi chuan xue bao330 citations Open access
Semantic Scholar
A spatially resolved single-cell genomic atlas of the adult human breast
T. Kumar, Kevin Nee, Run-Min Wei, Siyuan He +36 more
2023Nature231 citations Open access
Semantic Scholar
Spatial charting of single cell transcriptomes in tissues
Run-Min Wei, Siyuan He, S. Bai, Emi Sei +5 more
2021Nature Biotechnology227 citations Open access
Semantic Scholar
Breast Tumors Maintain a Reservoir of Subclonal Diversity During Expansion
Darlan C. Minussi, Michael D. Nicholson, Hanghui Ye, Alexander Davis +23 more
2021Nature209 citations Open access
Semantic Scholar
Androgen receptor splice variants dimerize to transactivate target genes
Duo Xu, Y. Zhan, Yan-Feng Qi, B. Cao +9 more
2015Cancer Research189 citations Open access
Semantic Scholar
Resistance to anti-angiogenic therapy is associated with an immunosuppressive tumor microenvironment in metastatic renal cell carcinoma
Xian-De Liu, A. Hoang, Lijun Zhou, S. Kalra +19 more
2015Cancer immunology research171 citations Open access
Semantic Scholar
Anaplastic transformation in thyroid cancer revealed by single-cell transcriptomics
Lina Lu, J. Wang, Y. Henderson, S. Bai +19 more
2023Journal of Clinical Investigation116 citations Open access
Semantic Scholar
A Positive Role of c-Myc in Regulating Androgen Receptor and its Splice Variants in Prostate Cancer
S. Bai, Su-Bing Cao, Lian-Jin Jin, Margaret M Kobelski +12 more
2019Oncogene97 citations Open access
Semantic Scholar
NF-κB, but not p38 MAP Kinase, Is Required for TNF-α–induced Expression of Cell Adhesion Molecules in Endothelial Cells
Suja S. Rajan, Jian-Min Ye, S. Bai, Fa-Qing Huang +1 more
2008Journal of Cellular Biochemistry97 citations Open access
Semantic Scholar
Autophagy mediates HIF2α degradation and suppresses renal tumorigenesis
Xian-De Liu, Jun Yao, D. Tripathi, Z. Ding +16 more
2014Oncogene84 citations Open access
Semantic Scholar
Site Specific Activation of AKT Protects Cells from Death Induced by Glucose Deprivation
Meng Gao, Jiyong Liang, Yi-Ling Lu, Hui Guo +6 more
2013Oncogene80 citations Open access
Semantic Scholar
Comparative Analysis of Gammaherpesvirus Circular RNA Repertoires: Conserved and Unique Viral Circular RNAs
Nathan A. Ungerleider, Vaibhav Jain, Yi-Ping Wang, N. Maness +16 more
2018Journal of Virology74 citations Open access
Semantic Scholar
Single cell sequencing reveals trajectory of tumor-infiltrating lymphocyte states in pancreatic cancer
A. Schalck, Donastas Sakellariou-Thompson, M. Forget, Emi Sei +16 more
2022Cancer Discovery70 citations Open access
Semantic Scholar
Mesenchymal and stem-like prostate cancer linked to therapy-induced lineage plasticity and metastasis
Hyunho Han, Yan Wang, J. Curto, Sreeharsha Gurrapu +21 more
2022Cell Reports69 citations Open access
Semantic Scholar
Interplay Between Cytoplasmic and Nuclear Androgen Receptor Splice Variants Mediate Castration Resistance
Y. Zhan, Guan-Yi Zhang, Xiaojie Wang, Yan-Feng Qi +8 more
2016Molecular Cancer Research55 citations Open access
Semantic Scholar
Archival single cell genomics reveals persistent subclones during DCIS progression
Kaile Wang, T. Kumar, Junke Wang, Darlan C. Minussi +28 more
2023Cell54 citations Open access
Semantic Scholar
CUDC‐907, a novel dual PI3K and HDAC inhibitor, in prostate cancer: Antitumour activity and molecular mechanism of action
Cheng-Qi Hu, Hongyan Xia, S. Bai, Jianlei Zhao +8 more
2020Journal of Cellular and Molecular Medicine48 citations Open access
Semantic Scholar
AKT isoform-specific expression and activation across cancer lineages
Jue Wang, Wei Zhao, Hui Guo, Yong Fang +15 more
2018BMC Cancer43 citations Open access
