M. Aurich

Most-cited papers

1. A community-driven global reconstruction of human metabolism

   I. Thiele, Neil Swainston, R. Fleming, A. Hoppe +42 more

   2013Nature Biotechnology1,081 citations Open access

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2. Creation and analysis of biochemical constraint-based models: the COBRA Toolbox v3.0

   Laurent Heirendt, Sylvain Arreckx, T. Pfau, Sebastián N. Mendoza +51 more

   2019Nature Protocols1,072 citations Open access

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3. Recon3D: A Resource Enabling A Three-Dimensional View of Gene Variation in Human Metabolism

   Elizabeth Brunk, Swagatika Sahoo, D. Zielinski, Ali Altunkaya +17 more

   2018Nature Biotechnology513 citations Open access

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4. Parkinson’s disease-associated alterations of the gut microbiome predict disease-relevant changes in metabolic functions

   Federico Baldini, Johannes Hertel, E. Sandt, C. Thinnes +110 more

   2020BMC Biology207 citations Open access

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5. Personalized whole‐body models integrate metabolism, physiology, and the gut microbiome

   I. Thiele, Swagatika Sahoo, A. Heinken, Johannes Hertel +3 more

   2020Molecular Systems Biology197 citations Open access

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6. Creation and analysis of biochemical constraint-based models: the COBRA Toolbox v3.0.

   Laurent Heirendt, Sylvain Arreckx, T. Pfau, Sebastián N. Mendoza +47 more

   2017168 citations

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7. Membrane transporters in a human genome-scale metabolic knowledgebase and their implications for disease

   Swagatika Sahoo, M. Aurich, J. Jonsson, I. Thiele

   2014Frontiers in Physiology75 citations Open access

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8. Prediction of intracellular metabolic states from extracellular metabolomic data

   M. Aurich, G. Paglia, Ó. Rolfsson, Sigrún Hrafnsdóttir +5 more

   2014Metabolomics67 citations Open access

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9. MetaboTools: A Comprehensive Toolbox for Analysis of Genome-Scale Metabolic Models

   M. Aurich, R. Fleming, I. Thiele

   2016Frontiers in Physiology51 citations Open access

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10. Computational Modeling of Human Metabolism and Its Application to Systems Biomedicine.

    M. Aurich, I. Thiele

    2016Methods in molecular biology36 citations

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11. When metabolism meets physiology: Harvey and Harvetta

    I. Thiele, Swagatika Sahoo, A. Heinken, Laurent Heirendt +3 more

    2018bioRxiv28 citations Open access

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12. A systems approach reveals distinct metabolic strategies among the NCI-60 cancer cell lines

    M. Aurich, R. Fleming, I. Thiele

    2017PLoS Comput. Biol.22 citations Open access

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13. Arterio-venous metabolomics exploration reveals major changes across liver and intestine in the obese Yucatan minipig

    N. Poupin, M. Tremblay-Franco, A. Amiel, C. Canlet +8 more

    2019Scientific Reports21 citations Open access

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14. Application of string similarity ratio and edit distance in automatic metabolite reconciliation comparing reconstructions and models

    M. Mednis, M. Aurich

    201218 citations Open access

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15. Contextualization Procedure and Modeling of Monocyte Specific TLR Signaling

    M. Aurich, I. Thiele

    2012PLoS ONE6 citations Open access

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16. Integration of omics data with biochemical reaction networks

    M. Aurich

    20150 citations

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17. Prediction of intracellular metabolic states from extracellular metabolomic data

    M. Aurich, G. Paglia, Ó. Rolfsson, Sigrún Hrafnsdóttir +5 more

    2014Metabolomics0 citations Open access

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