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Uria Alcolombri · SciRah

Researcher profile · Semantic Scholar

Uria Alcolombri

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Uria Alcolombri — researcher profile on SciRah

h-index: 17
Works: 47
Citations: 1,206

Most-cited papers

Identification of the algal dimethyl sulfide–releasing enzyme: A missing link in the marine sulfur cycle
Uria Alcolombri, S. Ben-Dor, E. Feldmesser, Y. Levin +2 more
2015Science230 citations
Semantic Scholar
Global warming accelerates soil heterotrophic respiration
Alon Nissan, Uria Alcolombri, N. Peleg, Nir Galili +3 more
2023Nature Communications168 citations Open access
Semantic Scholar
Microbes contribute to setting the ocean carbon flux by altering the fate of sinking particulates
Trang T. H. Nguyen, E. Zakem, A. Ebrahimi, Julia A. Schwartzman +8 more
2022Nature Communications92 citations Open access
Semantic Scholar
Sinking enhances the degradation of organic particles by marine bacteria
Uria Alcolombri, François J. Peaudecerf, Vicente I. Fernandez, Lars Behrendt +2 more
2021Nature Geoscience90 citations Open access
Semantic Scholar
Directed evolution of sulfotransferases and paraoxonases by ancestral libraries.
Uria Alcolombri, M. Elias, Dan S. Tawfik
2011Journal of Molecular Biology69 citations
Semantic Scholar
Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
K. Lee, Fátima C. Pereira, Márton Palatinszky, Lars Behrendt +4 more
2020Nature Protocols67 citations
Semantic Scholar
Single-cell stable isotope probing in microbial ecology
Uria Alcolombri, Roberto Pioli, R. Stocker, D. Berry
2022ISME Communications54 citations Open access
Semantic Scholar
DddD is a CoA-transferase/lyase producing dimethyl sulfide in the marine environment.
Uria Alcolombri, P. Laurino, Pedro Lara-Astiaso, A. Vardi +1 more
2014Biochemistry53 citations
Semantic Scholar
Strong chemotaxis by marine bacteria towards polysaccharides is enhanced by the abundant organosulfur compound DMSP
Estelle E. Clerc, J. Raina, Johannes M. Keegstra, Zachary C. Landry +14 more
2023Nature Communications45 citations Open access
Semantic Scholar
Dimethyl sulfide mediates microbial predator–prey interactions between zooplankton and algae in the ocean
Adva Shemi, Uria Alcolombri, D. Schatz, Viviana Farstey +6 more
2021Nature Microbiology42 citations Open access
Semantic Scholar
Encounter rates between bacteria and small sinking particles
J. Słomka, Uria Alcolombri, E. Secchi, R. Stocker +1 more
2019New Journal of Physics39 citations Open access
Semantic Scholar
MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data
K. Lee, Zachary C. Landry, Awais Athar, Uria Alcolombri +57 more
2024Nature Microbiology37 citations Open access
Semantic Scholar
The ultra-high affinity transport proteins of ubiquitous marine bacteria
B. Clifton, Uria Alcolombri, Gen-Ichiro Uechi, C. Jackson +1 more
2024Nature34 citations Open access
Semantic Scholar
The Dimethylsulfoniopropionate (DMSP) Lyase and Lyase-Like Cupin Family Consists of Bona Fide DMSP lyases as Well as Other Enzymes with Unknown Function.
L. Lei, Kesava Phaneendra Cherukuri, Uria Alcolombri, Diana Meltzer +1 more
2018Biochemistry24 citations
Semantic Scholar
Microbial dietary preference and interactions affect the export of lipids to the deep ocean
Lars Behrendt, Uria Alcolombri, Jonathan E. Hunter, S. Smriga +10 more
2024Science20 citations Open access
Semantic Scholar
Ambiguous evidence for assigning DddQ as a dimethylsulfoniopropionate lyase and oceanic dimethylsulfide producer