Semantic Scholar
Coordinate phosphorylation of multiple residues on single AKT1 and AKT2 molecules
Hui Guo, Meng Gao, Yiling Lu, Jiyong Liang +9 more
2013Oncogene41 citations Open access
Semantic Scholar
Normal Breast Tissues Harbor Rare Populations of Aneuploid Epithelial Cells
Yi-Yun Lin, Junke Wang, Kaile Wang, S. Bai +17 more
2024Nature37 citations
Semantic Scholar
Conditioned media from endothelial progenitor cells cultured in simulated microgravity promote angiogenesis and bone fracture healing
Lingchi Kong, Yan Wang, Haixing Wang, Qi Pan +6 more
2021Stem cell research & therapeutics36 citations Open access
Semantic Scholar
Simple oligonucleotide-based multiplexing of single cell chromatin accessibility
Kaile Wang, Zhenna Xiao, Yun Yan, R. Ye +8 more
2021Molecules and Cells29 citations Open access
Semantic Scholar
FoxO1 overexpression reduces Aβ production and tau phosphorylation in vitro.
Wei Zhang, S. Bai, Jianhua Yang, Yimin Zhang +8 more
2020Neuroscience Letters28 citations
Semantic Scholar
HNF1B loss exacerbates the development of chromophobe renal cell carcinomas
Mianen Sun, P. Tong, W. Kong, B. Dong +19 more
2017Cancer Research27 citations Open access
Semantic Scholar
Reactivation of methylation-silenced tumor suppressor gene p16INK4a by nordihydroguaiaretic acid and its implication in G1 cell cycle arrest.
Yi Cui, Cai-Ling Lu, Li-Yong Liu, Da-Guang Sun +4 more
2008Life Science27 citations
Semantic Scholar
5-Hydroxymethylcytosine as a potential epigenetic biomarker in papillary thyroid carcinoma
Meng-Ying Tong, Shu-Hang Gao, Wen-Jing Qi, Chang Shi +8 more
2019Oncology Letters24 citations Open access
Semantic Scholar
Genetic and Pharmacological Strategies to Refunctionalize the von Hippel Lindau R167Q Mutant Protein
Z. Ding, P. Germán, S. Bai, A. Reddy +9 more
2014Cancer Research22 citations Open access
Semantic Scholar
Impact of taxanes on androgen receptor signaling
S. Bai, Bryan Y Zhang, Yan Dong
2018Asian Journal of Andrology20 citations Open access
Semantic Scholar
Increased transcription and high translation efficiency lead to accumulation of androgen receptor splice variant after androgen deprivation therapy
Tianfang Ma, S. Bai, Yan-Feng Qi, Y. Zhan +8 more
2021Cancer Letters18 citations Open access
Semantic Scholar
Comparative transcriptomic and proteomic analyses proved IFN-λ1 is a more potent inducer of ISGs than IFN-α against porcine epidemic diarrhea virus in porcine intestinal epithelia cells.
Mingzhi Zhao, Liang Li, Lin-Hui Zhai, Q. Yue +12 more
2020Journal of Proteome Research18 citations
Semantic Scholar
Coalescing single cell genomes and transcriptomes to decode breast cancer progression
Kaile Wang, Rui Ye, S. Bai, Zhenna Xiao +11 more
2025Cell17 citations Open access
Semantic Scholar
Agents that Stabilize Mutated von Hippel Lindau Protein Result in Differential Post-Translational Modification and Subcellular Localization
Z. Ding, P. Germán, S. Bai, Zhe-Hui Feng +6 more
2012Journal of biomolecular screening14 citations Open access
Semantic Scholar
Decoding the evolutionary response to prostate cancer therapy by plasma genome sequencing
N. Ramesh, Emi Sei, Pei-Ching Tsai, S. Bai +6 more
2020Genome Biology13 citations Open access
Semantic Scholar
Phosphorylation-dependent cleavage regulates von Hippel Lindau proteostasis and function
P. Germán, S. Bai, Xian-De Liu, Mianen Sun +8 more
2016Oncogene13 citations Open access
Semantic Scholar
Raddeanin A down‐regulates androgen receptor and its splice variants in prostate cancer
Hongyan Xia, Cheng-Qi Hu, S. Bai, Jing Lyu +5 more
2019Journal of Cellular and Molecular Medicine12 citations Open access
Semantic Scholar
