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Y. Ivarsson · SciRah

Researcher profile · Semantic Scholar

Y. Ivarsson

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Y. Ivarsson — researcher profile on SciRah

h-index: 29
Works: 111
Citations: 4,615

Most-cited papers

Syndecan–syntenin–ALIX regulates the biogenesis of exosomes
M. Baietti, Zhe Zhang, Eva Mortier, Aurélie Melchior +8 more
2012Nature Cell Biology1,760 citations
Semantic Scholar
Misregulated alternative splicing of BIN1 is associated with T tubule alterations and muscle weakness in myotonic dystrophy
C. Fugier, A. Klein, C. Hammer, S. Vassilopoulos +30 more
2011Nature Medicine324 citations
Semantic Scholar
Plasticity of PDZ domains in ligand recognition and signaling
Y. Ivarsson
2012FEBS Letters146 citations Open access
Semantic Scholar
Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes
Y. Ivarsson, R. Arnold, M. McLaughlin, Satra Nim +9 more
2014Proceedings of the National Academy of Sciences of the United States of America145 citations Open access
Semantic Scholar
Affinity and specificity of motif-based protein-protein interactions.
Y. Ivarsson, P. Jemth
2019Current Opinion in Structural Biology105 citations Open access
Semantic Scholar
Discovery of short linear motif‐mediated interactions through phage display of intrinsically disordered regions of the human proteome
Norman E. Davey, M. Seo, V. K. Yadav, Jouhyun Jeon +7 more
2017The FEBS Journal91 citations Open access
Semantic Scholar
PP2A-B′ holoenzyme substrate recognition, regulation and role in cytokinesis
Cheng-Guo Wu, Hui Chen, F. Guo, V. K. Yadav +17 more
2017Cell Discovery84 citations Open access
Semantic Scholar
A structural portrait of the PDZ domain family.
A. Ernst, B. Appleton, Y. Ivarsson, Yingnan Zhang +3 more
2014Journal of Molecular Biology80 citations
Semantic Scholar
A consensus binding motif for the PP4 protein phosphatase
Y. Ueki, T. Kruse, M. Weisser, G. Sundell +11 more
2019Molecules and Cells76 citations Open access
Semantic Scholar
Cytoplasmic short linear motifs in ACE2 and integrin β3 link SARS-CoV-2 host cell receptors to mediators of endocytosis and autophagy
J. Kliche, Hanna Kuss, Muhammad Ali, Y. Ivarsson
2021Science Signaling75 citations Open access
Semantic Scholar
Systematic discovery of Short Linear Motifs decodes calcineurin phosphatase signaling
Callie P. Wigington, Jagoree Roy, Nikhil P. Damle, V. K. Yadav +17 more
2019bioRxiv75 citations Open access
Semantic Scholar
Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities
T. Kruse, Carolin Benz, D. Garvanska, Richard Lindqvist +18 more
2021Nature Communications73 citations Open access
Semantic Scholar
Identification and characterization of protein folding intermediates.
S. Gianni, Y. Ivarsson, P. Jemth, M. Brunori +1 more
2007Biophysical Chemistry73 citations Open access
Semantic Scholar
Proteome‐scale mapping of binding sites in the unstructured regions of the human proteome
Carolin Benz, Muhammad Ali, Izabella Krystkowiak, L. Simonetti +7 more
2022Molecular Systems Biology67 citations Open access
Semantic Scholar
Proteome‐wide analysis of phospho‐regulated PDZ domain interactions
G. Sundell, R. Arnold, Muhammad Ali, Piangfan Naksukpaiboon +4 more
2018Molecular Systems Biology63 citations Open access
Semantic Scholar
Structural characterization of a misfolded intermediate populated during the folding process of a PDZ domain
S. Gianni, Y. Ivarsson, A. De Simone, C. Travaglini-Allocatelli +2 more
2010Nature Structural &Molecular Biology59 citations
Semantic Scholar
Structural Diversity of PDZ–Lipid Interactions
R. Gallardo, Y. Ivarsson, J. Schymkowitz, F. Rousseau +1 more