Uria Alcolombri, M. Elias, A. Vardi, Dan S. Tawfik
2014Proceedings of the National Academy of Sciences of the United States of America18 citations Open access
Semantic Scholar
Random encounters and amoeba locomotion drive the predation of Listeria monocytogenes by Acanthamoeba castellanii
Frédéric de Schaetzen, Mingzhen Fan, Uria Alcolombri, François J. Peaudecerf +4 more
2022Proceedings of the National Academy of Sciences of the United States of America17 citations Open access
Semantic Scholar
Biochemical Characterization of a Novel Redox-Regulated Metacaspase in a Marine Diatom
Shiri Graff van Creveld, S. Ben-Dor, Avia Mizrachi, Uria Alcolombri +4 more
2021Frontiers in Microbiology17 citations Open access
Semantic Scholar
Assigning the Algal Source of Dimethylsulfide Using a Selective Lyase Inhibitor.
Uria Alcolombri, L. Lei, Diana Meltzer, A. Vardi +1 more
2017ACS Chemical Biology17 citations
Semantic Scholar
Using High-Sensitivity Lipidomics To Assess Microscale Heterogeneity in Oceanic Sinking Particles and Single Phytoplankton Cells.
Jonathan E. Hunter, H. Fredricks, Lars Behrendt, Uria Alcolombri +3 more
2021Environmental Science and Technology14 citations
Semantic Scholar
Encounter rates prime interactions between microorganisms
J. Słomka, Uria Alcolombri, F. Carrara, R. Foffi +3 more
2023Interface Focus13 citations Open access
Semantic Scholar
The geologic history of marine dissolved organic carbon from iron oxides
Nir Galili, S. Bernasconi, Alon Nissan, Uria Alcolombri +17 more
2025Nature11 citations Open access
Semantic Scholar
Reactive Transport with Fluid–Solid Interactions in Dual-Porosity Media
A. Nissan, Uria Alcolombri, Frédéric de Schaetzen, B. Berkowitz +1 more
2020ACS ES&T Water9 citations Open access
Semantic Scholar
A redox-regulated type III metacaspase controls cell death in a marine diatom
Shiri Graff van Creveld, S. Ben-Dor, Avia Mizrachi, Uria Alcolombri +4 more
2018bioRxiv6 citations Open access
Semantic Scholar
Biogel scavenging slows the sinking of organic particles to the ocean depths
Uria Alcolombri, Alon Nissan, J. Słomka, Sam Charlton +9 more
2025Nature Communications5 citations Open access
Semantic Scholar
Bacterial chemotaxis to saccharides is governed by a trade-off between sensing and uptake
Noele Norris, Uria Alcolombri, Johannes M. Keegstra, Y. Yawata +5 more
2021bioRxiv4 citations Open access
Semantic Scholar
Ultrahigh-affinity transport proteins from ubiquitous marine bacteria reveal mechanisms and global patterns of nutrient uptake
B. Clifton, Uria Alcolombri, C. Jackson, P. Laurino
2023bioRxiv3 citations Open access
Semantic Scholar
Biochemical Profiling of DMSP Lyases.
L. Lei, Uria Alcolombri, Dan S. Tawfik
2018Methods in Enzymology3 citations
Semantic Scholar
DddY is a bacterial dimethylsulfoniopropionate lyase representing a new cupin enzyme superfamily with unknown primary function
L. Lei, Uria Alcolombri, Dan S. Tawfik
2017bioRxiv3 citations Open access
Semantic Scholar
Bacterial iron acquisition by Escherichia coli is facilitated by amino acid complexation in a rapid-renewal environment
Juanita Lara-Gutiérrez, Jen Nguyen, M. McIlvin, Ichiko Sugiyama +9 more
2026Proceedings of the National Academy of Sciences of the United States of America2 citations Open access
Semantic Scholar
Growth in Low Carbon Conditions Reveals Amino-Acid-Coupled Iron Uptake
Juanita Lara-Gutiérrez, Jen Nguyen, M. McIlvin, Ichiko Sugiyama +9 more
2025bioRxiv1 citations Open access
Semantic Scholar
Dimethyl sulfide acts as eat-me signal during microbial predator-prey interactions in the ocean
