G. Murshudov

Most-cited papers

The PDB_REDO server for macromolecular structure model optimization
R. Joosten, F. Long, G. Murshudov, A. Perrakis
2014IUCrJ793 citations Open access
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Structures of filaments from Pick’s disease reveal a novel tau protein fold
B. Falcon, Wen-Juan Zhang, A. Murzin, G. Murshudov +6 more
2018Nature736 citations Open access
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Single-particle cryo-EM at atomic resolution
T. Nakane, A. Kotecha, A. Sente, G. McMullan +20 more
2020Nature734 citations Open access
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Tools for macromolecular model building and refinement into electron cryo-microscopy reconstructions
Alan Brown, F. Long, R. Nicholls, J. Toots +2 more
2015Acta Crystallographica Section D: Biological Crystallography587 citations Open access
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The Structure of the Yeast Mitochondrial Large Ribosomal Subunit
Alan Brown, A. Amunts, Xiao-Chen Bai, J. Llácer +6 more
2014555 citations Open access
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The CCP4 suite: integrative software for macromolecular crystallography
J. Agirre, Mihaela Atanasova, Haroldas Bagdonas, C. Ballard +90 more
2023Acta Crystallographica Section D: Structural Biology519 citations Open access
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AceDRG: a stereochemical description generator for ligands
F. Long, R. Nicholls, P. Emsley, S. Gražulis +3 more
2017Acta Crystallographica Section D: Structural Biology328 citations Open access
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Cryo-EM single-particle structure refinement and map calculation using Servalcat
K. Yamashita, C. Palmer, T. Burnley, G. Murshudov
2021bioRxiv278 citations Open access
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Initiation of Translation by Cricket Paralysis Virus IRES Requires Its Translocation in the Ribosome
I. Fernández, Xiao-Chen Bai, G. Murshudov, S. Scheres +1 more
2014Cell243 citations Open access
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Overview of refinement procedures within REFMAC5: utilizing data from different sources
O. Kovalevskiy, R. Nicholls, F. Long, A. Carlon +1 more
2018Acta Crystallographica Section D: Structural Biology207 citations Open access
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DNA Topoisomerase Inhibitors: Trapping a DNA-Cleaving Machine in Motion
B. Bax, G. Murshudov, A. Maxwell, T. Germe
2019Journal of Molecular Biology108 citations Open access
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MutS/MutL crystal structure reveals that the MutS sliding clamp loads MutL onto DNA
F. Groothuizen, Ines Winkler, Michele Cristóvão, A. Fish +9 more
2015eLife103 citations Open access
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Current approaches for the fitting and refinement of atomic models into cryo-EM maps using CCP-EM
R. Nicholls, Michal Tykač, O. Kovalevskiy, G. Murshudov
2018Acta Crystallographica Section D: Structural Biology81 citations Open access
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Structures of actin-like ParM filaments show architecture of plasmid-segregating spindles
T. Bharat, G. Murshudov, C. Sachse, J. Löwe
2015Nature76 citations Open access
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Automated refinement of macromolecular structures at low resolution using prior information
O. Kovalevskiy, R. Nicholls, G. Murshudov
2016Acta Crystallographica Section D: Structural Biology64 citations Open access
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Outcome of the first wwPDB/CCDC/D3R Ligand Validation Workshop
P. Adams, K. Aertgeerts, C. Bauer, J. Bell +53 more
2016Structure60 citations Open access
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Structure of the Yeast Mitochondrial Large Ribosomal Subunit
A. Amunts, Alan Brown, Xiao-Chen Bai, J. Llácer +6 more
2014Science53 citations Open access
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Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).
P. Adams, P. Afonine, Kumaran Baskaran, H. Berman +31 more
2019Acta Crystallographica Section D: Structural Biology50 citations Open access
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Simultaneous use of solution NMR and X-ray data in REFMAC5 for joint refinement/detection of structural differences
M. Rinaldelli, E. Ravera, V. Calderone, G. Parigi +2 more
2014Acta Crystallographica Section D: Biological Crystallography46 citations Open access
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Robust background modelling in DIALS
J. Parkhurst, G. Winter, D. Waterman, L. Fuentes-Montero +3 more
2016Journal of Applied Crystallography36 citations Open access
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Structural basis of anticancer drug recognition and amino acid transport by LAT1
Yong-Chan Lee, C. Jin, Ryuichi Ohgaki, Minhui Xu +7 more
2023bioRxiv35 citations Open access
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Refinement of Atomic Structures Against cryo-EM Maps.
G. Murshudov
2016Methods in Enzymology34 citations
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EMDA: A Python package for Electron Microscopy Data Analysis
R. Warshamanage, K. Yamashita, G. Murshudov
2021bioRxiv30 citations Open access
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Interdigitated immunoglobulin arrays form the hyperstable surface layer of the extremophilic bacterium Deinococcus radiodurans
Andriko von Kügelgen, Sofie van Dorst, K. Yamashita, Danielle L. Sexton +4 more
2022bioRxiv29 citations Open access
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GEMMI and Servalcat restrain REFMAC5
K. Yamashita, M. Wojdyr, F. Long, R. Nicholls +1 more
2023Acta Crystallographica Section D: Structural Biology28 citations Open access
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Data mining of iron(II) and iron(III) bond-valence parameters, and their relevance for macromolecular crystallography
Heping Zheng, K. Langner, G. P. Shields, Jing Hou +4 more
2017Acta Crystallographica Section D: Structural Biology28 citations Open access
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How to tackle protein structural data from solution and solid state: An integrated approach.