2010ChemBioChem54 citations
Semantic Scholar
High-throughput methods for identification of protein-protein interactions involving short linear motifs
Cecilia Blikstad, Y. Ivarsson
2015Cell Communication and Signaling52 citations Open access
Semantic Scholar
Structural basis of Sorcin-mediated calcium-dependent signal transduction
A. Ilari, A. Fiorillo, E. Poser, V. Lalioti +4 more
2015Scientific Reports50 citations Open access
Semantic Scholar
Syntenin, a syndecan adaptor and an Arf6 phosphatidylinositol 4,5-bisphosphate effector, is essential for epiboly and gastrulation cell movements in zebrafish
K. Lambaerts, S. Van Dyck, Eva Mortier, Y. Ivarsson +6 more
2012Journal of Cell Science48 citations Open access
Semantic Scholar
The next wave of interactomics: Mapping the SLiM-based interactions of the intrinsically disordered proteome.
Norman E. Davey, L. Simonetti, Y. Ivarsson
2023Current Opinion in Structural Biology47 citations Open access
Semantic Scholar
Interaction Analysis through Proteomic Phage Display
G. Sundell, Y. Ivarsson
2014BioMed Research International46 citations Open access
Semantic Scholar
Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
Filip Mihalič, L. Simonetti, Girolamo Giudice, Mariel Sander +18 more
2022bioRxiv43 citations Open access
Semantic Scholar
Systematic identification of recognition motifs for the hub protein LC8
N. Jespersen, Aidan B. Estelle, Nathan Waugh, Norman E. Davey +6 more
2019Life Science Alliance41 citations Open access
Semantic Scholar
Frizzled 7 and PIP2 binding by syntenin PDZ2 domain supports Frizzled 7 trafficking and signalling
A. L. Egea-Jimenez, R. Gallardo, A. Garcia-Pino, Y. Ivarsson +6 more
2016Nature Communications39 citations Open access
Semantic Scholar
Pooled screening for anti-proliferative inhibitors of protein-protein interactions
Satra Nim, Jouhyun Jeon, Carles Corbi-Verge, M. Seo +4 more
2016Nature Chemical Biology33 citations Open access
Semantic Scholar
Folding and stability of globular proteins and implications for function.
C. Travaglini-Allocatelli, Y. Ivarsson, P. Jemth, S. Gianni
2009Current Opinion in Structural Biology29 citations
Semantic Scholar
Folding and Misfolding in a Naturally Occurring Circularly Permuted PDZ Domain*
Y. Ivarsson, C. Travaglini-Allocatelli, M. Brunori, S. Gianni
2008Journal of Biological Chemistry29 citations Open access
Semantic Scholar
Mechanism of Na(+) binding to thrombin resolved by ultra-rapid kinetics.
S. Gianni, Y. Ivarsson, Alaji Bah, Leslie A. Bush-Pelc +1 more
2007Biophysical Chemistry29 citations Open access
Semantic Scholar
Selectivity of aggregation-determining interactions.
A. Ganesan, M. Debulpaep, Hannah Wilkinson, J. V. Van Durme +8 more
2015Journal of Molecular Biology28 citations
Semantic Scholar
Extensions of PSD‐95/discs large/ZO‐1 (PDZ) domains influence lipid binding and membrane targeting of syntenin‐1
A. Wawrzyniak, E. Vermeiren, P. Zimmermann, Y. Ivarsson
2012FEBS Letters28 citations
Semantic Scholar
Engineered symmetric connectivity of secondary structure elements highlights malleability of protein folding pathways.
Y. Ivarsson, C. Travaglini-Allocatelli, M. Brunori, S. Gianni
2009Journal of the American Chemical Society28 citations
Semantic Scholar
Orchestrating serine/threonine phosphorylation and elucidating downstream effects by short linear motifs
J. Kliche, Y. Ivarsson
2022Biochemical Journal25 citations Open access
Semantic Scholar
Screening Intrinsically Disordered Regions for Short Linear Binding Motifs.
Muhammad Ali, L. Simonetti, Y. Ivarsson
2020Methods in molecular biology25 citations
Semantic Scholar
Genetically Encoded Cyclic Peptide Phage Display Libraries