Adva Shemi, Uria Alcolombri, D. Schatz, Viviana Farstey +5 more
20211 citations Open access
Semantic Scholar
A Continuous Culture Millifluidic Device for the Study of Escherichia coli under Low and Fluctuating Nutrient Conditions.
Juanita Lara-Gutiérrez, K. Lee, Jen Nguyen, Zachary C. Landry +4 more
2026Journal of Visualized Experiments0 citations
Semantic Scholar
Exploring Intracellular Se Speciation in Marine Phytoplankton by LC-ICP-MS/MS: from Se Enrichments to Extraction and Chromatographic Techniques
P. Béziat, Sylvain Bouchet, J. Tolu, Uria Alcolombri +1 more
2026Biological Trace Element Research0 citations Open access
Semantic Scholar
The coccosphere of the heavy calcifying coccolithophore Coccolithus braarudii provides defense against bacteria
Sophie T. Zweifel, R. Henshaw, Roberto Pioli, Clara Martínez-Pérez +3 more
2026Communications Biology0 citations Open access
Semantic Scholar
Alteromonas macleodii breaches the diatom frustule triggering protoplast emergence and programmed necrosis-like death in Thalassiosira rotula
Isobel Short, Clara Martínez-Pérez, S. Miravet-Verde, S. Sunagawa +2 more
2026Nature Communications0 citations Open access
Semantic Scholar
Guardians of the cell: The coccosphere prevents bacterial attack in a heavy calcifying coccolithophore
Sophie T. Zweifel, R. Henshaw, Roberto Pioli, Clara Martínez-Pérez +3 more
2025bioRxiv0 citations
Semantic Scholar
Bacteria induce an amoeboid phase in coccolithophores that persists after bloom collapse
Sophie T. Zweifel, R. Henshaw, O. Müller, Johannes M. Keegstra +6 more
2025bioRxiv0 citations Open access
Semantic Scholar
Author Correction: Biogel scavenging slows the sinking of organic particles to the ocean depths
Uria Alcolombri, Alon Nissan, J. Słomka, Sam Charlton +9 more
2025Nature Communications0 citations Open access
Semantic Scholar
Breaching the diatom frustule: Alteromonas macleodii triggers protoplast emergence and programmed necrotic-like cell death in the oceanic diatom Thalassiosira rotula
Isobel Short, Clara Martínez-Pérez, R. Stocker, Uria Alcolombri
2025bioRxiv0 citations Open access
Semantic Scholar
The geologic history of seawater DOC from marine iron oxides
Nir Galili, J. Hemingway, Stefano Bernasconi, T. Blattmann +9 more
2023Goldschmidt2023 abstracts0 citations Open access
Semantic Scholar
The role of phytoplankton in the marine biogeochemical cycle of Se
L. Winkel, P. Béziat, Zoé Le Bras, Sylvain Bouchet +2 more
2023Goldschmidt2023 abstracts0 citations Open access
Semantic Scholar
Microbial metabolic specificity controls pelagic lipid export efficiency
Lars Behrendt, Uria Alcolombri, Jonathan E. Hunter, S. Smriga +10 more
2023bioRxiv0 citations Open access
Semantic Scholar
Microbes contribute to setting the ocean carbon flux by altering the fate of sinking particulates
Trang T. H. Nguyen, E. Zakem, A. Ebrahimi, Julia A. Schwartzman +8 more
2022Nature Communications0 citations Open access
Semantic Scholar
Native or promiscuous? Analyzing putative dimethylsulfoniopropionate lyases using a substrate proofing approach
L. Lei, Kesava Phaneendra Cherukuri, Diana Meltzer, Uria Alcolombri +1 more
2017bioRxiv0 citations Open access
Semantic Scholar
Crystal structure of Ancestral variant b9 of SULT 1A1 in complex with PAP and p-nitrophenol
Uria Alcolombri, M. Elias, Dan S. Tawfik
20110 citations
Semantic Scholar
Biogel scavenging slows the sinking of organic particles to the ocean depths
Uria Alcolombri, M. Rau, David Fierli
0 citations
Semantic Scholar

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