Role of GDF15 in methylseleninic acid-mediated inhibition of cell proliferation and induction of apoptosis in prostate cancer cells
Wenbo Zhang, Cheng-Qi Hu, Xiaojie Wang, S. Bai +5 more
2019PLoS ONE12 citations Open access
Semantic Scholar
Resolving clonal substructure from single cell genomic data using CopyKit
Darlan C. Minussi, Emi Sei, Junke Wang, A. Schalck +15 more
2022bioRxiv10 citations Open access
Semantic Scholar
Longitudinal Profiling of Circulating Tumor DNA Reveals the Evolutionary Dynamics of Metastatic Prostate Cancer During Serial Therapy
Yuehui Zhao, Naveen Ramesh, Ping Xu, Emi Sei +8 more
2025Cancer Research9 citations
Semantic Scholar
Results of a high-throughput screen to identify compounds that modulate VHL proteostasis.
Z. Ding, P. Germán, S. Bai, Meng Gao +4 more
2012Journal of Clinical Oncology9 citations
Semantic Scholar
Ecotypes of triple-negative breast cancer in response to chemotherapy
Yun Yan, Yi-Yun Lin, T. Kumar, S. Bai +19 more
2026Nature7 citations Open access
Semantic Scholar
The impact of breast radiotherapy on the tumor genome and immune ecosystem.
A. Schalck, Tuan M. Tran, Jianzhuo Li, Emi Sei +23 more
2025Cell Reports7 citations Open access
Semantic Scholar
Delineating the copy-number substructure of metastatic tumors with CopyKit.
Junke Wang, Darlan C. Minussi, Alexander Davis, Run-Min Wei +17 more
2026Molecules and Cells5 citations
Semantic Scholar
Dissociation of Nuclear Suspensions from Human Breast Tissues v1
Emi Sei, S. Bai, Nicholas E. Navin
2018protocols.io4 citations Open access
Semantic Scholar
Dissociation of Single Cell Suspensions from Human Breast Tissues v1
S. Bai, Emi Sei, N. E.
2018protocols.io2 citations Open access
Semantic Scholar
Sunitinib to upregulate IFNg-STAT1 signaling and to increase indoleamine 2,3-dioxygenase (IDO) expression in renal cell carcinoma (RCC).
E. Jonasch, A. Hoang, Mianen Sun, Lijun Zhou +5 more
20162 citations
Semantic Scholar
Transcriptional Inactivation of TP53 and the BMP Pathway Mediates Therapy-induced Dedifferentiation and Metastasis in Prostate Cancer
Hyunho Han, Yan Wang, J. Curto, Sreeharsha Gurrapu +20 more
2021bioRxiv1 citations Open access
Semantic Scholar
Abstract PO-133: Breast tumors maintain a reservoir of subclonal diversity during primary expansion
Darlan C. Minussi, Michael D. Nicholson, Hanghui Ye, Alexander Davis +17 more
20201 citations
Semantic Scholar
Abstract 312: Autophagy mediates HIF2α degradation and suppresses renal tumorigenesis
Xian-De Liu, Jun Yao, D. Tripathi, Z. Ding +14 more
20141 citations
Semantic Scholar

Frequent co-authors

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Emi Sei×17
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Emi Sei — researcher profile on SciRah
Z. Ding×14
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Z. Ding — researcher profile on SciRah
Min Hu×13
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Min Hu — researcher profile on SciRah
E. Jonasch×13
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P. Germán — researcher profile on SciRah

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N. Navin — researcher profile on SciRah

Anna Casasent×9

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Lijun Zhou — researcher profile on SciRah

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Xian-De Liu — researcher profile on SciRah

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Yan Dong — researcher profile on SciRah

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A. Schalck — researcher profile on SciRah

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Mianen Sun — researcher profile on SciRah