L. Simonetti, Y. Ivarsson
2020ACS Central Science25 citations Open access
Semantic Scholar
Large‐scale phosphomimetic screening identifies phospho‐modulated motif‐based protein interactions
J. Kliche, D. Garvanska, L. Simonetti, D. Badgujar +4 more
2023Molecular Systems Biology24 citations Open access
Semantic Scholar
Proteomic peptide phage display uncovers novel interactions of the PDZ1‐2 supramodule of syntenin
S. Garrido‐Urbani, P. Garg, R. Ghossoub, R. Arnold +7 more
2016FEBS Letters24 citations Open access
Semantic Scholar
Prevalence, Specificity and Determinants of Lipid-Interacting PDZ Domains from an In-Cell Screen and In Vitro Binding Experiments
Y. Ivarsson, A. Wawrzyniak, R. Kashyap, J. Polanowska +9 more
2013PLoS ONE24 citations Open access
Semantic Scholar
SLiM-binding pockets: an attractive target for broad-spectrum antivirals.
L. Simonetti, J. Nilsson, G. Mcinerney, Y. Ivarsson +1 more
2023TIBS -Trends in Biochemical Sciences. Regular ed23 citations Open access
Semantic Scholar
Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets
Filip Mihalič, Carolin Benz, Eszter Kassa, Richard Lindqvist +9 more
2022bioRxiv21 citations Open access
Semantic Scholar
The folding pathway of an engineered circularly permuted PDZ domain.
Y. Ivarsson, C. Travaglini-Allocatelli, V. Morea, M. Brunori +1 more
2008Protein engineering, design & selection : PEDS20 citations Open access
Semantic Scholar
Cooperative Phosphoinositide and Peptide Binding by PSD-95/Discs Large/ZO-1 (PDZ) Domain of Polychaetoid, Drosophila Zonulin*
Y. Ivarsson, A. Wawrzyniak, G. Wuytens, M. Kosloff +3 more
2011Journal of Biological Chemistry19 citations Open access
Semantic Scholar
Proteome-scale characterisation of motif-based interactome rewiring by disease mutations
J. Kliche, L. Simonetti, Izabella Krystkowiak, Hanna Kuss +5 more
2024bioRxiv18 citations Open access
Semantic Scholar
Motif-dependent binding on the intervening domain regulates O-GlcNAc transferase
C. Blankenship, Jin-Shan Xie, Carolin Benz, Ao Wang +2 more
2023Nature Chemical Biology18 citations Open access
Semantic Scholar
High-throughput investigation of cyclin docking interactions reveals the complexity of motif binding determinants
Mihkel Örd, Matthew J. Winters, Mythili S. Subbanna, Natàlia de Martín Garrido +7 more
2025Nature Communications17 citations Open access
Semantic Scholar
Mechanisms of protein folding
Y. Ivarsson, C. Travaglini-Allocatelli, M. Brunori, S. Gianni
2008European Biophysics Journal17 citations
Semantic Scholar
A High-Affinity Peptide Ligand Targeting Syntenin Inhibits Glioblastoma.
Linda M. Haugaard-Kedström, Louise S. Clemmensen, V. Sereikaite, Ze-Yu Jin +18 more
2021Journal of Medicinal Chemistry16 citations Open access
Semantic Scholar
Improved affinity at the cost of decreased specificity: a recurring theme in PDZ-peptide interactions
O. A. Karlsson, G. Sundell, Eva Andersson, Y. Ivarsson +1 more
2016Scientific Reports16 citations Open access
Semantic Scholar
Integrated analysis of Shank1 PDZ interactions with C-terminal and internal binding motifs
Muhammad Ali, M. M. McAuley, Susanne Lüchow, S. Knapp +2 more
2021Current Research in Structural Biology14 citations Open access
Semantic Scholar
A ZO-1/α5β1-Integrin Complex Regulates Cytokinesis Downstream of PKCε in NCI-H460 Cells Plated on Fibronectin
Saara Hämälistö, J. Pouwels, N. de Franceschi, Markku Saari +5 more
2013PLoS ONE13 citations Open access
Semantic Scholar

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Norman E. Davey×11
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S. Gianni — researcher profile on SciRah

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