A. Carlon, E. Ravera, W. Andrałojć, G. Parigi +2 more
2016Progress in nuclear magnetic resonance spectroscopy25 citations
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Post-translational modifications in the Protein Data Bank
Lucy C Schofield, Jordan S. Dialpuri, G. Murshudov, Jon Agirre
2024Acta Crystallographica Section D: Structural Biology21 citations Open access
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Community recommendations on cryoEM data archiving and validation
G. Kleywegt, P. Adams, S. J. Butcher, Catherine L. Lawson +43 more
2023IUCrJ21 citations Open access
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On the complementarity of X-ray and NMR data
A. Schirò, A. Carlon, G. Parigi, G. Murshudov +3 more
2020Journal of Structural Biology: X21 citations Open access
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Analysis and validation of macromolecular B values
R. C. Masmaliyeva, G. Murshudov
2019Acta Crystallographica Section D: Structural Biology17 citations Open access
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Joint X-ray/NMR structure refinement of multidomain/multisubunit systems
A. Carlon, E. Ravera, G. Parigi, G. Murshudov +1 more
2018Journal of Biomolecular NMR17 citations Open access
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Validation and extraction of molecular-geometry information from small-molecule databases
F. Long, R. Nicholls, P. Emsley, S. Gražulis +3 more
2017Acta Crystallographica Section D: Structural Biology16 citations Open access
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Data to knowledge: how to get meaning from your result
H. Berman, M. Gabanyi, C. R. Groom, John E. Johnson +7 more
2015IUCrJ14 citations Open access
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Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace
M. Heimhalt, A. Berndt, J. Wagstaff, M. Anandapadamanaban +12 more
2021bioRxiv13 citations Open access
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Modelling covalent linkages in CCP4
R. Nicholls, R. Joosten, F. Long, M. Wojdyr +6 more
2021Acta Crystallographica Section D: Structural Biology12 citations Open access
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Low Resolution Refinement of Atomic Models Against Crystallographic Data.
R. Nicholls, O. Kovalevskiy, G. Murshudov
2017Methods in molecular biology11 citations
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Background modelling of diffraction data in the presence of ice rings
J. Parkhurst, A. Thorn, M. Vollmar, G. Winter +5 more
2017IUCrJ10 citations Open access
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The missing link: covalent linkages in structural models
R. Nicholls, M. Wojdyr, R. Joosten, Lucrezia Catapano +4 more
2021Acta Crystallographica Section D: Structural Biology9 citations Open access
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Pathological macromolecular crystallographic data affected by twinning, partial-disorder and exhibiting multiple lattices for testing of data processing and refinement tools
I. Campeotto, A. Lebedev, A. Schreurs, L. Kroon-Batenburg +4 more
2018Scientific Reports9 citations Open access
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AUSPEX: a graphical tool for X-ray diffraction data analysis
A. Thorn, J. Parkhurst, P. Emsley, R. Nicholls +3 more
2017Acta Crystallographica Section D: Structural Biology9 citations Open access
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Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge
Catherine L. Lawson, A. Kryshtafovych, G. Pintilie, Stephen K. Burley +77 more
2024Nature Methods8 citations Open access
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Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge
Catherine L. Lawson, A. Kryshtafovych, G. Pintilie, Stephen K. Burley +77 more
2024Research Square8 citations Open access
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Local and global analysis of macromolecular atomic displacement parameters
R. C. Masmaliyeva, K. H. Babai, G. Murshudov
2020bioRxiv6 citations Open access
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Measurement of atomic scattering factors by cryoelectron microscopy
A. Shtyrov, Hugh Wilson, Daria Slowik, Keitaro Yamashita +8 more
2025bioRxiv4 citations Open access
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How Do Gepotidacin and Zoliflodacin Stabilize DNA-Cleavage Complexes with Bacterial Type IIA Topoisomerases? 2. A Single Moving Metal Mechanism
R. Nicholls, Harry Morgan, Anna J. Warren, Simon E. Ward +4 more
2024International Journal of Molecular Sciences4 citations Open access
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Improving macromolecular structure refinement with metal-coordination restraints
K. H. Babai, F. Long, Martin Malý, Keitaro Yamashita +1 more
2024Acta Crystallographica Section D: Structural Biology4 citations Open access
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A redox switch allows binding of Fe(II) and Fe(III) ions in the cyanobacterial iron-binding protein FutA from Prochlorococcus
R. Bolton, M. Machelett, Jack Stubbs, D. Axford +25 more
2023bioRxiv4 citations Open access
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3D-Strudel - a novel model-dependent map-feature validation method for high-resolution cryo-EM structures
Andrei Istrate, Zhe Wang, G. Murshudov, A. Patwardhan +1 more
2021bioRxiv4 citations Open access
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The predictive power of data-processing statistics
M. Vollmar, J. Parkhurst, Dominic Jaques, A. Baslé +3 more
2020IUCrJ4 citations Open access
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